Gene annotation
Transcriptome id Sobic.010G245200.1
Synonym Sb10g028450
Functional annotation expressed protein
UniProt C5Z8S1
Pfam PF07466
Panther DB PTHR37768
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57345 : -
RAP-DB (Rice) LOC_Os06g47970.1 : expressed protein
MaizeGDB (Corn) Zm00025a018286
Brachypodium KQK17326
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G245200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
2 Sobic.002G370600 - -
3 Sobic.001G005200 expressed protein -
4 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
5 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
7 Sobic.006G188000 expressed protein -
8 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
9 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
10 Sobic.009G043000 thioredoxin, putative, expressed -
11 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
12 Sobic.001G500700 expressed protein -
13 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
14 Sobic.007G207800 thylakoid lumen protein, chloroplast precursor, putative, expressed -
15 Sobic.007G223500 expressed protein -
16 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
17 Sobic.002G030500 Reticulon family protein(PubMedID : 26465154)@reticulon domain containing protein, putative, expressed -
18 Sobic.008G134800 shikimate kinase, putative, expressed -
19 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
20 Sobic.001G519800 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K05298: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)


Gene co-expression network
sample Sobic010G245200 Sobic010G245200 Sobic007G053800 Sobic007G053800 Sobic010G245200--Sobic007G053800 Sobic002G370600 Sobic002G370600 Sobic010G245200--Sobic002G370600 Sobic001G005200 Sobic001G005200 Sobic010G245200--Sobic001G005200 Sobic003G431700 Sobic003G431700 Sobic010G245200--Sobic003G431700 Sobic009G140600 Sobic009G140600 Sobic010G245200--Sobic009G140600 Sobic001G122300 Sobic001G122300 Sobic010G245200--Sobic001G122300 Sobic006G188000 Sobic006G188000 Sobic010G245200--Sobic006G188000 Sobic003G378600 Sobic003G378600 Sobic010G245200--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic010G245200--Sobic008G102000 Sobic007G053800--Sobic010G245200 Sobic006G265900 Sobic006G265900 Sobic007G053800--Sobic006G265900 Sobic007G053800--Sobic003G431700 Sobic001G128600 Sobic001G128600 Sobic007G053800--Sobic001G128600 Sobic007G053800--Sobic001G122300 Sobic001G500700 Sobic001G500700 Sobic007G053800--Sobic001G500700 Sobic007G053800--Sobic002G370600 Sobic003G148200 Sobic003G148200 Sobic007G053800--Sobic003G148200 Sobic007G053800--Sobic006G188000 Sobic004G305800 Sobic004G305800 Sobic002G370600--Sobic004G305800 Sobic001G491000 Sobic001G491000 Sobic002G370600--Sobic001G491000 Sobic010G181300 Sobic010G181300 Sobic002G370600--Sobic010G181300 Sobic006G238200 Sobic006G238200 Sobic002G370600--Sobic006G238200 Sobic002G370600--Sobic010G245200 Sobic002G370600--Sobic003G431700 Sobic001G289500 Sobic001G289500 Sobic002G370600--Sobic001G289500 Sobic003G370000 Sobic003G370000 Sobic002G370600--Sobic003G370000 Sobic009G043000 Sobic009G043000 Sobic002G370600--Sobic009G043000 Sobic001G005200--Sobic003G378600 Sobic001G005200--Sobic001G128600 Sobic001G005200--Sobic008G102000 Sobic001G005200--Sobic009G140600 Sobic009G175500 Sobic009G175500 Sobic001G005200--Sobic009G175500 Sobic001G005200--Sobic010G245200 Sobic002G233700 Sobic002G233700 Sobic001G005200--Sobic002G233700 Sobic003G387100 Sobic003G387100 Sobic001G005200--Sobic003G387100 Sobic001G005200--Sobic001G122300 Sobic001G519800 Sobic001G519800 Sobic003G431700--Sobic001G519800 Sobic003G398800 Sobic003G398800 Sobic003G431700--Sobic003G398800 Sobic006G207800 Sobic006G207800 Sobic003G431700--Sobic006G207800 Sobic003G431700--Sobic002G370600 Sobic003G431700--Sobic006G238200 Sobic004G308700 Sobic004G308700 Sobic003G431700--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431700--Sobic004G272100 Sobic003G431700--Sobic010G181300 Sobic001G102800 Sobic001G102800 Sobic003G431700--Sobic001G102800 Sobic003G002300 Sobic003G002300 Sobic009G140600--Sobic003G002300 Sobic009G140600--Sobic008G102000 Sobic009G140600--Sobic003G378600 Sobic003G387800 Sobic003G387800 Sobic009G140600--Sobic003G387800 Sobic009G140600--Sobic001G122300 Sobic005G194100 Sobic005G194100 Sobic009G140600--Sobic005G194100 Sobic007G052400 Sobic007G052400 Sobic009G140600--Sobic007G052400 Sobic009G140600--Sobic001G005200 Sobic009G140600--Sobic009G043000 Sobic001G122300--Sobic001G128600 Sobic001G122300--Sobic009G140600 Sobic001G122300--Sobic003G378600 Sobic001G122300--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic001G122300--Sobic004G012900 Sobic002G112400 Sobic002G112400 Sobic001G122300--Sobic002G112400 Sobic001G122300--Sobic010G245200 Sobic001G122300--Sobic003G002300 Sobic001G122300--Sobic006G265900 Sobic006G188000--Sobic010G245200 Sobic010G058200 Sobic010G058200 Sobic006G188000--Sobic010G058200 Sobic006G114900 Sobic006G114900 Sobic006G188000--Sobic006G114900 Sobic006G188000--Sobic002G370600 Sobic006G188000--Sobic003G431700 Sobic006G188000--Sobic007G053800 Sobic001G517700 Sobic001G517700 Sobic006G188000--Sobic001G517700 Sobic006G188000--Sobic006G207800 Sobic006G102000 Sobic006G102000 Sobic006G188000--Sobic006G102000 Sobic003G378600--Sobic009G140600 Sobic003G378600--Sobic001G005200 Sobic003G378600--Sobic004G012900 Sobic003G378600--Sobic008G102000 Sobic003G378600--Sobic001G122300 Sobic004G239100 Sobic004G239100 Sobic003G378600--Sobic004G239100 Sobic004G359600 Sobic004G359600 Sobic003G378600--Sobic004G359600 Sobic003G378600--Sobic002G233700 Sobic008G172700 Sobic008G172700 Sobic003G378600--Sobic008G172700 Sobic008G102000--Sobic003G002300 Sobic008G102000--Sobic009G140600 Sobic008G102000--Sobic009G043000 Sobic007G225500 Sobic007G225500 Sobic008G102000--Sobic007G225500 Sobic002G051100 Sobic002G051100 Sobic008G102000--Sobic002G051100 Sobic008G102000--Sobic004G272100 Sobic007G173800 Sobic007G173800 Sobic008G102000--Sobic007G173800 Sobic008G102000--Sobic007G052400 Sobic008G102000--Sobic003G378600
Octagon: transcription factors


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