Gene annotation
Transcriptome id Sobic.002G298800.1
Synonym Sb02g032940
Functional annotation PAP fibrillin family domain containing protein, expressed
UniProt C5X8E2
Pfam PF04755
Panther DB PTHR31906 PTHR31906:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G51110 : Plastid-lipid associated protein PAP / fibrillin family protein
RAP-DB (Rice) LOC_Os07g28790.1 : PAP fibrillin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047849
Brachypodium -
Barley -
Wheat TraesCS2B02G455900 , TraesCS2A02G434800 , TraesCS2D02G432600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
2 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
4 Sobic.007G103400 expressed protein -
5 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
6 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
7 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
9 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
10 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
11 Sobic.007G108900 APE1, putative, expressed -
12 Sobic.007G166300 PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
13 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
14 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
15 Sobic.001G504400 expressed protein -
16 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
17 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
18 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
19 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
20 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic002G298800 Sobic002G298800 Sobic001G393300 Sobic001G393300 Sobic002G298800--Sobic001G393300 Sobic002G198300 Sobic002G198300 Sobic002G298800--Sobic002G198300 Sobic004G103300 Sobic004G103300 Sobic002G298800--Sobic004G103300 Sobic007G103400 Sobic007G103400 Sobic002G298800--Sobic007G103400 Sobic006G097500 Sobic006G097500 Sobic002G298800--Sobic006G097500 Sobic001G368600 Sobic001G368600 Sobic002G298800--Sobic001G368600 Sobic003G094100 Sobic003G094100 Sobic002G298800--Sobic003G094100 Sobic004G353100 Sobic004G353100 Sobic002G298800--Sobic004G353100 Sobic002G275300 Sobic002G275300 Sobic002G298800--Sobic002G275300 Sobic001G393300--Sobic002G298800 Sobic007G166300 Sobic007G166300 Sobic001G393300--Sobic007G166300 Sobic001G509200 Sobic001G509200 Sobic001G393300--Sobic001G509200 Sobic001G393300--Sobic004G103300 Sobic001G393300--Sobic003G094100 Sobic007G108900 Sobic007G108900 Sobic001G393300--Sobic007G108900 Sobic001G393300--Sobic002G198300 Sobic007G135800 Sobic007G135800 Sobic001G393300--Sobic007G135800 Sobic002G072500 Sobic002G072500 Sobic001G393300--Sobic002G072500 Sobic002G198300--Sobic002G298800 Sobic002G198300--Sobic001G393300 Sobic002G198300--Sobic007G103400 Sobic002G198300--Sobic001G368600 Sobic010G125833 Sobic010G125833 Sobic002G198300--Sobic010G125833 Sobic001G504400 Sobic001G504400 Sobic002G198300--Sobic001G504400 Sobic001G378100 Sobic001G378100 Sobic002G198300--Sobic001G378100 Sobic003G306200 Sobic003G306200 Sobic002G198300--Sobic003G306200 Sobic001G536700 Sobic001G536700 Sobic002G198300--Sobic001G536700 Sobic004G103300--Sobic001G509200 Sobic004G103300--Sobic007G166300 Sobic004G103300--Sobic001G393300 Sobic004G103300--Sobic001G368600 Sobic004G103300--Sobic002G298800 Sobic004G103300--Sobic007G108900 Sobic004G103300--Sobic006G097500 Sobic005G028800 Sobic005G028800 Sobic004G103300--Sobic005G028800 Sobic004G103300--Sobic007G135800 Sobic009G237000 Sobic009G237000 Sobic007G103400--Sobic009G237000 Sobic007G103400--Sobic002G298800 Sobic007G103400--Sobic004G353100 Sobic010G035400 Sobic010G035400 Sobic007G103400--Sobic010G035400 Sobic007G103400--Sobic001G504400 Sobic007G103400--Sobic003G306200 Sobic007G103400--Sobic002G198300 Sobic003G233700 Sobic003G233700 Sobic007G103400--Sobic003G233700 Sobic007G103400--Sobic002G275300 Sobic002G061900 Sobic002G061900 Sobic006G097500--Sobic002G061900 Sobic006G097500--Sobic002G298800 Sobic006G097500--Sobic004G103300 Sobic006G265900 Sobic006G265900 Sobic006G097500--Sobic006G265900 Sobic006G097500--Sobic001G368600 Sobic010G231500 Sobic010G231500 Sobic006G097500--Sobic010G231500 Sobic007G169100 Sobic007G169100 Sobic006G097500--Sobic007G169100 Sobic005G005400 Sobic005G005400 Sobic006G097500--Sobic005G005400 Sobic006G097500--Sobic005G028800 Sobic001G368600--Sobic004G103300 Sobic001G368600--Sobic006G097500 Sobic001G368600--Sobic002G298800 Sobic001G368600--Sobic001G393300 Sobic001G368600--Sobic007G135800 Sobic001G368600--Sobic002G072500 Sobic001G368600--Sobic002G198300 Sobic001G368600--Sobic007G166300 Sobic006G025500 Sobic006G025500 Sobic001G368600--Sobic006G025500 Sobic003G094100--Sobic007G108900 Sobic003G094100--Sobic001G509200 Sobic003G094100--Sobic007G135800 Sobic003G094100--Sobic001G393300 Sobic001G283100 Sobic001G283100 Sobic003G094100--Sobic001G283100 Sobic007G157300 Sobic007G157300 Sobic003G094100--Sobic007G157300 Sobic003G094100--Sobic004G103300 Sobic001G180200 Sobic001G180200 Sobic003G094100--Sobic001G180200 Sobic003G094100--Sobic002G298800 Sobic004G353100--Sobic007G103400 Sobic004G353100--Sobic009G237000 Sobic002G133900 Sobic002G133900 Sobic004G353100--Sobic002G133900 Sobic004G353100--Sobic002G298800 Sobic004G353100--Sobic010G035400 Sobic003G070900 Sobic003G070900 Sobic004G353100--Sobic003G070900 Sobic004G353100--Sobic003G233700 Sobic009G132000 Sobic009G132000 Sobic004G353100--Sobic009G132000 Sobic009G170200 Sobic009G170200 Sobic004G353100--Sobic009G170200 Sobic006G238200 Sobic006G238200 Sobic002G275300--Sobic006G238200 Sobic010G181300 Sobic010G181300 Sobic002G275300--Sobic010G181300 Sobic001G491000 Sobic001G491000 Sobic002G275300--Sobic001G491000 Sobic002G275300--Sobic002G298800 Sobic002G275300--Sobic007G108900 Sobic007G225500 Sobic007G225500 Sobic002G275300--Sobic007G225500 Sobic002G275300--Sobic007G103400 Sobic002G275300--Sobic010G035400 Sobic002G275300--Sobic003G306200
Octagon: transcription factors


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