Gene annotation
Transcriptome id Sobic.001G005200.2,Sobic.001G005200.4,Sobic.001G005200.3
Synonym PGR5-LIKEA, Sb01g000570
Functional annotation expressed protein
UniProt A0A1B6QGN6
Pfam -
Panther DB PTHR31032 PTHR31032:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22890 : PGR5-LIKE A
RAP-DB (Rice) LOC_Os03g64020.2 : expressed protein
MaizeGDB (Corn) Zm00025a009113 , Zm00025a009115 , Zm00025a045703
Brachypodium KQK12005
Barley HORVU5Hr1G124210.7 , HORVU5Hr1G124210.6 , HORVU5Hr1G124210.5 , HORVU5Hr1G124210.4 , HORVU5Hr1G124210.3 , HORVU5Hr1G124210.2 , HORVU5Hr1G124210.1 , HORVU5Hr1G124210.9 , HORVU5Hr1G124210.8 , HORVU5Hr1G124210.11 , HORVU5Hr1G124210.10
Wheat TraesCS4A02G319000 , TraesCS4A02G319000 , TraesCS5B02G560400 , TraesCS5B02G560400 , TraesCS5D02G569800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
2 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
3 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
4 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.009G175500 acetyltransferase, GNAT family, putative, expressed -
6 Sobic.010G245200 expressed protein -
7 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
8 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
9 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
10 Sobic.004G012900 expressed protein -
11 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
12 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
13 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
14 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
15 Sobic.010G035400 expressed protein -
16 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
17 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
18 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
19 Sobic.007G225500 expressed protein -
20 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G005200 Sobic001G005200 Sobic003G378600 Sobic003G378600 Sobic001G005200--Sobic003G378600 Sobic001G128600 Sobic001G128600 Sobic001G005200--Sobic001G128600 Sobic008G102000 Sobic008G102000 Sobic001G005200--Sobic008G102000 Sobic009G140600 Sobic009G140600 Sobic001G005200--Sobic009G140600 Sobic009G175500 Sobic009G175500 Sobic001G005200--Sobic009G175500 Sobic010G245200 Sobic010G245200 Sobic001G005200--Sobic010G245200 Sobic002G233700 Sobic002G233700 Sobic001G005200--Sobic002G233700 Sobic003G387100 Sobic003G387100 Sobic001G005200--Sobic003G387100 Sobic001G122300 Sobic001G122300 Sobic001G005200--Sobic001G122300 Sobic003G378600--Sobic009G140600 Sobic003G378600--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic003G378600--Sobic004G012900 Sobic003G378600--Sobic008G102000 Sobic003G378600--Sobic001G122300 Sobic004G239100 Sobic004G239100 Sobic003G378600--Sobic004G239100 Sobic004G359600 Sobic004G359600 Sobic003G378600--Sobic004G359600 Sobic003G378600--Sobic002G233700 Sobic008G172700 Sobic008G172700 Sobic003G378600--Sobic008G172700 Sobic002G112400 Sobic002G112400 Sobic001G128600--Sobic002G112400 Sobic006G265900 Sobic006G265900 Sobic001G128600--Sobic006G265900 Sobic008G006100 Sobic008G006100 Sobic001G128600--Sobic008G006100 Sobic001G128600--Sobic001G122300 Sobic001G128600--Sobic001G005200 Sobic005G100300 Sobic005G100300 Sobic001G128600--Sobic005G100300 Sobic002G298800 Sobic002G298800 Sobic001G128600--Sobic002G298800 Sobic001G128600--Sobic009G175500 Sobic006G097500 Sobic006G097500 Sobic001G128600--Sobic006G097500 Sobic003G002300 Sobic003G002300 Sobic008G102000--Sobic003G002300 Sobic008G102000--Sobic009G140600 Sobic009G043000 Sobic009G043000 Sobic008G102000--Sobic009G043000 Sobic007G225500 Sobic007G225500 Sobic008G102000--Sobic007G225500 Sobic002G051100 Sobic002G051100 Sobic008G102000--Sobic002G051100 Sobic004G272100 Sobic004G272100 Sobic008G102000--Sobic004G272100 Sobic007G173800 Sobic007G173800 Sobic008G102000--Sobic007G173800 Sobic007G052400 Sobic007G052400 Sobic008G102000--Sobic007G052400 Sobic008G102000--Sobic003G378600 Sobic009G140600--Sobic003G002300 Sobic009G140600--Sobic008G102000 Sobic009G140600--Sobic003G378600 Sobic003G387800 Sobic003G387800 Sobic009G140600--Sobic003G387800 Sobic009G140600--Sobic001G122300 Sobic005G194100 Sobic005G194100 Sobic009G140600--Sobic005G194100 Sobic009G140600--Sobic007G052400 Sobic009G140600--Sobic001G005200 Sobic009G140600--Sobic009G043000 Sobic009G175500--Sobic001G005200 Sobic004G336200 Sobic004G336200 Sobic009G175500--Sobic004G336200 Sobic009G175500--Sobic001G128600 Sobic003G160800 Sobic003G160800 Sobic009G175500--Sobic003G160800 Sobic009G175500--Sobic003G387100 Sobic001G500600 Sobic001G500600 Sobic009G175500--Sobic001G500600 Sobic001G283700 Sobic001G283700 Sobic009G175500--Sobic001G283700 Sobic001G126300 Sobic001G126300 Sobic009G175500--Sobic001G126300 Sobic010G035400 Sobic010G035400 Sobic009G175500--Sobic010G035400 Sobic007G053800 Sobic007G053800 Sobic010G245200--Sobic007G053800 Sobic002G370600 Sobic002G370600 Sobic010G245200--Sobic002G370600 Sobic010G245200--Sobic001G005200 Sobic003G431700 Sobic003G431700 Sobic010G245200--Sobic003G431700 Sobic010G245200--Sobic009G140600 Sobic010G245200--Sobic001G122300 Sobic006G188000 Sobic006G188000 Sobic010G245200--Sobic006G188000 Sobic010G245200--Sobic003G378600 Sobic010G245200--Sobic008G102000 Sobic008G171300 Sobic008G171300 Sobic002G233700--Sobic008G171300 Sobic002G233700--Sobic004G012900 Sobic004G303200 Sobic004G303200 Sobic002G233700--Sobic004G303200 Sobic002G233700--Sobic007G052400 Sobic002G233700--Sobic007G225500 Sobic002G233700--Sobic001G005200 Sobic002G233700--Sobic003G002300 Sobic002G401800 Sobic002G401800 Sobic002G233700--Sobic002G401800 Sobic002G233700--Sobic003G378600 Sobic009G059300 Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic003G387100--Sobic010G035400 Sobic001G122300--Sobic001G128600 Sobic001G122300--Sobic009G140600 Sobic001G122300--Sobic003G378600 Sobic001G122300--Sobic001G005200 Sobic001G122300--Sobic004G012900 Sobic001G122300--Sobic002G112400 Sobic001G122300--Sobic010G245200 Sobic001G122300--Sobic003G002300 Sobic001G122300--Sobic006G265900
Octagon: transcription factors


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