Gene annotation
Transcriptome id Sobic.003G148200.1
Synonym
Functional annotation RNA recognition motif containing protein, putative, expressed
UniProt A0A1B6Q3A0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65260 : RNA-binding (RRM/RBD/RNP motifs) family protein
RAP-DB (Rice) LOC_Os02g52140.1 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
2 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
3 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
4 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
5 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
6 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
7 Sobic.010G245200 expressed protein -
8 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
9 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
10 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
11 Sobic.007G225500 expressed protein -
12 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
13 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
15 Sobic.002G370600 - -
16 Sobic.007G181400 TraB family protein, putative, expressed -
17 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
18 Sobic.008G006100 MATE efflux protein, putative, expressed -
19 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
20 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -


Gene co-expression network
sample Sobic003G148200 Sobic003G148200 Sobic006G265900 Sobic006G265900 Sobic003G148200--Sobic006G265900 Sobic001G128600 Sobic001G128600 Sobic003G148200--Sobic001G128600 Sobic007G053800 Sobic007G053800 Sobic003G148200--Sobic007G053800 Sobic002G275300 Sobic002G275300 Sobic003G148200--Sobic002G275300 Sobic001G122300 Sobic001G122300 Sobic003G148200--Sobic001G122300 Sobic006G097500 Sobic006G097500 Sobic003G148200--Sobic006G097500 Sobic010G245200 Sobic010G245200 Sobic003G148200--Sobic010G245200 Sobic003G431700 Sobic003G431700 Sobic003G148200--Sobic003G431700 Sobic002G298800 Sobic002G298800 Sobic003G148200--Sobic002G298800 Sobic006G265900--Sobic001G128600 Sobic006G265900--Sobic006G097500 Sobic002G061900 Sobic002G061900 Sobic006G265900--Sobic002G061900 Sobic006G265900--Sobic003G148200 Sobic006G265900--Sobic002G298800 Sobic002G112400 Sobic002G112400 Sobic006G265900--Sobic002G112400 Sobic007G169100 Sobic007G169100 Sobic006G265900--Sobic007G169100 Sobic006G265900--Sobic007G053800 Sobic004G359600 Sobic004G359600 Sobic006G265900--Sobic004G359600 Sobic001G128600--Sobic002G112400 Sobic001G128600--Sobic006G265900 Sobic008G006100 Sobic008G006100 Sobic001G128600--Sobic008G006100 Sobic001G128600--Sobic001G122300 Sobic001G005200 Sobic001G005200 Sobic001G128600--Sobic001G005200 Sobic005G100300 Sobic005G100300 Sobic001G128600--Sobic005G100300 Sobic001G128600--Sobic002G298800 Sobic009G175500 Sobic009G175500 Sobic001G128600--Sobic009G175500 Sobic001G128600--Sobic006G097500 Sobic007G053800--Sobic010G245200 Sobic007G053800--Sobic006G265900 Sobic007G053800--Sobic003G431700 Sobic007G053800--Sobic001G128600 Sobic007G053800--Sobic001G122300 Sobic001G500700 Sobic001G500700 Sobic007G053800--Sobic001G500700 Sobic002G370600 Sobic002G370600 Sobic007G053800--Sobic002G370600 Sobic007G053800--Sobic003G148200 Sobic006G188000 Sobic006G188000 Sobic007G053800--Sobic006G188000 Sobic006G238200 Sobic006G238200 Sobic002G275300--Sobic006G238200 Sobic010G181300 Sobic010G181300 Sobic002G275300--Sobic010G181300 Sobic001G491000 Sobic001G491000 Sobic002G275300--Sobic001G491000 Sobic002G275300--Sobic002G298800 Sobic007G108900 Sobic007G108900 Sobic002G275300--Sobic007G108900 Sobic007G225500 Sobic007G225500 Sobic002G275300--Sobic007G225500 Sobic007G103400 Sobic007G103400 Sobic002G275300--Sobic007G103400 Sobic010G035400 Sobic010G035400 Sobic002G275300--Sobic010G035400 Sobic003G306200 Sobic003G306200 Sobic002G275300--Sobic003G306200 Sobic001G122300--Sobic001G128600 Sobic009G140600 Sobic009G140600 Sobic001G122300--Sobic009G140600 Sobic003G378600 Sobic003G378600 Sobic001G122300--Sobic003G378600 Sobic001G122300--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic001G122300--Sobic004G012900 Sobic001G122300--Sobic002G112400 Sobic001G122300--Sobic010G245200 Sobic003G002300 Sobic003G002300 Sobic001G122300--Sobic003G002300 Sobic001G122300--Sobic006G265900 Sobic006G097500--Sobic002G061900 Sobic006G097500--Sobic002G298800 Sobic004G103300 Sobic004G103300 Sobic006G097500--Sobic004G103300 Sobic006G097500--Sobic006G265900 Sobic001G368600 Sobic001G368600 Sobic006G097500--Sobic001G368600 Sobic010G231500 Sobic010G231500 Sobic006G097500--Sobic010G231500 Sobic006G097500--Sobic007G169100 Sobic005G005400 Sobic005G005400 Sobic006G097500--Sobic005G005400 Sobic005G028800 Sobic005G028800 Sobic006G097500--Sobic005G028800 Sobic010G245200--Sobic007G053800 Sobic010G245200--Sobic002G370600 Sobic010G245200--Sobic001G005200 Sobic010G245200--Sobic003G431700 Sobic010G245200--Sobic009G140600 Sobic010G245200--Sobic001G122300 Sobic010G245200--Sobic006G188000 Sobic010G245200--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic010G245200--Sobic008G102000 Sobic001G519800 Sobic001G519800 Sobic003G431700--Sobic001G519800 Sobic003G398800 Sobic003G398800 Sobic003G431700--Sobic003G398800 Sobic006G207800 Sobic006G207800 Sobic003G431700--Sobic006G207800 Sobic003G431700--Sobic002G370600 Sobic003G431700--Sobic006G238200 Sobic004G308700 Sobic004G308700 Sobic003G431700--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431700--Sobic004G272100 Sobic003G431700--Sobic010G181300 Sobic001G102800 Sobic001G102800 Sobic003G431700--Sobic001G102800 Sobic001G393300 Sobic001G393300 Sobic002G298800--Sobic001G393300 Sobic002G198300 Sobic002G198300 Sobic002G298800--Sobic002G198300 Sobic002G298800--Sobic004G103300 Sobic002G298800--Sobic007G103400 Sobic002G298800--Sobic006G097500 Sobic002G298800--Sobic001G368600 Sobic003G094100 Sobic003G094100 Sobic002G298800--Sobic003G094100 Sobic004G353100 Sobic004G353100 Sobic002G298800--Sobic004G353100 Sobic002G298800--Sobic002G275300
Octagon: transcription factors


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