Gene annotation
Transcriptome id Sobic.003G328100.1
Synonym Sb03g037410
Functional annotation expressed protein
UniProt C5XMI5
Pfam PF11460
Panther DB PTHR35734 PTHR35734:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G17930 : -
RAP-DB (Rice) LOC_Os01g59080.1 : expressed protein
MaizeGDB (Corn) Zm00025a027169
Brachypodium KQK10211
Barley HORVU3Hr1G078830.3 , HORVU3Hr1G078830.2 , HORVU3Hr1G078830.6 , HORVU3Hr1G078830.5 , HORVU3Hr1G078830.4
Wheat TraesCS3D02G325900 , TraesCS3A02G332400 , TraesCS3B02G362500 , TraesCS3B02G362500
Populus -


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cDNA sequences
Sobic.003G328100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
2 Sobic.001G118400 expressed protein -
3 Sobic.006G155500 expressed protein -
4 Sobic.006G140700 "aldo/keto reductase (AKR) family protein, up-regulated under drought stress , maped into a unique stay green QTL(QSTG3_6)"(PubMedID : 24655390)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.007G107700 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
6 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
7 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
8 Sobic.004G281900 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed K01770: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
9 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
10 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
11 Sobic.003G097500 - -
12 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
13 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
14 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
15 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
16 Sobic.006G158700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
17 Sobic.004G006400 cytochrome P450, putative, expressed -
18 Sobic.002G136100 genetic modifier, putative, expressed -
19 Sobic.006G226601 - -
20 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I


Gene co-expression network
sample Sobic003G328100 Sobic003G328100 Sobic007G169100 Sobic007G169100 Sobic003G328100--Sobic007G169100 Sobic001G118400 Sobic001G118400 Sobic003G328100--Sobic001G118400 Sobic006G155500 Sobic006G155500 Sobic003G328100--Sobic006G155500 Sobic006G140700 Sobic006G140700 Sobic003G328100--Sobic006G140700 Sobic007G107700 Sobic007G107700 Sobic003G328100--Sobic007G107700 Sobic001G286600 Sobic001G286600 Sobic003G328100--Sobic001G286600 Sobic010G231500 Sobic010G231500 Sobic003G328100--Sobic010G231500 Sobic004G281900 Sobic004G281900 Sobic003G328100--Sobic004G281900 Sobic006G097500 Sobic006G097500 Sobic003G328100--Sobic006G097500 Sobic007G169100--Sobic003G328100 Sobic002G061900 Sobic002G061900 Sobic007G169100--Sobic002G061900 Sobic007G169100--Sobic006G097500 Sobic006G265900 Sobic006G265900 Sobic007G169100--Sobic006G265900 Sobic007G169100--Sobic010G231500 Sobic007G169100--Sobic006G140700 Sobic006G063900 Sobic006G063900 Sobic007G169100--Sobic006G063900 Sobic005G028800 Sobic005G028800 Sobic007G169100--Sobic005G028800 Sobic007G169100--Sobic006G155500 Sobic001G118400--Sobic006G155500 Sobic003G070900 Sobic003G070900 Sobic001G118400--Sobic003G070900 Sobic001G118400--Sobic003G328100 Sobic004G165900 Sobic004G165900 Sobic001G118400--Sobic004G165900 Sobic001G118400--Sobic001G286600 Sobic001G118400--Sobic002G061900 Sobic010G056300 Sobic010G056300 Sobic001G118400--Sobic010G056300 Sobic004G252500 Sobic004G252500 Sobic001G118400--Sobic004G252500 Sobic001G118400--Sobic006G140700 Sobic006G155500--Sobic001G118400 Sobic006G050400 Sobic006G050400 Sobic006G155500--Sobic006G050400 Sobic006G155500--Sobic003G328100 Sobic003G253300 Sobic003G253300 Sobic006G155500--Sobic003G253300 Sobic006G155500--Sobic001G286600 Sobic006G110900 Sobic006G110900 Sobic006G155500--Sobic006G110900 Sobic006G155500--Sobic002G061900 Sobic006G155500--Sobic003G070900 Sobic006G155500--Sobic006G097500 Sobic006G025400 Sobic006G025400 Sobic006G140700--Sobic006G025400 Sobic006G140700--Sobic003G328100 Sobic006G140700--Sobic007G169100 Sobic006G140700--Sobic002G061900 Sobic006G140700--Sobic001G118400 Sobic006G140700--Sobic004G165900 Sobic006G140700--Sobic006G097500 Sobic006G140700--Sobic006G155500 Sobic006G140700--Sobic010G231500 Sobic007G107700--Sobic003G328100 Sobic007G107700--Sobic003G070900 Sobic003G203000 Sobic003G203000 Sobic007G107700--Sobic003G203000 Sobic009G170200 Sobic009G170200 Sobic007G107700--Sobic009G170200 Sobic007G107700--Sobic005G028800 Sobic007G107700--Sobic001G118400 Sobic007G135800 Sobic007G135800 Sobic007G107700--Sobic007G135800 Sobic007G107700--Sobic010G231500 Sobic001G368600 Sobic001G368600 Sobic007G107700--Sobic001G368600 Sobic004G154400 Sobic004G154400 Sobic001G286600--Sobic004G154400 Sobic009G062400 Sobic009G062400 Sobic001G286600--Sobic009G062400 Sobic010G269400 Sobic010G269400 Sobic001G286600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic001G286600--Sobic010G058200 Sobic001G286600--Sobic001G118400 Sobic001G286600--Sobic003G328100 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic001G286600--Sobic003G070900 Sobic009G004100 Sobic009G004100 Sobic010G231500--Sobic009G004100 Sobic010G231500--Sobic006G097500 Sobic004G300100 Sobic004G300100 Sobic010G231500--Sobic004G300100 Sobic004G103300 Sobic004G103300 Sobic010G231500--Sobic004G103300 Sobic007G124500 Sobic007G124500 Sobic010G231500--Sobic007G124500 Sobic010G231500--Sobic005G028800 Sobic004G124400 Sobic004G124400 Sobic010G231500--Sobic004G124400 Sobic010G231500--Sobic001G368600 Sobic002G356900 Sobic002G356900 Sobic010G231500--Sobic002G356900 Sobic007G087100 Sobic007G087100 Sobic004G281900--Sobic007G087100 Sobic004G281900--Sobic003G328100 Sobic004G281900--Sobic003G070900 Sobic006G102000 Sobic006G102000 Sobic004G281900--Sobic006G102000 Sobic006G197300 Sobic006G197300 Sobic004G281900--Sobic006G197300 Sobic001G005200 Sobic001G005200 Sobic004G281900--Sobic001G005200 Sobic006G232600 Sobic006G232600 Sobic004G281900--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic004G281900--Sobic001G436400 Sobic002G072400 Sobic002G072400 Sobic004G281900--Sobic002G072400 Sobic006G097500--Sobic002G061900 Sobic002G298800 Sobic002G298800 Sobic006G097500--Sobic002G298800 Sobic006G097500--Sobic004G103300 Sobic006G097500--Sobic006G265900 Sobic006G097500--Sobic001G368600 Sobic006G097500--Sobic010G231500 Sobic006G097500--Sobic007G169100 Sobic005G005400 Sobic005G005400 Sobic006G097500--Sobic005G005400 Sobic006G097500--Sobic005G028800
Octagon: transcription factors


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