Gene annotation
Transcriptome id Sobic.001G118400.1
Synonym Sb01g010450
Functional annotation expressed protein
UniProt C5WN46
Pfam -
Panther DB PTHR36004 PTHR36004:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73885 : -
RAP-DB (Rice) LOC_Os03g50270.1 : expressed protein
MaizeGDB (Corn) Zm00025a017006 , Zm00025a007827
Brachypodium KQK13603
Barley HORVU4Hr1G007260.2 , HORVU4Hr1G007260.1
Wheat TraesCS4D02G045200 , TraesCS4B02G045300 , TraesCS4A02G268900
Populus -


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cDNA sequences
Sobic.001G118400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G155500 expressed protein -
2 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
3 Sobic.003G328100 expressed protein -
4 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
5 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
6 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
7 Sobic.010G056300 PPR repeat domain containing protein, putative, expressed -
8 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
9 Sobic.006G140700 "aldo/keto reductase (AKR) family protein, up-regulated under drought stress , maped into a unique stay green QTL(QSTG3_6)"(PubMedID : 24655390)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.007G107700 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
11 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
12 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
13 Sobic.002G331800 PPR repeat containing protein, expressed -
14 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
15 Sobic.006G050400 expressed protein -
16 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
17 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
18 Sobic.006G025400 - -
19 Sobic.006G193200 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G118400 Sobic001G118400 Sobic006G155500 Sobic006G155500 Sobic001G118400--Sobic006G155500 Sobic003G070900 Sobic003G070900 Sobic001G118400--Sobic003G070900 Sobic003G328100 Sobic003G328100 Sobic001G118400--Sobic003G328100 Sobic004G165900 Sobic004G165900 Sobic001G118400--Sobic004G165900 Sobic001G286600 Sobic001G286600 Sobic001G118400--Sobic001G286600 Sobic002G061900 Sobic002G061900 Sobic001G118400--Sobic002G061900 Sobic010G056300 Sobic010G056300 Sobic001G118400--Sobic010G056300 Sobic004G252500 Sobic004G252500 Sobic001G118400--Sobic004G252500 Sobic006G140700 Sobic006G140700 Sobic001G118400--Sobic006G140700 Sobic006G155500--Sobic001G118400 Sobic006G050400 Sobic006G050400 Sobic006G155500--Sobic006G050400 Sobic006G155500--Sobic003G328100 Sobic003G253300 Sobic003G253300 Sobic006G155500--Sobic003G253300 Sobic006G155500--Sobic001G286600 Sobic006G110900 Sobic006G110900 Sobic006G155500--Sobic006G110900 Sobic006G155500--Sobic002G061900 Sobic006G155500--Sobic003G070900 Sobic006G097500 Sobic006G097500 Sobic006G155500--Sobic006G097500 Sobic002G133900 Sobic002G133900 Sobic003G070900--Sobic002G133900 Sobic003G287900 Sobic003G287900 Sobic003G070900--Sobic003G287900 Sobic009G170200 Sobic009G170200 Sobic003G070900--Sobic009G170200 Sobic003G094350 Sobic003G094350 Sobic003G070900--Sobic003G094350 Sobic003G070900--Sobic001G118400 Sobic001G500600 Sobic001G500600 Sobic003G070900--Sobic001G500600 Sobic004G353100 Sobic004G353100 Sobic003G070900--Sobic004G353100 Sobic008G074000 Sobic008G074000 Sobic003G070900--Sobic008G074000 Sobic008G006100 Sobic008G006100 Sobic003G070900--Sobic008G006100 Sobic007G169100 Sobic007G169100 Sobic003G328100--Sobic007G169100 Sobic003G328100--Sobic001G118400 Sobic003G328100--Sobic006G155500 Sobic003G328100--Sobic006G140700 Sobic007G107700 Sobic007G107700 Sobic003G328100--Sobic007G107700 Sobic003G328100--Sobic001G286600 Sobic010G231500 Sobic010G231500 Sobic003G328100--Sobic010G231500 Sobic004G281900 Sobic004G281900 Sobic003G328100--Sobic004G281900 Sobic003G328100--Sobic006G097500 Sobic004G165900--Sobic004G252500 Sobic003G108900 Sobic003G108900 Sobic004G165900--Sobic003G108900 Sobic004G165900--Sobic010G231500 Sobic004G165900--Sobic006G097500 Sobic004G165900--Sobic001G118400 Sobic001G368600 Sobic001G368600 Sobic004G165900--Sobic001G368600 Sobic009G004100 Sobic009G004100 Sobic004G165900--Sobic009G004100 Sobic006G025400 Sobic006G025400 Sobic004G165900--Sobic006G025400 Sobic004G165900--Sobic002G061900 Sobic004G154400 Sobic004G154400 Sobic001G286600--Sobic004G154400 Sobic009G062400 Sobic009G062400 Sobic001G286600--Sobic009G062400 Sobic010G269400 Sobic010G269400 Sobic001G286600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic001G286600--Sobic010G058200 Sobic001G286600--Sobic001G118400 Sobic001G286600--Sobic003G328100 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic001G286600--Sobic003G070900 Sobic002G061900--Sobic006G097500 Sobic006G265900 Sobic006G265900 Sobic002G061900--Sobic006G265900 Sobic002G061900--Sobic007G169100 Sobic004G124400 Sobic004G124400 Sobic002G061900--Sobic004G124400 Sobic002G061900--Sobic010G231500 Sobic001G128600 Sobic001G128600 Sobic002G061900--Sobic001G128600 Sobic002G061900--Sobic001G118400 Sobic002G061900--Sobic001G368600 Sobic002G061900--Sobic006G155500 Sobic001G535700 Sobic001G535700 Sobic010G056300--Sobic001G535700 Sobic010G056300--Sobic001G118400 Sobic010G056300--Sobic006G155500 Sobic002G331800 Sobic002G331800 Sobic010G056300--Sobic002G331800 Sobic010G183400 Sobic010G183400 Sobic010G056300--Sobic010G183400 Sobic004G055000 Sobic004G055000 Sobic010G056300--Sobic004G055000 Sobic001G175700 Sobic001G175700 Sobic010G056300--Sobic001G175700 Sobic010G056300--Sobic003G253300 Sobic010G056300--Sobic006G050400 Sobic004G252500--Sobic004G165900 Sobic004G252500--Sobic003G108900 Sobic004G252500--Sobic001G118400 Sobic004G300100 Sobic004G300100 Sobic004G252500--Sobic004G300100 Sobic004G252500--Sobic010G231500 Sobic004G252500--Sobic006G025400 Sobic004G252500--Sobic003G070900 Sobic004G252500--Sobic009G004100 Sobic003G125900 Sobic003G125900 Sobic004G252500--Sobic003G125900 Sobic006G140700--Sobic006G025400 Sobic006G140700--Sobic003G328100 Sobic006G140700--Sobic007G169100 Sobic006G140700--Sobic002G061900 Sobic006G140700--Sobic001G118400 Sobic006G140700--Sobic004G165900 Sobic006G140700--Sobic006G097500 Sobic006G140700--Sobic006G155500 Sobic006G140700--Sobic010G231500
Octagon: transcription factors


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