Gene annotation
Transcriptome id Sobic.001G504400.5,Sobic.001G504400.6,Sobic.001G504400.4
Synonym Sb01g047110
Functional annotation expressed protein
UniProt A0A1Z5SBH6
Pfam PF09366
Panther DB PTHR34131 PTHR34131:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G04440 : Protein of unknown function (DUF1997)
RAP-DB (Rice) LOC_Os03g05320.2 : expressed protein
MaizeGDB (Corn) Zm00025a000627
Brachypodium KQK23664
Barley HORVU4Hr1G079400.4 , HORVU4Hr1G079400.5 , HORVU4Hr1G079400.2 , HORVU4Hr1G079400.3 , HORVU4Hr1G079400.1
Wheat TraesCS4D02G309400 , TraesCS4D02G309400 , TraesCS4B02G311600 , TraesCS4B02G311600 , TraesCS4A02G411500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
2 Sobic.007G103400 expressed protein -
3 Sobic.009G038701 - -
4 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
5 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.010G125833 - -
7 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
8 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
9 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
10 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G207900 expressed protein -
12 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
13 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
15 Sobic.001G536700 expressed protein -
16 Sobic.003G398800 expressed protein -
17 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
18 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
19 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I


Gene co-expression network
sample Sobic001G504400 Sobic001G504400 Sobic002G206300 Sobic002G206300 Sobic001G504400--Sobic002G206300 Sobic007G103400 Sobic007G103400 Sobic001G504400--Sobic007G103400 Sobic009G038701 Sobic009G038701 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G258200 Sobic001G258200 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic008G033000 Sobic008G033000 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G378100 Sobic001G378100 Sobic001G504400--Sobic001G378100 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic001G536700 Sobic001G536700 Sobic002G206300--Sobic001G536700 Sobic009G207900 Sobic009G207900 Sobic002G206300--Sobic009G207900 Sobic002G206300--Sobic001G258200 Sobic008G129900 Sobic008G129900 Sobic002G206300--Sobic008G129900 Sobic001G217900 Sobic001G217900 Sobic002G206300--Sobic001G217900 Sobic003G341300 Sobic003G341300 Sobic002G206300--Sobic003G341300 Sobic009G237000 Sobic009G237000 Sobic007G103400--Sobic009G237000 Sobic002G298800 Sobic002G298800 Sobic007G103400--Sobic002G298800 Sobic004G353100 Sobic004G353100 Sobic007G103400--Sobic004G353100 Sobic010G035400 Sobic010G035400 Sobic007G103400--Sobic010G035400 Sobic007G103400--Sobic001G504400 Sobic003G306200 Sobic003G306200 Sobic007G103400--Sobic003G306200 Sobic002G198300 Sobic002G198300 Sobic007G103400--Sobic002G198300 Sobic003G233700 Sobic003G233700 Sobic007G103400--Sobic003G233700 Sobic002G275300 Sobic002G275300 Sobic007G103400--Sobic002G275300 Sobic009G038701--Sobic002G206300 Sobic009G038701--Sobic010G125833 Sobic009G038701--Sobic001G504400 Sobic009G038701--Sobic001G180200 Sobic009G038701--Sobic001G258200 Sobic009G038701--Sobic003G185900 Sobic009G038701--Sobic008G129900 Sobic009G038701--Sobic008G033000 Sobic009G038701--Sobic009G207900 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic010G067100 Sobic010G067100 Sobic003G185900--Sobic010G067100 Sobic007G105500 Sobic007G105500 Sobic003G185900--Sobic007G105500 Sobic004G215800 Sobic004G215800 Sobic003G185900--Sobic004G215800 Sobic005G068700 Sobic005G068700 Sobic003G185900--Sobic005G068700 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic001G258200--Sobic003G185900 Sobic002G382700 Sobic002G382700 Sobic001G258200--Sobic002G382700 Sobic001G258200--Sobic008G129900 Sobic001G258200--Sobic001G504400 Sobic004G189800 Sobic004G189800 Sobic001G258200--Sobic004G189800 Sobic001G258200--Sobic008G033000 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic001G258200--Sobic005G068700 Sobic010G125833--Sobic009G038701 Sobic010G125833--Sobic001G504400 Sobic010G125833--Sobic002G206300 Sobic010G125833--Sobic008G033000 Sobic010G125833--Sobic002G198300 Sobic010G125833--Sobic003G185900 Sobic010G125833--Sobic008G129900 Sobic010G125833--Sobic002G298800 Sobic010G125833--Sobic001G180200 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic008G033000--Sobic001G217900 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic008G033000--Sobic009G038701 Sobic001G180200--Sobic003G341300 Sobic001G180200--Sobic002G206300 Sobic007G135800 Sobic007G135800 Sobic001G180200--Sobic007G135800 Sobic001G180200--Sobic009G038701 Sobic001G180200--Sobic009G207900 Sobic003G094100 Sobic003G094100 Sobic001G180200--Sobic003G094100 Sobic001G180200--Sobic001G504400 Sobic001G263100 Sobic001G263100 Sobic001G180200--Sobic001G263100 Sobic002G162400 Sobic002G162400 Sobic001G180200--Sobic002G162400 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G077300 Sobic001G077300 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G378100--Sobic001G258200
Octagon: transcription factors


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