Gene annotation
Transcriptome id Sobic.002G112400.4,Sobic.002G112400.1,Sobic.002G112400.5,Sobic.002G112400.2
Synonym PGR5-LIKEA, Sb02g009610
Functional annotation PGR5-LIKE A (PubMedID : 26465154)
expressed protein
UniProt A0A1B6QAJ9 , A0A1W0W3F1 , A0A1B6QAN2
Pfam -
Panther DB PTHR31032 PTHR31032:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22890 : PGR5-LIKE A
RAP-DB (Rice) LOC_Os08g41460.2,LOC_Os08g41460.10 : expressed protein
MaizeGDB (Corn) Zm00025a045703
Brachypodium KQK20115 , KQK20117 , KQK20116 , KQK12005 , PNT76738
Barley HORVU5Hr1G124210.11 , HORVU5Hr1G124210.6 , HORVU5Hr1G124210.5 , HORVU5Hr1G124210.4 , HORVU5Hr1G124210.3 , HORVU5Hr1G124210.2 , HORVU5Hr1G124210.1 , HORVU5Hr1G124210.9 , HORVU5Hr1G124210.8 , HORVU5Hr1G124210.7 , HORVU5Hr1G124210.10
Wheat TraesCS4A02G319000 , TraesCS4A02G319000 , TraesCS5B02G560400 , TraesCS5B02G560400 , TraesCS5D02G569800
Populus -


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cDNA sequences
Sobic.002G112400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
2 Sobic.008G006100 MATE efflux protein, putative, expressed -
3 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
5 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
6 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
7 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3
8 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
9 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
10 Sobic.004G012900 expressed protein -
11 Sobic.007G103400 expressed protein -
12 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
13 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
14 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
15 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
16 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
17 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
18 Sobic.001G005200 expressed protein -
19 Sobic.003G233700 SET domain-containing protein, putative, expressed -
20 Sobic.005G100300 OsClp12 - Putative Clp protease homologue, expressed -


Gene co-expression network
sample Sobic002G112400 Sobic002G112400 Sobic001G128600 Sobic001G128600 Sobic002G112400--Sobic001G128600 Sobic008G006100 Sobic008G006100 Sobic002G112400--Sobic008G006100 Sobic003G160800 Sobic003G160800 Sobic002G112400--Sobic003G160800 Sobic009G062400 Sobic009G062400 Sobic002G112400--Sobic009G062400 Sobic006G265900 Sobic006G265900 Sobic002G112400--Sobic006G265900 Sobic001G122300 Sobic001G122300 Sobic002G112400--Sobic001G122300 Sobic009G056700 Sobic009G056700 Sobic002G112400--Sobic009G056700 Sobic009G237000 Sobic009G237000 Sobic002G112400--Sobic009G237000 Sobic003G387100 Sobic003G387100 Sobic002G112400--Sobic003G387100 Sobic001G128600--Sobic002G112400 Sobic001G128600--Sobic006G265900 Sobic001G128600--Sobic008G006100 Sobic001G128600--Sobic001G122300 Sobic001G005200 Sobic001G005200 Sobic001G128600--Sobic001G005200 Sobic005G100300 Sobic005G100300 Sobic001G128600--Sobic005G100300 Sobic002G298800 Sobic002G298800 Sobic001G128600--Sobic002G298800 Sobic009G175500 Sobic009G175500 Sobic001G128600--Sobic009G175500 Sobic006G097500 Sobic006G097500 Sobic001G128600--Sobic006G097500 Sobic008G006100--Sobic002G112400 Sobic008G006100--Sobic001G128600 Sobic008G006100--Sobic009G062400 Sobic001G500600 Sobic001G500600 Sobic008G006100--Sobic001G500600 Sobic003G070900 Sobic003G070900 Sobic008G006100--Sobic003G070900 Sobic008G006100--Sobic009G237000 Sobic001G134700 Sobic001G134700 Sobic008G006100--Sobic001G134700 Sobic003G233700 Sobic003G233700 Sobic008G006100--Sobic003G233700 Sobic007G103400 Sobic007G103400 Sobic008G006100--Sobic007G103400 Sobic004G336200 Sobic004G336200 Sobic003G160800--Sobic004G336200 Sobic003G160800--Sobic005G100300 Sobic010G035400 Sobic010G035400 Sobic003G160800--Sobic010G035400 Sobic003G160800--Sobic003G387100 Sobic003G160800--Sobic007G103400 Sobic003G160800--Sobic002G112400 Sobic003G160800--Sobic003G233700 Sobic003G160800--Sobic001G134700 Sobic003G160800--Sobic009G175500 Sobic009G062400--Sobic008G006100 Sobic009G062400--Sobic002G112400 Sobic009G207900 Sobic009G207900 Sobic009G062400--Sobic009G207900 Sobic009G219100 Sobic009G219100 Sobic009G062400--Sobic009G219100 Sobic003G037300 Sobic003G037300 Sobic009G062400--Sobic003G037300 Sobic004G154400 Sobic004G154400 Sobic009G062400--Sobic004G154400 Sobic001G286600 Sobic001G286600 Sobic009G062400--Sobic001G286600 Sobic003G345500 Sobic003G345500 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800 Sobic006G265900--Sobic001G128600 Sobic006G265900--Sobic006G097500 Sobic002G061900 Sobic002G061900 Sobic006G265900--Sobic002G061900 Sobic003G148200 Sobic003G148200 Sobic006G265900--Sobic003G148200 Sobic006G265900--Sobic002G298800 Sobic006G265900--Sobic002G112400 Sobic007G169100 Sobic007G169100 Sobic006G265900--Sobic007G169100 Sobic007G053800 Sobic007G053800 Sobic006G265900--Sobic007G053800 Sobic004G359600 Sobic004G359600 Sobic006G265900--Sobic004G359600 Sobic001G122300--Sobic001G128600 Sobic009G140600 Sobic009G140600 Sobic001G122300--Sobic009G140600 Sobic003G378600 Sobic003G378600 Sobic001G122300--Sobic003G378600 Sobic001G122300--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic001G122300--Sobic004G012900 Sobic001G122300--Sobic002G112400 Sobic010G245200 Sobic010G245200 Sobic001G122300--Sobic010G245200 Sobic003G002300 Sobic003G002300 Sobic001G122300--Sobic003G002300 Sobic001G122300--Sobic006G265900 Sobic003G398800 Sobic003G398800 Sobic009G056700--Sobic003G398800 Sobic003G431700 Sobic003G431700 Sobic009G056700--Sobic003G431700 Sobic009G056700--Sobic002G112400 Sobic009G056700--Sobic007G103400 Sobic003G306200 Sobic003G306200 Sobic009G056700--Sobic003G306200 Sobic009G056700--Sobic008G006100 Sobic002G275300 Sobic002G275300 Sobic009G056700--Sobic002G275300 Sobic009G056700--Sobic002G298800 Sobic009G056700--Sobic001G128600 Sobic009G237000--Sobic007G103400 Sobic004G353100 Sobic004G353100 Sobic009G237000--Sobic004G353100 Sobic006G102000 Sobic006G102000 Sobic009G237000--Sobic006G102000 Sobic009G237000--Sobic002G298800 Sobic009G237000--Sobic010G035400 Sobic001G504400 Sobic001G504400 Sobic009G237000--Sobic001G504400 Sobic009G237000--Sobic003G233700 Sobic007G108900 Sobic007G108900 Sobic009G237000--Sobic007G108900 Sobic008G074000 Sobic008G074000 Sobic009G237000--Sobic008G074000 Sobic009G059300 Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic003G387100--Sobic010G035400
Octagon: transcription factors


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