Gene annotation
Transcriptome id Sobic.001G286600.1
Synonym Sb01g028150
Functional annotation PAP fibrillin family domain containing protein, expressed
UniProt C5WQR6
Pfam PF04755
Panther DB PTHR31906 PTHR31906:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35490 : Plastid-lipid associated protein PAP / fibrillin family protein
RAP-DB (Rice) LOC_Os10g42500.1 : PAP fibrillin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003499
Brachypodium -
Barley -
Wheat TraesCS1D02G197400 , TraesCS1B02G208500 , TraesCS1A02G193500
Populus -


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cDNA sequences
Sobic.001G286600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G154400 drought-induced protein 1, putative, expressed -
2 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
3 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
4 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
5 Sobic.001G118400 expressed protein -
6 Sobic.003G328100 expressed protein -
7 Sobic.006G155500 expressed protein -
8 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
10 Sobic.008G006100 MATE efflux protein, putative, expressed -
11 Sobic.010G140600 bolA, putative, expressed -
12 Sobic.004G281900 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed K01770: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
13 Sobic.004G006400 cytochrome P450, putative, expressed -
14 Sobic.006G050400 expressed protein -
15 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
16 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
17 Sobic.002G136100 genetic modifier, putative, expressed -
18 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
19 Sobic.007G015500 no apical meristem protein, putative, expressed -
20 Sobic.003G037300 Twin LOV 1, putative, expressed -


Gene co-expression network
sample Sobic001G286600 Sobic001G286600 Sobic004G154400 Sobic004G154400 Sobic001G286600--Sobic004G154400 Sobic009G062400 Sobic009G062400 Sobic001G286600--Sobic009G062400 Sobic010G269400 Sobic010G269400 Sobic001G286600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic001G286600--Sobic010G058200 Sobic001G118400 Sobic001G118400 Sobic001G286600--Sobic001G118400 Sobic003G328100 Sobic003G328100 Sobic001G286600--Sobic003G328100 Sobic006G155500 Sobic006G155500 Sobic001G286600--Sobic006G155500 Sobic006G110900 Sobic006G110900 Sobic001G286600--Sobic006G110900 Sobic003G070900 Sobic003G070900 Sobic001G286600--Sobic003G070900 Sobic009G219100 Sobic009G219100 Sobic004G154400--Sobic009G219100 Sobic004G154400--Sobic001G286600 Sobic004G154400--Sobic009G062400 Sobic004G154400--Sobic010G058200 Sobic002G136100 Sobic002G136100 Sobic004G154400--Sobic002G136100 Sobic009G207900 Sobic009G207900 Sobic004G154400--Sobic009G207900 Sobic004G006400 Sobic004G006400 Sobic004G154400--Sobic004G006400 Sobic009G237000 Sobic009G237000 Sobic004G154400--Sobic009G237000 Sobic006G158700 Sobic006G158700 Sobic004G154400--Sobic006G158700 Sobic008G006100 Sobic008G006100 Sobic009G062400--Sobic008G006100 Sobic002G112400 Sobic002G112400 Sobic009G062400--Sobic002G112400 Sobic009G062400--Sobic009G207900 Sobic009G062400--Sobic009G219100 Sobic003G037300 Sobic003G037300 Sobic009G062400--Sobic003G037300 Sobic009G062400--Sobic004G154400 Sobic009G062400--Sobic001G286600 Sobic003G345500 Sobic003G345500 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800 Sobic010G269400--Sobic001G286600 Sobic006G258700 Sobic006G258700 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G269400--Sobic010G058200 Sobic010G269400--Sobic003G037300 Sobic003G014300 Sobic003G014300 Sobic010G269400--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic010G269400--Sobic002G102200 Sobic010G269400--Sobic006G110900 Sobic010G269400--Sobic009G062400 Sobic010G058200--Sobic001G286600 Sobic006G188000 Sobic006G188000 Sobic010G058200--Sobic006G188000 Sobic010G058200--Sobic004G154400 Sobic010G058200--Sobic002G102200 Sobic010G058200--Sobic009G062400 Sobic010G058200--Sobic010G269400 Sobic010G058200--Sobic010G140600 Sobic006G102000 Sobic006G102000 Sobic010G058200--Sobic006G102000 Sobic010G058200--Sobic002G136100 Sobic001G118400--Sobic006G155500 Sobic001G118400--Sobic003G070900 Sobic001G118400--Sobic003G328100 Sobic004G165900 Sobic004G165900 Sobic001G118400--Sobic004G165900 Sobic001G118400--Sobic001G286600 Sobic002G061900 Sobic002G061900 Sobic001G118400--Sobic002G061900 Sobic010G056300 Sobic010G056300 Sobic001G118400--Sobic010G056300 Sobic004G252500 Sobic004G252500 Sobic001G118400--Sobic004G252500 Sobic006G140700 Sobic006G140700 Sobic001G118400--Sobic006G140700 Sobic007G169100 Sobic007G169100 Sobic003G328100--Sobic007G169100 Sobic003G328100--Sobic001G118400 Sobic003G328100--Sobic006G155500 Sobic003G328100--Sobic006G140700 Sobic007G107700 Sobic007G107700 Sobic003G328100--Sobic007G107700 Sobic003G328100--Sobic001G286600 Sobic010G231500 Sobic010G231500 Sobic003G328100--Sobic010G231500 Sobic004G281900 Sobic004G281900 Sobic003G328100--Sobic004G281900 Sobic006G097500 Sobic006G097500 Sobic003G328100--Sobic006G097500 Sobic006G155500--Sobic001G118400 Sobic006G050400 Sobic006G050400 Sobic006G155500--Sobic006G050400 Sobic006G155500--Sobic003G328100 Sobic003G253300 Sobic003G253300 Sobic006G155500--Sobic003G253300 Sobic006G155500--Sobic001G286600 Sobic006G155500--Sobic006G110900 Sobic006G155500--Sobic002G061900 Sobic006G155500--Sobic003G070900 Sobic006G155500--Sobic006G097500 Sobic006G110900--Sobic003G253300 Sobic006G110900--Sobic001G286600 Sobic006G110900--Sobic006G155500 Sobic006G214700 Sobic006G214700 Sobic006G110900--Sobic006G214700 Sobic008G063200 Sobic008G063200 Sobic006G110900--Sobic008G063200 Sobic006G110900--Sobic001G118400 Sobic004G224500 Sobic004G224500 Sobic006G110900--Sobic004G224500 Sobic006G110900--Sobic003G328100 Sobic006G110900--Sobic006G050400 Sobic002G133900 Sobic002G133900 Sobic003G070900--Sobic002G133900 Sobic003G287900 Sobic003G287900 Sobic003G070900--Sobic003G287900 Sobic009G170200 Sobic009G170200 Sobic003G070900--Sobic009G170200 Sobic003G094350 Sobic003G094350 Sobic003G070900--Sobic003G094350 Sobic003G070900--Sobic001G118400 Sobic001G500600 Sobic001G500600 Sobic003G070900--Sobic001G500600 Sobic004G353100 Sobic004G353100 Sobic003G070900--Sobic004G353100 Sobic008G074000 Sobic008G074000 Sobic003G070900--Sobic008G074000 Sobic003G070900--Sobic008G006100
Octagon: transcription factors


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