Gene annotation
Transcriptome id Sobic.003G097600.1
Synonym
Functional annotation -
UniProt A0A1B6Q2D0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.007G006400 - -
3 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
4 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
5 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
6 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
7 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.009G038701 - -
9 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.009G256100 expressed protein -
12 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
13 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
14 Sobic.010G125833 - -
15 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
16 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
17 Sobic.001G504400 expressed protein -
18 Sobic.006G153400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, AFG1 family domain containing protein, expressed -
19 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
20 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -


Gene co-expression network
sample Sobic003G097600 Sobic003G097600 Sobic008G129900 Sobic008G129900 Sobic003G097600--Sobic008G129900 Sobic007G006400 Sobic007G006400 Sobic003G097600--Sobic007G006400 Sobic004G215800 Sobic004G215800 Sobic003G097600--Sobic004G215800 Sobic003G185900 Sobic003G185900 Sobic003G097600--Sobic003G185900 Sobic008G033000 Sobic008G033000 Sobic003G097600--Sobic008G033000 Sobic004G112100 Sobic004G112100 Sobic003G097600--Sobic004G112100 Sobic004G082300 Sobic004G082300 Sobic003G097600--Sobic004G082300 Sobic009G038701 Sobic009G038701 Sobic003G097600--Sobic009G038701 Sobic001G258200 Sobic001G258200 Sobic003G097600--Sobic001G258200 Sobic010G231300 Sobic010G231300 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic001G217900 Sobic001G217900 Sobic008G129900--Sobic001G217900 Sobic006G235400 Sobic006G235400 Sobic008G129900--Sobic006G235400 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic002G206300 Sobic002G206300 Sobic008G129900--Sobic002G206300 Sobic003G341300 Sobic003G341300 Sobic008G129900--Sobic003G341300 Sobic007G006400--Sobic003G097600 Sobic010G104800 Sobic010G104800 Sobic007G006400--Sobic010G104800 Sobic006G153400 Sobic006G153400 Sobic007G006400--Sobic006G153400 Sobic007G006400--Sobic008G129900 Sobic007G006400--Sobic004G112100 Sobic007G006400--Sobic004G082300 Sobic009G256100 Sobic009G256100 Sobic007G006400--Sobic009G256100 Sobic004G059800 Sobic004G059800 Sobic007G006400--Sobic004G059800 Sobic003G127800 Sobic003G127800 Sobic007G006400--Sobic003G127800 Sobic007G105500 Sobic007G105500 Sobic004G215800--Sobic007G105500 Sobic003G036200 Sobic003G036200 Sobic004G215800--Sobic003G036200 Sobic004G215800--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic004G215800--Sobic003G367500 Sobic002G404800 Sobic002G404800 Sobic004G215800--Sobic002G404800 Sobic004G215800--Sobic008G033000 Sobic004G215800--Sobic009G256100 Sobic004G215800--Sobic003G097600 Sobic004G215800--Sobic004G112100 Sobic003G185900--Sobic008G033000 Sobic001G504400 Sobic001G504400 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic010G067100 Sobic010G067100 Sobic003G185900--Sobic010G067100 Sobic003G185900--Sobic007G105500 Sobic003G185900--Sobic004G215800 Sobic005G068700 Sobic005G068700 Sobic003G185900--Sobic005G068700 Sobic003G185900--Sobic009G038701 Sobic003G185900--Sobic003G036200 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic008G033000--Sobic009G038701 Sobic004G112100--Sobic006G153400 Sobic009G048900 Sobic009G048900 Sobic004G112100--Sobic009G048900 Sobic004G112100--Sobic010G104800 Sobic004G112100--Sobic004G215800 Sobic004G112100--Sobic009G256100 Sobic004G112100--Sobic003G097600 Sobic004G112100--Sobic002G404800 Sobic004G112100--Sobic007G006400 Sobic004G027600 Sobic004G027600 Sobic004G112100--Sobic004G027600 Sobic007G058100 Sobic007G058100 Sobic004G082300--Sobic007G058100 Sobic004G082300--Sobic009G256100 Sobic004G082300--Sobic008G129900 Sobic004G082300--Sobic009G038701 Sobic004G082300--Sobic001G258200 Sobic002G382700 Sobic002G382700 Sobic004G082300--Sobic002G382700 Sobic004G082300--Sobic003G097600 Sobic004G082300--Sobic001G263100 Sobic004G082300--Sobic006G153400 Sobic009G038701--Sobic002G206300 Sobic009G038701--Sobic010G125833 Sobic009G038701--Sobic001G504400 Sobic001G180200 Sobic001G180200 Sobic009G038701--Sobic001G180200 Sobic009G038701--Sobic001G258200 Sobic009G038701--Sobic003G185900 Sobic009G038701--Sobic008G129900 Sobic009G038701--Sobic008G033000 Sobic009G207900 Sobic009G207900 Sobic009G038701--Sobic009G207900 Sobic001G258200--Sobic003G185900 Sobic001G258200--Sobic002G382700 Sobic001G258200--Sobic008G129900 Sobic001G258200--Sobic001G504400 Sobic004G189800 Sobic004G189800 Sobic001G258200--Sobic004G189800 Sobic001G258200--Sobic008G033000 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic001G258200--Sobic005G068700
Octagon: transcription factors


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