Gene annotation
Transcriptome id Sobic.006G265900.1
Synonym ATX, Sb06g032830, ATHX, THX
Functional annotation thioredoxin, putative, expressed
UniProt C5YAH6
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF270
NCBI CDD KOG0910; Thioredoxin-like protein
KEGG Orthology K03671; thioredoxin 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT1G50320 : thioredoxin X
RAP-DB (Rice) LOC_Os04g57930.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a009310 , Zm00025a057374
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G265900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
2 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
3 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
4 Sobic.003G148200 RNA recognition motif containing protein, putative, expressed -
5 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
6 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
7 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
8 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
9 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
10 Sobic.001G005200 expressed protein -
11 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
12 Sobic.001G500700 expressed protein -
13 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
14 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
15 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
16 Sobic.010G245200 expressed protein -
17 Sobic.005G005400 MATE efflux family protein(PubMedID : 26465154)@MATE efflux protein, putative, expressed -
18 Sobic.006G155500 expressed protein -
19 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
20 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G265900 Sobic006G265900 Sobic001G128600 Sobic001G128600 Sobic006G265900--Sobic001G128600 Sobic006G097500 Sobic006G097500 Sobic006G265900--Sobic006G097500 Sobic002G061900 Sobic002G061900 Sobic006G265900--Sobic002G061900 Sobic003G148200 Sobic003G148200 Sobic006G265900--Sobic003G148200 Sobic002G298800 Sobic002G298800 Sobic006G265900--Sobic002G298800 Sobic002G112400 Sobic002G112400 Sobic006G265900--Sobic002G112400 Sobic007G169100 Sobic007G169100 Sobic006G265900--Sobic007G169100 Sobic007G053800 Sobic007G053800 Sobic006G265900--Sobic007G053800 Sobic004G359600 Sobic004G359600 Sobic006G265900--Sobic004G359600 Sobic001G128600--Sobic002G112400 Sobic001G128600--Sobic006G265900 Sobic008G006100 Sobic008G006100 Sobic001G128600--Sobic008G006100 Sobic001G122300 Sobic001G122300 Sobic001G128600--Sobic001G122300 Sobic001G005200 Sobic001G005200 Sobic001G128600--Sobic001G005200 Sobic005G100300 Sobic005G100300 Sobic001G128600--Sobic005G100300 Sobic001G128600--Sobic002G298800 Sobic009G175500 Sobic009G175500 Sobic001G128600--Sobic009G175500 Sobic001G128600--Sobic006G097500 Sobic006G097500--Sobic002G061900 Sobic006G097500--Sobic002G298800 Sobic004G103300 Sobic004G103300 Sobic006G097500--Sobic004G103300 Sobic006G097500--Sobic006G265900 Sobic001G368600 Sobic001G368600 Sobic006G097500--Sobic001G368600 Sobic010G231500 Sobic010G231500 Sobic006G097500--Sobic010G231500 Sobic006G097500--Sobic007G169100 Sobic005G005400 Sobic005G005400 Sobic006G097500--Sobic005G005400 Sobic005G028800 Sobic005G028800 Sobic006G097500--Sobic005G028800 Sobic002G061900--Sobic006G097500 Sobic002G061900--Sobic006G265900 Sobic002G061900--Sobic007G169100 Sobic004G124400 Sobic004G124400 Sobic002G061900--Sobic004G124400 Sobic002G061900--Sobic010G231500 Sobic002G061900--Sobic001G128600 Sobic001G118400 Sobic001G118400 Sobic002G061900--Sobic001G118400 Sobic002G061900--Sobic001G368600 Sobic006G155500 Sobic006G155500 Sobic002G061900--Sobic006G155500 Sobic003G148200--Sobic006G265900 Sobic003G148200--Sobic001G128600 Sobic003G148200--Sobic007G053800 Sobic002G275300 Sobic002G275300 Sobic003G148200--Sobic002G275300 Sobic003G148200--Sobic001G122300 Sobic003G148200--Sobic006G097500 Sobic010G245200 Sobic010G245200 Sobic003G148200--Sobic010G245200 Sobic003G431700 Sobic003G431700 Sobic003G148200--Sobic003G431700 Sobic003G148200--Sobic002G298800 Sobic001G393300 Sobic001G393300 Sobic002G298800--Sobic001G393300 Sobic002G198300 Sobic002G198300 Sobic002G298800--Sobic002G198300 Sobic002G298800--Sobic004G103300 Sobic007G103400 Sobic007G103400 Sobic002G298800--Sobic007G103400 Sobic002G298800--Sobic006G097500 Sobic002G298800--Sobic001G368600 Sobic003G094100 Sobic003G094100 Sobic002G298800--Sobic003G094100 Sobic004G353100 Sobic004G353100 Sobic002G298800--Sobic004G353100 Sobic002G298800--Sobic002G275300 Sobic002G112400--Sobic001G128600 Sobic002G112400--Sobic008G006100 Sobic003G160800 Sobic003G160800 Sobic002G112400--Sobic003G160800 Sobic009G062400 Sobic009G062400 Sobic002G112400--Sobic009G062400 Sobic002G112400--Sobic006G265900 Sobic002G112400--Sobic001G122300 Sobic009G056700 Sobic009G056700 Sobic002G112400--Sobic009G056700 Sobic009G237000 Sobic009G237000 Sobic002G112400--Sobic009G237000 Sobic003G387100 Sobic003G387100 Sobic002G112400--Sobic003G387100 Sobic003G328100 Sobic003G328100 Sobic007G169100--Sobic003G328100 Sobic007G169100--Sobic002G061900 Sobic007G169100--Sobic006G097500 Sobic007G169100--Sobic006G265900 Sobic007G169100--Sobic010G231500 Sobic006G140700 Sobic006G140700 Sobic007G169100--Sobic006G140700 Sobic006G063900 Sobic006G063900 Sobic007G169100--Sobic006G063900 Sobic007G169100--Sobic005G028800 Sobic007G169100--Sobic006G155500 Sobic007G053800--Sobic010G245200 Sobic007G053800--Sobic006G265900 Sobic007G053800--Sobic003G431700 Sobic007G053800--Sobic001G128600 Sobic007G053800--Sobic001G122300 Sobic001G500700 Sobic001G500700 Sobic007G053800--Sobic001G500700 Sobic002G370600 Sobic002G370600 Sobic007G053800--Sobic002G370600 Sobic007G053800--Sobic003G148200 Sobic006G188000 Sobic006G188000 Sobic007G053800--Sobic006G188000 Sobic007G173800 Sobic007G173800 Sobic004G359600--Sobic007G173800 Sobic001G167900 Sobic001G167900 Sobic004G359600--Sobic001G167900 Sobic008G102000 Sobic008G102000 Sobic004G359600--Sobic008G102000 Sobic007G181400 Sobic007G181400 Sobic004G359600--Sobic007G181400 Sobic003G378600 Sobic003G378600 Sobic004G359600--Sobic003G378600 Sobic004G359600--Sobic006G265900 Sobic004G359600--Sobic001G005200 Sobic008G172700 Sobic008G172700 Sobic004G359600--Sobic008G172700 Sobic009G140600 Sobic009G140600 Sobic004G359600--Sobic009G140600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.