Gene annotation
| Transcriptome id | Sobic.009G004100.1,Sobic.009G004100.2 |
|---|---|
| Synonym | Sb09g000560, GLYK |
| Functional annotation | - (PubMedID : 26976818) uncharacterized kinase mug58, putative, expressed |
| UniProt | C5YY08 , A0A1B6P5S2 |
| Pfam | - |
| Panther DB | PTHR10285 PTHR10285:SF78 |
| NCBI CDD | KOG2878; Predicted kinase |
| KEGG Orthology | K15918; D-glycerate 3-kinase |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G80380 : P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g48990.1 : uncharacterized kinase mug58, putative, expressed |
| MaizeGDB (Corn) | Zm00025a040988 , Zm00025a028016 |
| Brachypodium | KQK09211 , KQK09210 |
| Barley | HORVU3Hr1G063280.14 , HORVU3Hr1G063280.12 , HORVU3Hr1G063280.13 , HORVU3Hr1G063280.10 , HORVU3Hr1G063280.11 , HORVU3Hr1G063280.8 , HORVU3Hr1G063280.4 , HORVU3Hr1G063280.5 , HORVU3Hr1G063280.6 , HORVU3Hr1G063280.7 , HORVU3Hr1G063280.2 , HORVU3Hr1G063280.3 |
| Wheat | TraesCS3B02G299300 , TraesCS3B02G299300 , TraesCS3A02G265900 , TraesCS3D02G266100 , TraesCS3D02G266100 , TraesCS3A02G265900 |
| Populus | - |
JBrowse
| Sobic.009G004100 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.010G231500 | glutamate receptor, putative, expressed | K05387: glutamate receptor, ionotropic, plant |
| 2 | Sobic.001G368600 | NAD dependent epimerase/dehydratase family protein, putative, expressed | - |
| 3 | Sobic.007G124500 | methyltransferase, putative, expressed | - |
| 4 | Sobic.006G097500 | zeaxanthin epoxidase, chloroplast precursor, putative, expressed | K09838: ZEP, zeaxanthin epoxidase |
| 5 | Sobic.007G166300 | PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed | K00051: malate dehydrogenase (NADP+) |
| 6 | Sobic.004G103300 | Complex I intermediate-associated protein 30 domain containing protein, putative, expressed | - |
| 7 | Sobic.010G100900 | alanyl-tRNA synthetase, putative, expressed | K01872: AARS, alanyl-tRNA synthetase |
| 8 | Sobic.005G028800 | astaxanthin synthase KC28, putative, expressed | - |
| 9 | Sobic.002G072500 | expressed protein | - |
| 10 | Sobic.002G132400 | -(PubMedID : 26465154)@expressed protein | - |
| 11 | Sobic.001G393300 | HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed | - |
| 12 | Sobic.004G268400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed | - |
| 13 | Sobic.004G165900 | SOUL heme-binding protein, putative, expressed | - |
| 14 | Sobic.002G298800 | PAP fibrillin family domain containing protein, expressed | - |
| 15 | Sobic.002G061900 | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed | - |
| 16 | Sobic.007G135800 | ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed | K06891: ATP-dependent Clp protease adaptor protein ClpS |
| 17 | Sobic.002G356900 | threonyl-tRNA synthetase, putative, expressed | K01868: TARS, threonyl-tRNA synthetase |
| 18 | Sobic.004G124400 | uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed | - |
| 19 | Sobic.009G170200 | translation initiation factor IF-2, chloroplast precursor, putative, expressed | K02519: infB, translation initiation factor IF-2 |
| 20 | Sobic.004G271600 | region found in RelA/SpoT proteins containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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