Gene annotation
| Transcriptome id | Sobic.007G124500.1 |
|---|---|
| Synonym | Sb07g020130 |
| Functional annotation | methyltransferase, putative, expressed |
| UniProt | C5YKU1 |
| Pfam | PF08241 |
| Panther DB | PTHR10108 PTHR10108:SF702 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0008168; methyltransferase activity GO:0008152metabolic process |
Orthologs (automatic annotation)
| TAIR | AT1G78140 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os08g31750.1 : methyltransferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a006072 |
| Brachypodium | KQJ98234 , KQJ98235 , KQJ98236 , KQJ98233 |
| Barley | HORVU2Hr1G078410.1 , HORVU2Hr1G078410.2 , HORVU2Hr1G078410.3 , HORVU2Hr1G078410.4 , HORVU6Hr1G068670.4 , HORVU6Hr1G068670.1 , HORVU6Hr1G068670.3 , HORVU6Hr1G068670.2 |
| Wheat | TraesCS6D02G243900 , TraesCS6B02G298300 , TraesCS6A02G271200 , TraesCS6A02G271200 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G072500 | expressed protein | - |
| 2 | Sobic.001G411100 | expressed protein | - |
| 3 | Sobic.007G166300 | PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed | K00051: malate dehydrogenase (NADP+) |
| 4 | Sobic.001G509200 | "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed | K11159: carotenoid cleavage oxygenase |
| 5 | Sobic.010G100900 | alanyl-tRNA synthetase, putative, expressed | K01872: AARS, alanyl-tRNA synthetase |
| 6 | Sobic.002G351200 | hydrolase, alpha/beta fold family domain containing protein, expressed | - |
| 7 | Sobic.004G103300 | Complex I intermediate-associated protein 30 domain containing protein, putative, expressed | - |
| 8 | Sobic.010G231500 | glutamate receptor, putative, expressed | K05387: glutamate receptor, ionotropic, plant |
| 9 | Sobic.001G393300 | HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed | - |
| 10 | Sobic.005G028800 | astaxanthin synthase KC28, putative, expressed | - |
| 11 | Sobic.009G004100 | -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed | K15918: D-glycerate 3-kinase |
| 12 | Sobic.004G268400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed | - |
| 13 | Sobic.001G018000 | amine oxidase, flavin-containing, domain containing protein, expressed | - |
| 14 | Sobic.002G030900 | oxidoreductase, aldo/keto reductase family protein, putative, expressed | - |
| 15 | Sobic.002G081400 | ABC1 family domain containing protein, putative, expressed | K08869: ADCK, aarF domain-containing kinase |
| 16 | Sobic.004G271600 | region found in RelA/SpoT proteins containing protein, expressed | - |
| 17 | Sobic.002G132400 | -(PubMedID : 26465154)@expressed protein | - |
| 18 | Sobic.010G207100 | methyltransferase domain containing protein, putative, expressed | - |
| 19 | Sobic.001G015200 | Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed | - |
| 20 | Sobic.001G368600 | NAD dependent epimerase/dehydratase family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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