Gene annotation
Transcriptome id Sobic.006G050400.3,Sobic.006G050400.2
Synonym Sb06g013740
Functional annotation expressed protein
UniProt A0A1Z5RCC6 , A0A1Z5RCE7
Pfam PF04359
Panther DB PTHR34782 PTHR34782:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27385 : -
RAP-DB (Rice) LOC_Os04g31690.1 : expressed protein
MaizeGDB (Corn) Zm00025a055890 , Zm00025a011782
Brachypodium KQJ82263
Barley HORVU2Hr1G069610.4 , HORVU2Hr1G069610.5 , HORVU2Hr1G069610.1 , HORVU2Hr1G069610.2 , HORVU2Hr1G069610.3 , HORVU2Hr1G069610.8
Wheat TraesCS2A02G282800 , TraesCS2D02G281500 , TraesCS2D02G281500 , TraesCS2B02G300100
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G050400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G342200 dihydroflavonol-4-reductase, putative, expressed -
2 Sobic.006G155500 expressed protein -
3 Sobic.001G175700 expressed protein -
4 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
5 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
6 Sobic.001G005200 expressed protein -
7 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
8 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
10 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
11 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
12 Sobic.004G012900 expressed protein -
13 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
14 Sobic.001G118400 expressed protein -
15 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
16 Sobic.004G333400 COBW domain containing protein, putative, expressed -
17 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
18 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
19 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
20 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -


Gene co-expression network
sample Sobic006G050400 Sobic006G050400 Sobic003G342200 Sobic003G342200 Sobic006G050400--Sobic003G342200 Sobic006G155500 Sobic006G155500 Sobic006G050400--Sobic006G155500 Sobic001G175700 Sobic001G175700 Sobic006G050400--Sobic001G175700 Sobic002G112400 Sobic002G112400 Sobic006G050400--Sobic002G112400 Sobic003G253300 Sobic003G253300 Sobic006G050400--Sobic003G253300 Sobic001G005200 Sobic001G005200 Sobic006G050400--Sobic001G005200 Sobic009G059300 Sobic009G059300 Sobic006G050400--Sobic009G059300 Sobic002G102200 Sobic002G102200 Sobic006G050400--Sobic002G102200 Sobic001G122300 Sobic001G122300 Sobic006G050400--Sobic001G122300 Sobic003G342200--Sobic006G050400 Sobic003G342200--Sobic003G253300 Sobic003G342200--Sobic001G175700 Sobic003G342200--Sobic006G155500 Sobic003G342200--Sobic001G122300 Sobic003G378600 Sobic003G378600 Sobic003G342200--Sobic003G378600 Sobic003G342200--Sobic002G112400 Sobic006G125000 Sobic006G125000 Sobic003G342200--Sobic006G125000 Sobic003G342200--Sobic002G102200 Sobic001G118400 Sobic001G118400 Sobic006G155500--Sobic001G118400 Sobic006G155500--Sobic006G050400 Sobic003G328100 Sobic003G328100 Sobic006G155500--Sobic003G328100 Sobic006G155500--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G155500--Sobic001G286600 Sobic006G110900 Sobic006G110900 Sobic006G155500--Sobic006G110900 Sobic002G061900 Sobic002G061900 Sobic006G155500--Sobic002G061900 Sobic003G070900 Sobic003G070900 Sobic006G155500--Sobic003G070900 Sobic006G097500 Sobic006G097500 Sobic006G155500--Sobic006G097500 Sobic001G175700--Sobic006G050400 Sobic009G131800 Sobic009G131800 Sobic001G175700--Sobic009G131800 Sobic004G012900 Sobic004G012900 Sobic001G175700--Sobic004G012900 Sobic001G405700 Sobic001G405700 Sobic001G175700--Sobic001G405700 Sobic002G233700 Sobic002G233700 Sobic001G175700--Sobic002G233700 Sobic001G175700--Sobic003G342200 Sobic001G083100 Sobic001G083100 Sobic001G175700--Sobic001G083100 Sobic004G253400 Sobic004G253400 Sobic001G175700--Sobic004G253400 Sobic001G175700--Sobic006G155500 Sobic001G128600 Sobic001G128600 Sobic002G112400--Sobic001G128600 Sobic008G006100 Sobic008G006100 Sobic002G112400--Sobic008G006100 Sobic003G160800 Sobic003G160800 Sobic002G112400--Sobic003G160800 Sobic009G062400 Sobic009G062400 Sobic002G112400--Sobic009G062400 Sobic006G265900 Sobic006G265900 Sobic002G112400--Sobic006G265900 Sobic002G112400--Sobic001G122300 Sobic009G056700 Sobic009G056700 Sobic002G112400--Sobic009G056700 Sobic009G237000 Sobic009G237000 Sobic002G112400--Sobic009G237000 Sobic003G387100 Sobic003G387100 Sobic002G112400--Sobic003G387100 Sobic003G253300--Sobic003G342200 Sobic003G253300--Sobic006G110900 Sobic003G253300--Sobic006G155500 Sobic003G253300--Sobic006G050400 Sobic006G214700 Sobic006G214700 Sobic003G253300--Sobic006G214700 Sobic003G284800 Sobic003G284800 Sobic003G253300--Sobic003G284800 Sobic008G063200 Sobic008G063200 Sobic003G253300--Sobic008G063200 Sobic003G253300--Sobic001G118400 Sobic010G076800 Sobic010G076800 Sobic003G253300--Sobic010G076800 Sobic001G005200--Sobic003G378600 Sobic001G005200--Sobic001G128600 Sobic008G102000 Sobic008G102000 Sobic001G005200--Sobic008G102000 Sobic009G140600 Sobic009G140600 Sobic001G005200--Sobic009G140600 Sobic009G175500 Sobic009G175500 Sobic001G005200--Sobic009G175500 Sobic010G245200 Sobic010G245200 Sobic001G005200--Sobic010G245200 Sobic001G005200--Sobic002G233700 Sobic001G005200--Sobic003G387100 Sobic001G005200--Sobic001G122300 Sobic009G059300--Sobic003G387100 Sobic009G059300--Sobic004G012900 Sobic010G005500 Sobic010G005500 Sobic009G059300--Sobic010G005500 Sobic006G207800 Sobic006G207800 Sobic009G059300--Sobic006G207800 Sobic008G171300 Sobic008G171300 Sobic009G059300--Sobic008G171300 Sobic001G309300 Sobic001G309300 Sobic009G059300--Sobic001G309300 Sobic007G052400 Sobic007G052400 Sobic009G059300--Sobic007G052400 Sobic009G030900 Sobic009G030900 Sobic009G059300--Sobic009G030900 Sobic008G073100 Sobic008G073100 Sobic009G059300--Sobic008G073100 Sobic006G101500 Sobic006G101500 Sobic002G102200--Sobic006G101500 Sobic001G391900 Sobic001G391900 Sobic002G102200--Sobic001G391900 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic010G058200 Sobic010G058200 Sobic002G102200--Sobic010G058200 Sobic002G102200--Sobic006G050400 Sobic002G102200--Sobic008G006100 Sobic002G102200--Sobic008G063200 Sobic002G102200--Sobic009G059300 Sobic001G122300--Sobic001G128600 Sobic001G122300--Sobic009G140600 Sobic001G122300--Sobic003G378600 Sobic001G122300--Sobic001G005200 Sobic001G122300--Sobic004G012900 Sobic001G122300--Sobic002G112400 Sobic001G122300--Sobic010G245200 Sobic003G002300 Sobic003G002300 Sobic001G122300--Sobic003G002300 Sobic001G122300--Sobic006G265900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.