Gene annotation
Transcriptome id Sobic.010G231500.1
Synonym GLUR3, Sb10g027420, ATGLR3.4, GLR3.4
Functional annotation glutamate receptor, putative, expressed
UniProt C5Z858
Pfam PF00497 PF13458 PF00060
Panther DB PTHR18966 PTHR18966:SF250
NCBI CDD KOG1052; Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits
KEGG Orthology K05387; glutamate receptor, ionotropic, plant
Gene Ontology GO:0016020; membrane GO:0004970ionotropic glutamate receptor activity


Orthologs (automatic annotation)
TAIR AT1G05200 : glutamate receptor 3.4
RAP-DB (Rice) LOC_Os06g46670.2 : glutamate receptor, putative, expressed
MaizeGDB (Corn) Zm00025a018130 , Zm00025a018125 , Zm00025a018121
Brachypodium KQK17166 , KQK17165 , PNT75451 , PNT75450 , PNT75452
Barley HORVU1Hr1G086120.10 , HORVU1Hr1G086120.11 , HORVU1Hr1G086120.12 , HORVU1Hr1G086120.13 , HORVU1Hr1G086120.14 , HORVU1Hr1G086120.15 , HORVU1Hr1G086120.16 , HORVU1Hr1G086120.17 , HORVU1Hr1G086120.18 , HORVU1Hr1G086120.19 , HORVU7Hr1G104490.5 , HORVU7Hr1G104490.4 , HORVU7Hr1G104490.7 , HORVU7Hr1G104490.6 , HORVU7Hr1G104490.3 , HORVU7Hr1G104490.2 , HORVU1Hr1G086120.2 , HORVU1Hr1G086120.3 , HORVU1Hr1G086120.1 , HORVU1Hr1G086120.6 , HORVU1Hr1G086120.7 , HORVU1Hr1G086120.4 , HORVU1Hr1G086120.5 , HORVU1Hr1G086120.8 , HORVU1Hr1G086120.9 , HORVU1Hr1G086120.25 , HORVU1Hr1G086120.24 , HORVU1Hr1G086120.21 , HORVU1Hr1G086120.20 , HORVU1Hr1G086120.23 , HORVU1Hr1G086120.22 , HORVU7Hr1G104490.9 , HORVU7Hr1G104490.8
Wheat TraesCS7B02G355500 , TraesCS1A02G390300 , TraesCS1A02G390300 , TraesCS7A02G455200 , TraesCS7D02G444100 , TraesCS7D02G444100 , TraesCS1B02G418500 , TraesCS1B02G418500 , TraesCS1D02G398500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G004100 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
2 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
3 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
4 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
5 Sobic.007G124500 methyltransferase, putative, expressed -
6 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
7 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
8 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
10 Sobic.007G166300 PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
11 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
12 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
13 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
14 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
15 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
16 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
17 Sobic.003G328100 expressed protein -
18 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
19 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
20 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic010G231500 Sobic010G231500 Sobic009G004100 Sobic009G004100 Sobic010G231500--Sobic009G004100 Sobic006G097500 Sobic006G097500 Sobic010G231500--Sobic006G097500 Sobic004G300100 Sobic004G300100 Sobic010G231500--Sobic004G300100 Sobic004G103300 Sobic004G103300 Sobic010G231500--Sobic004G103300 Sobic007G124500 Sobic007G124500 Sobic010G231500--Sobic007G124500 Sobic005G028800 Sobic005G028800 Sobic010G231500--Sobic005G028800 Sobic004G124400 Sobic004G124400 Sobic010G231500--Sobic004G124400 Sobic001G368600 Sobic001G368600 Sobic010G231500--Sobic001G368600 Sobic002G356900 Sobic002G356900 Sobic010G231500--Sobic002G356900 Sobic009G004100--Sobic010G231500 Sobic009G004100--Sobic001G368600 Sobic009G004100--Sobic007G124500 Sobic009G004100--Sobic006G097500 Sobic007G166300 Sobic007G166300 Sobic009G004100--Sobic007G166300 Sobic009G004100--Sobic004G103300 Sobic010G100900 Sobic010G100900 Sobic009G004100--Sobic010G100900 Sobic009G004100--Sobic005G028800 Sobic002G072500 Sobic002G072500 Sobic009G004100--Sobic002G072500 Sobic002G061900 Sobic002G061900 Sobic006G097500--Sobic002G061900 Sobic002G298800 Sobic002G298800 Sobic006G097500--Sobic002G298800 Sobic006G097500--Sobic004G103300 Sobic006G265900 Sobic006G265900 Sobic006G097500--Sobic006G265900 Sobic006G097500--Sobic001G368600 Sobic006G097500--Sobic010G231500 Sobic007G169100 Sobic007G169100 Sobic006G097500--Sobic007G169100 Sobic005G005400 Sobic005G005400 Sobic006G097500--Sobic005G005400 Sobic006G097500--Sobic005G028800 Sobic004G300100--Sobic010G231500 Sobic004G300100--Sobic002G356900 Sobic004G317700 Sobic004G317700 Sobic004G300100--Sobic004G317700 Sobic002G081400 Sobic002G081400 Sobic004G300100--Sobic002G081400 Sobic004G271600 Sobic004G271600 Sobic004G300100--Sobic004G271600 Sobic009G170200 Sobic009G170200 Sobic004G300100--Sobic009G170200 Sobic002G132400 Sobic002G132400 Sobic004G300100--Sobic002G132400 Sobic004G165900 Sobic004G165900 Sobic004G300100--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic004G300100--Sobic004G252500 Sobic001G509200 Sobic001G509200 Sobic004G103300--Sobic001G509200 Sobic004G103300--Sobic007G166300 Sobic001G393300 Sobic001G393300 Sobic004G103300--Sobic001G393300 Sobic004G103300--Sobic001G368600 Sobic004G103300--Sobic002G298800 Sobic007G108900 Sobic007G108900 Sobic004G103300--Sobic007G108900 Sobic004G103300--Sobic006G097500 Sobic004G103300--Sobic005G028800 Sobic007G135800 Sobic007G135800 Sobic004G103300--Sobic007G135800 Sobic007G124500--Sobic002G072500 Sobic001G411100 Sobic001G411100 Sobic007G124500--Sobic001G411100 Sobic007G124500--Sobic007G166300 Sobic007G124500--Sobic001G509200 Sobic007G124500--Sobic010G100900 Sobic002G351200 Sobic002G351200 Sobic007G124500--Sobic002G351200 Sobic007G124500--Sobic004G103300 Sobic007G124500--Sobic010G231500 Sobic007G124500--Sobic001G393300 Sobic005G028800--Sobic007G166300 Sobic005G028800--Sobic004G103300 Sobic005G028800--Sobic001G509200 Sobic005G028800--Sobic004G124400 Sobic001G015200 Sobic001G015200 Sobic005G028800--Sobic001G015200 Sobic005G028800--Sobic007G135800 Sobic005G028800--Sobic010G231500 Sobic005G028800--Sobic001G393300 Sobic005G028800--Sobic007G124500 Sobic004G124400--Sobic005G028800 Sobic006G063900 Sobic006G063900 Sobic004G124400--Sobic006G063900 Sobic004G124400--Sobic007G166300 Sobic001G167900 Sobic001G167900 Sobic004G124400--Sobic001G167900 Sobic004G124400--Sobic010G231500 Sobic004G124400--Sobic002G061900 Sobic004G124400--Sobic006G097500 Sobic001G436400 Sobic001G436400 Sobic004G124400--Sobic001G436400 Sobic004G359600 Sobic004G359600 Sobic004G124400--Sobic004G359600 Sobic001G368600--Sobic004G103300 Sobic001G368600--Sobic006G097500 Sobic001G368600--Sobic002G298800 Sobic001G368600--Sobic001G393300 Sobic001G368600--Sobic007G135800 Sobic001G368600--Sobic002G072500 Sobic002G198300 Sobic002G198300 Sobic001G368600--Sobic002G198300 Sobic001G368600--Sobic007G166300 Sobic006G025500 Sobic006G025500 Sobic001G368600--Sobic006G025500 Sobic002G356900--Sobic010G100900 Sobic007G087100 Sobic007G087100 Sobic002G356900--Sobic007G087100 Sobic002G356900--Sobic004G300100 Sobic003G380200 Sobic003G380200 Sobic002G356900--Sobic003G380200 Sobic002G356900--Sobic009G170200 Sobic007G010800 Sobic007G010800 Sobic002G356900--Sobic007G010800 Sobic004G268400 Sobic004G268400 Sobic002G356900--Sobic004G268400 Sobic002G356900--Sobic010G231500 Sobic002G356900--Sobic004G317700
Octagon: transcription factors


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