Gene annotation
Transcriptome id Sobic.002G061900.1
Synonym Sb02g005160
Functional annotation peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
UniProt C5XBU3
Pfam PF00254
Panther DB PTHR10516 PTHR10516:SF323
NCBI CDD KOG0544; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0006457; protein folding


Orthologs (automatic annotation)
TAIR AT3G10060 : FKBP-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os07g09040.1 : peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
MaizeGDB (Corn) Zm00025a045265
Brachypodium KQK20510
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G061900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
2 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
3 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
4 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
5 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
6 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
7 Sobic.001G118400 expressed protein -
8 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.006G155500 expressed protein -
10 Sobic.009G004100 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
11 Sobic.006G025500 - -
12 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
13 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
14 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
15 Sobic.006G140700 "aldo/keto reductase (AKR) family protein, up-regulated under drought stress , maped into a unique stay green QTL(QSTG3_6)"(PubMedID : 24655390)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
17 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
18 Sobic.006G063900 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.003G328100 expressed protein -
20 Sobic.006G025400 - -


Gene co-expression network
sample Sobic002G061900 Sobic002G061900 Sobic006G097500 Sobic006G097500 Sobic002G061900--Sobic006G097500 Sobic006G265900 Sobic006G265900 Sobic002G061900--Sobic006G265900 Sobic007G169100 Sobic007G169100 Sobic002G061900--Sobic007G169100 Sobic004G124400 Sobic004G124400 Sobic002G061900--Sobic004G124400 Sobic010G231500 Sobic010G231500 Sobic002G061900--Sobic010G231500 Sobic001G128600 Sobic001G128600 Sobic002G061900--Sobic001G128600 Sobic001G118400 Sobic001G118400 Sobic002G061900--Sobic001G118400 Sobic001G368600 Sobic001G368600 Sobic002G061900--Sobic001G368600 Sobic006G155500 Sobic006G155500 Sobic002G061900--Sobic006G155500 Sobic006G097500--Sobic002G061900 Sobic002G298800 Sobic002G298800 Sobic006G097500--Sobic002G298800 Sobic004G103300 Sobic004G103300 Sobic006G097500--Sobic004G103300 Sobic006G097500--Sobic006G265900 Sobic006G097500--Sobic001G368600 Sobic006G097500--Sobic010G231500 Sobic006G097500--Sobic007G169100 Sobic005G005400 Sobic005G005400 Sobic006G097500--Sobic005G005400 Sobic005G028800 Sobic005G028800 Sobic006G097500--Sobic005G028800 Sobic006G265900--Sobic001G128600 Sobic006G265900--Sobic006G097500 Sobic006G265900--Sobic002G061900 Sobic003G148200 Sobic003G148200 Sobic006G265900--Sobic003G148200 Sobic006G265900--Sobic002G298800 Sobic002G112400 Sobic002G112400 Sobic006G265900--Sobic002G112400 Sobic006G265900--Sobic007G169100 Sobic007G053800 Sobic007G053800 Sobic006G265900--Sobic007G053800 Sobic004G359600 Sobic004G359600 Sobic006G265900--Sobic004G359600 Sobic003G328100 Sobic003G328100 Sobic007G169100--Sobic003G328100 Sobic007G169100--Sobic002G061900 Sobic007G169100--Sobic006G097500 Sobic007G169100--Sobic006G265900 Sobic007G169100--Sobic010G231500 Sobic006G140700 Sobic006G140700 Sobic007G169100--Sobic006G140700 Sobic006G063900 Sobic006G063900 Sobic007G169100--Sobic006G063900 Sobic007G169100--Sobic005G028800 Sobic007G169100--Sobic006G155500 Sobic004G124400--Sobic005G028800 Sobic004G124400--Sobic006G063900 Sobic007G166300 Sobic007G166300 Sobic004G124400--Sobic007G166300 Sobic001G167900 Sobic001G167900 Sobic004G124400--Sobic001G167900 Sobic004G124400--Sobic010G231500 Sobic004G124400--Sobic002G061900 Sobic004G124400--Sobic006G097500 Sobic001G436400 Sobic001G436400 Sobic004G124400--Sobic001G436400 Sobic004G124400--Sobic004G359600 Sobic009G004100 Sobic009G004100 Sobic010G231500--Sobic009G004100 Sobic010G231500--Sobic006G097500 Sobic004G300100 Sobic004G300100 Sobic010G231500--Sobic004G300100 Sobic010G231500--Sobic004G103300 Sobic007G124500 Sobic007G124500 Sobic010G231500--Sobic007G124500 Sobic010G231500--Sobic005G028800 Sobic010G231500--Sobic004G124400 Sobic010G231500--Sobic001G368600 Sobic002G356900 Sobic002G356900 Sobic010G231500--Sobic002G356900 Sobic001G128600--Sobic002G112400 Sobic001G128600--Sobic006G265900 Sobic008G006100 Sobic008G006100 Sobic001G128600--Sobic008G006100 Sobic001G122300 Sobic001G122300 Sobic001G128600--Sobic001G122300 Sobic001G005200 Sobic001G005200 Sobic001G128600--Sobic001G005200 Sobic005G100300 Sobic005G100300 Sobic001G128600--Sobic005G100300 Sobic001G128600--Sobic002G298800 Sobic009G175500 Sobic009G175500 Sobic001G128600--Sobic009G175500 Sobic001G128600--Sobic006G097500 Sobic001G118400--Sobic006G155500 Sobic003G070900 Sobic003G070900 Sobic001G118400--Sobic003G070900 Sobic001G118400--Sobic003G328100 Sobic004G165900 Sobic004G165900 Sobic001G118400--Sobic004G165900 Sobic001G286600 Sobic001G286600 Sobic001G118400--Sobic001G286600 Sobic001G118400--Sobic002G061900 Sobic010G056300 Sobic010G056300 Sobic001G118400--Sobic010G056300 Sobic004G252500 Sobic004G252500 Sobic001G118400--Sobic004G252500 Sobic001G118400--Sobic006G140700 Sobic001G368600--Sobic004G103300 Sobic001G368600--Sobic006G097500 Sobic001G368600--Sobic002G298800 Sobic001G393300 Sobic001G393300 Sobic001G368600--Sobic001G393300 Sobic007G135800 Sobic007G135800 Sobic001G368600--Sobic007G135800 Sobic002G072500 Sobic002G072500 Sobic001G368600--Sobic002G072500 Sobic002G198300 Sobic002G198300 Sobic001G368600--Sobic002G198300 Sobic001G368600--Sobic007G166300 Sobic006G025500 Sobic006G025500 Sobic001G368600--Sobic006G025500 Sobic006G155500--Sobic001G118400 Sobic006G050400 Sobic006G050400 Sobic006G155500--Sobic006G050400 Sobic006G155500--Sobic003G328100 Sobic003G253300 Sobic003G253300 Sobic006G155500--Sobic003G253300 Sobic006G155500--Sobic001G286600 Sobic006G110900 Sobic006G110900 Sobic006G155500--Sobic006G110900 Sobic006G155500--Sobic002G061900 Sobic006G155500--Sobic003G070900 Sobic006G155500--Sobic006G097500
Octagon: transcription factors


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