Gene annotation
Transcriptome id Sobic.008G033000.1
Synonym Sb08g002836
Functional annotation CAAX amino terminal protease family protein, putative, expressed
UniProt A0A1Z5R4J5
Pfam PF02517
Panther DB PTHR10794 PTHR10794:SF52
NCBI CDD -
KEGG Orthology K07052; uncharacterized protein
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G26085 : CAAX amino terminal protease family protein
RAP-DB (Rice) LOC_Os05g22930.1 : CAAX amino terminal protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a053850
Brachypodium -
Barley HORVU7Hr1G084900.18 , HORVU7Hr1G084900.19 , HORVU7Hr1G084900.16 , HORVU7Hr1G084900.17 , HORVU7Hr1G084900.14 , HORVU7Hr1G084900.15 , HORVU7Hr1G084900.12 , HORVU7Hr1G084900.13 , HORVU7Hr1G084900.10 , HORVU7Hr1G084900.11 , HORVU7Hr1G084900.20 , HORVU7Hr1G084900.8 , HORVU7Hr1G084900.9 , HORVU7Hr1G084900.4 , HORVU7Hr1G084900.5 , HORVU7Hr1G084900.6 , HORVU7Hr1G084900.7 , HORVU7Hr1G084900.1 , HORVU7Hr1G084900.2 , HORVU7Hr1G084900.3
Wheat TraesCS7D02G351200 , TraesCS7B02G255900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
2 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.001G504400 expressed protein -
5 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
6 Sobic.010G125833 - -
7 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
8 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
9 Sobic.009G038701 - -
10 Sobic.002G220900 expressed protein -
11 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
12 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
13 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
14 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
15 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
16 Sobic.009G256100 expressed protein -
17 Sobic.003G097600 - -
18 Sobic.001G536700 expressed protein -
19 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
20 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1


Gene co-expression network
sample Sobic008G033000 Sobic008G033000 Sobic003G185900 Sobic003G185900 Sobic008G033000--Sobic003G185900 Sobic008G129900 Sobic008G129900 Sobic008G033000--Sobic008G129900 Sobic001G258200 Sobic001G258200 Sobic008G033000--Sobic001G258200 Sobic001G504400 Sobic001G504400 Sobic008G033000--Sobic001G504400 Sobic001G217900 Sobic001G217900 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic002G206300 Sobic002G206300 Sobic008G033000--Sobic002G206300 Sobic004G215800 Sobic004G215800 Sobic008G033000--Sobic004G215800 Sobic009G038701 Sobic009G038701 Sobic008G033000--Sobic009G038701 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic010G067100 Sobic010G067100 Sobic003G185900--Sobic010G067100 Sobic007G105500 Sobic007G105500 Sobic003G185900--Sobic007G105500 Sobic003G185900--Sobic004G215800 Sobic005G068700 Sobic005G068700 Sobic003G185900--Sobic005G068700 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic010G231300 Sobic010G231300 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic008G129900--Sobic002G206300 Sobic003G341300 Sobic003G341300 Sobic008G129900--Sobic003G341300 Sobic001G258200--Sobic003G185900 Sobic002G382700 Sobic002G382700 Sobic001G258200--Sobic002G382700 Sobic001G258200--Sobic008G129900 Sobic001G258200--Sobic001G504400 Sobic004G189800 Sobic004G189800 Sobic001G258200--Sobic004G189800 Sobic001G258200--Sobic008G033000 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic001G258200--Sobic005G068700 Sobic001G504400--Sobic002G206300 Sobic007G103400 Sobic007G103400 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic001G504400--Sobic010G125833 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G378100 Sobic001G378100 Sobic001G504400--Sobic001G378100 Sobic007G058100 Sobic007G058100 Sobic001G217900--Sobic007G058100 Sobic001G217900--Sobic010G231300 Sobic001G217900--Sobic008G129900 Sobic001G217900--Sobic001G378100 Sobic001G217900--Sobic001G258200 Sobic001G217900--Sobic002G206300 Sobic001G217900--Sobic001G263100 Sobic001G217900--Sobic008G033000 Sobic001G540600 Sobic001G540600 Sobic001G217900--Sobic001G540600 Sobic010G125833--Sobic009G038701 Sobic010G125833--Sobic001G504400 Sobic010G125833--Sobic002G206300 Sobic010G125833--Sobic008G033000 Sobic002G198300 Sobic002G198300 Sobic010G125833--Sobic002G198300 Sobic010G125833--Sobic003G185900 Sobic010G125833--Sobic008G129900 Sobic002G298800 Sobic002G298800 Sobic010G125833--Sobic002G298800 Sobic010G125833--Sobic001G180200 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic001G536700 Sobic001G536700 Sobic002G206300--Sobic001G536700 Sobic009G207900 Sobic009G207900 Sobic002G206300--Sobic009G207900 Sobic002G206300--Sobic001G258200 Sobic002G206300--Sobic008G129900 Sobic002G206300--Sobic001G217900 Sobic002G206300--Sobic003G341300 Sobic004G215800--Sobic007G105500 Sobic004G215800--Sobic003G036200 Sobic004G215800--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic004G215800--Sobic003G367500 Sobic002G404800 Sobic002G404800 Sobic004G215800--Sobic002G404800 Sobic004G215800--Sobic008G033000 Sobic009G256100 Sobic009G256100 Sobic004G215800--Sobic009G256100 Sobic004G215800--Sobic003G097600 Sobic004G112100 Sobic004G112100 Sobic004G215800--Sobic004G112100 Sobic009G038701--Sobic002G206300 Sobic009G038701--Sobic010G125833 Sobic009G038701--Sobic001G504400 Sobic009G038701--Sobic001G180200 Sobic009G038701--Sobic001G258200 Sobic009G038701--Sobic003G185900 Sobic009G038701--Sobic008G129900 Sobic009G038701--Sobic008G033000 Sobic009G038701--Sobic009G207900
Octagon: transcription factors


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