Gene annotation
Transcriptome id Sobic.001G500700.2,Sobic.001G500700.1
Synonym Sb01g046780
Functional annotation expressed protein
UniProt A0A1Z5SBT6 , C5WXU9
Pfam -
Panther DB PTHR36739
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36895 : -
RAP-DB (Rice) LOC_Os03g05800.1 : expressed protein
MaizeGDB (Corn) Zm00025a053436
Brachypodium PNT78177 , PNT78178
Barley -
Wheat TraesCS4A02G036400 , TraesCS4D02G268500 , TraesCS4B02G269300 , TraesCS4B02G269300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
2 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
3 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
4 Sobic.010G245200 expressed protein -
5 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
6 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
7 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
8 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
9 Sobic.007G108900 APE1, putative, expressed -
10 Sobic.002G370600 - -
11 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
12 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
13 Sobic.001G005200 expressed protein -
14 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
15 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
16 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
17 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
19 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
20 Sobic.007G181400 TraB family protein, putative, expressed -


Gene co-expression network
sample Sobic001G500700 Sobic001G500700 Sobic006G265900 Sobic006G265900 Sobic001G500700--Sobic006G265900 Sobic007G053800 Sobic007G053800 Sobic001G500700--Sobic007G053800 Sobic006G097500 Sobic006G097500 Sobic001G500700--Sobic006G097500 Sobic010G245200 Sobic010G245200 Sobic001G500700--Sobic010G245200 Sobic002G298800 Sobic002G298800 Sobic001G500700--Sobic002G298800 Sobic006G102000 Sobic006G102000 Sobic001G500700--Sobic006G102000 Sobic001G122300 Sobic001G122300 Sobic001G500700--Sobic001G122300 Sobic010G181300 Sobic010G181300 Sobic001G500700--Sobic010G181300 Sobic007G108900 Sobic007G108900 Sobic001G500700--Sobic007G108900 Sobic001G128600 Sobic001G128600 Sobic006G265900--Sobic001G128600 Sobic006G265900--Sobic006G097500 Sobic002G061900 Sobic002G061900 Sobic006G265900--Sobic002G061900 Sobic003G148200 Sobic003G148200 Sobic006G265900--Sobic003G148200 Sobic006G265900--Sobic002G298800 Sobic002G112400 Sobic002G112400 Sobic006G265900--Sobic002G112400 Sobic007G169100 Sobic007G169100 Sobic006G265900--Sobic007G169100 Sobic006G265900--Sobic007G053800 Sobic004G359600 Sobic004G359600 Sobic006G265900--Sobic004G359600 Sobic007G053800--Sobic010G245200 Sobic007G053800--Sobic006G265900 Sobic003G431700 Sobic003G431700 Sobic007G053800--Sobic003G431700 Sobic007G053800--Sobic001G128600 Sobic007G053800--Sobic001G122300 Sobic007G053800--Sobic001G500700 Sobic002G370600 Sobic002G370600 Sobic007G053800--Sobic002G370600 Sobic007G053800--Sobic003G148200 Sobic006G188000 Sobic006G188000 Sobic007G053800--Sobic006G188000 Sobic006G097500--Sobic002G061900 Sobic006G097500--Sobic002G298800 Sobic004G103300 Sobic004G103300 Sobic006G097500--Sobic004G103300 Sobic006G097500--Sobic006G265900 Sobic001G368600 Sobic001G368600 Sobic006G097500--Sobic001G368600 Sobic010G231500 Sobic010G231500 Sobic006G097500--Sobic010G231500 Sobic006G097500--Sobic007G169100 Sobic005G005400 Sobic005G005400 Sobic006G097500--Sobic005G005400 Sobic005G028800 Sobic005G028800 Sobic006G097500--Sobic005G028800 Sobic010G245200--Sobic007G053800 Sobic010G245200--Sobic002G370600 Sobic001G005200 Sobic001G005200 Sobic010G245200--Sobic001G005200 Sobic010G245200--Sobic003G431700 Sobic009G140600 Sobic009G140600 Sobic010G245200--Sobic009G140600 Sobic010G245200--Sobic001G122300 Sobic010G245200--Sobic006G188000 Sobic003G378600 Sobic003G378600 Sobic010G245200--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic010G245200--Sobic008G102000 Sobic001G393300 Sobic001G393300 Sobic002G298800--Sobic001G393300 Sobic002G198300 Sobic002G198300 Sobic002G298800--Sobic002G198300 Sobic002G298800--Sobic004G103300 Sobic007G103400 Sobic007G103400 Sobic002G298800--Sobic007G103400 Sobic002G298800--Sobic006G097500 Sobic002G298800--Sobic001G368600 Sobic003G094100 Sobic003G094100 Sobic002G298800--Sobic003G094100 Sobic004G353100 Sobic004G353100 Sobic002G298800--Sobic004G353100 Sobic002G275300 Sobic002G275300 Sobic002G298800--Sobic002G275300 Sobic006G102000--Sobic007G108900 Sobic009G237000 Sobic009G237000 Sobic006G102000--Sobic009G237000 Sobic001G289500 Sobic001G289500 Sobic006G102000--Sobic001G289500 Sobic006G102000--Sobic003G094100 Sobic006G102000--Sobic010G181300 Sobic006G102000--Sobic002G275300 Sobic001G491000 Sobic001G491000 Sobic006G102000--Sobic001G491000 Sobic006G207800 Sobic006G207800 Sobic006G102000--Sobic006G207800 Sobic004G303200 Sobic004G303200 Sobic006G102000--Sobic004G303200 Sobic001G122300--Sobic001G128600 Sobic001G122300--Sobic009G140600 Sobic001G122300--Sobic003G378600 Sobic001G122300--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic001G122300--Sobic004G012900 Sobic001G122300--Sobic002G112400 Sobic001G122300--Sobic010G245200 Sobic003G002300 Sobic003G002300 Sobic001G122300--Sobic003G002300 Sobic001G122300--Sobic006G265900 Sobic010G181300--Sobic001G491000 Sobic010G181300--Sobic002G275300 Sobic006G238200 Sobic006G238200 Sobic010G181300--Sobic006G238200 Sobic010G181300--Sobic007G108900 Sobic009G129300 Sobic009G129300 Sobic010G181300--Sobic009G129300 Sobic010G181300--Sobic001G289500 Sobic010G181300--Sobic006G102000 Sobic010G181300--Sobic002G370600 Sobic003G398800 Sobic003G398800 Sobic010G181300--Sobic003G398800 Sobic007G108900--Sobic003G094100 Sobic001G509200 Sobic001G509200 Sobic007G108900--Sobic001G509200 Sobic007G108900--Sobic004G103300 Sobic007G108900--Sobic001G393300 Sobic007G108900--Sobic006G102000 Sobic001G283100 Sobic001G283100 Sobic007G108900--Sobic001G283100 Sobic007G108900--Sobic010G181300 Sobic007G166300 Sobic007G166300 Sobic007G108900--Sobic007G166300 Sobic007G108900--Sobic002G298800
Octagon: transcription factors


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