Gene annotation
Transcriptome id Sobic.004G252500.1
Synonym Sb04g029200, SPPA1, SPPA
Functional annotation OsProtIV1 - Putative Protease IV homologue
Domain 2 is a SPH, expressed
UniProt C5XZE9
Pfam PF01343
Panther DB PTHR33209 PTHR33209:SF1
NCBI CDD -
KEGG Orthology K04773; protease IV
Gene Ontology GO:0008233; peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G73990 : signal peptide peptidase
RAP-DB (Rice) LOC_Os02g49570.1 : OsProtIV1 - Putative Protease IV homologue; Domain 2 is a SPH, expressed
MaizeGDB (Corn) Zm00025a032620
Brachypodium KQK01506
Barley HORVU6Hr1G072540.12 , HORVU6Hr1G072540.13 , HORVU6Hr1G072540.10 , HORVU6Hr1G072540.11 , HORVU6Hr1G072540.8 , HORVU6Hr1G072540.9 , HORVU6Hr1G072540.2 , HORVU6Hr1G072540.3 , HORVU6Hr1G072540.4 , HORVU6Hr1G072540.5 , HORVU6Hr1G072540.6 , HORVU6Hr1G072540.7
Wheat TraesCS6D02G269700 , TraesCS6A02G289200 , TraesCS6B02G319000
Populus -


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cDNA sequences
Sobic.004G252500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
2 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
3 Sobic.001G118400 expressed protein -
4 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
5 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
6 Sobic.006G025400 - -
7 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
8 Sobic.009G004100 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
9 Sobic.003G125900 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed K02470: DNA gyrase subunit B
10 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
11 Sobic.006G025500 - -
12 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
13 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
14 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
15 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
16 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
17 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
18 Sobic.007G124500 methyltransferase, putative, expressed -
19 Sobic.004G307100 M16 domain containing zinc peptidase, putative, expressed K06972: PITRM1, PreP, presequence protease
20 Sobic.001G060500 YT521-B, putative, expressed -


Gene co-expression network
sample Sobic004G252500 Sobic004G252500 Sobic004G165900 Sobic004G165900 Sobic004G252500--Sobic004G165900 Sobic003G108900 Sobic003G108900 Sobic004G252500--Sobic003G108900 Sobic001G118400 Sobic001G118400 Sobic004G252500--Sobic001G118400 Sobic004G300100 Sobic004G300100 Sobic004G252500--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic004G252500--Sobic010G231500 Sobic006G025400 Sobic006G025400 Sobic004G252500--Sobic006G025400 Sobic003G070900 Sobic003G070900 Sobic004G252500--Sobic003G070900 Sobic009G004100 Sobic009G004100 Sobic004G252500--Sobic009G004100 Sobic003G125900 Sobic003G125900 Sobic004G252500--Sobic003G125900 Sobic004G165900--Sobic004G252500 Sobic004G165900--Sobic003G108900 Sobic004G165900--Sobic010G231500 Sobic006G097500 Sobic006G097500 Sobic004G165900--Sobic006G097500 Sobic004G165900--Sobic001G118400 Sobic001G368600 Sobic001G368600 Sobic004G165900--Sobic001G368600 Sobic004G165900--Sobic009G004100 Sobic004G165900--Sobic006G025400 Sobic002G061900 Sobic002G061900 Sobic004G165900--Sobic002G061900 Sobic003G108900--Sobic004G165900 Sobic003G108900--Sobic004G252500 Sobic003G108900--Sobic004G300100 Sobic003G108900--Sobic010G231500 Sobic002G173100 Sobic002G173100 Sobic003G108900--Sobic002G173100 Sobic004G300000 Sobic004G300000 Sobic003G108900--Sobic004G300000 Sobic009G014100 Sobic009G014100 Sobic003G108900--Sobic009G014100 Sobic004G271600 Sobic004G271600 Sobic003G108900--Sobic004G271600 Sobic004G207400 Sobic004G207400 Sobic003G108900--Sobic004G207400 Sobic006G155500 Sobic006G155500 Sobic001G118400--Sobic006G155500 Sobic001G118400--Sobic003G070900 Sobic003G328100 Sobic003G328100 Sobic001G118400--Sobic003G328100 Sobic001G118400--Sobic004G165900 Sobic001G286600 Sobic001G286600 Sobic001G118400--Sobic001G286600 Sobic001G118400--Sobic002G061900 Sobic010G056300 Sobic010G056300 Sobic001G118400--Sobic010G056300 Sobic001G118400--Sobic004G252500 Sobic006G140700 Sobic006G140700 Sobic001G118400--Sobic006G140700 Sobic004G300100--Sobic010G231500 Sobic002G356900 Sobic002G356900 Sobic004G300100--Sobic002G356900 Sobic004G317700 Sobic004G317700 Sobic004G300100--Sobic004G317700 Sobic002G081400 Sobic002G081400 Sobic004G300100--Sobic002G081400 Sobic004G300100--Sobic004G271600 Sobic009G170200 Sobic009G170200 Sobic004G300100--Sobic009G170200 Sobic002G132400 Sobic002G132400 Sobic004G300100--Sobic002G132400 Sobic004G300100--Sobic004G165900 Sobic004G300100--Sobic004G252500 Sobic010G231500--Sobic009G004100 Sobic010G231500--Sobic006G097500 Sobic010G231500--Sobic004G300100 Sobic004G103300 Sobic004G103300 Sobic010G231500--Sobic004G103300 Sobic007G124500 Sobic007G124500 Sobic010G231500--Sobic007G124500 Sobic005G028800 Sobic005G028800 Sobic010G231500--Sobic005G028800 Sobic004G124400 Sobic004G124400 Sobic010G231500--Sobic004G124400 Sobic010G231500--Sobic001G368600 Sobic010G231500--Sobic002G356900 Sobic006G025400--Sobic006G140700 Sobic006G025400--Sobic004G165900 Sobic006G025400--Sobic002G061900 Sobic006G025400--Sobic004G252500 Sobic006G025400--Sobic001G118400 Sobic006G025500 Sobic006G025500 Sobic006G025400--Sobic006G025500 Sobic006G025400--Sobic004G124400 Sobic006G025400--Sobic001G368600 Sobic006G025400--Sobic006G097500 Sobic002G133900 Sobic002G133900 Sobic003G070900--Sobic002G133900 Sobic003G287900 Sobic003G287900 Sobic003G070900--Sobic003G287900 Sobic003G070900--Sobic009G170200 Sobic003G094350 Sobic003G094350 Sobic003G070900--Sobic003G094350 Sobic003G070900--Sobic001G118400 Sobic001G500600 Sobic001G500600 Sobic003G070900--Sobic001G500600 Sobic004G353100 Sobic004G353100 Sobic003G070900--Sobic004G353100 Sobic008G074000 Sobic008G074000 Sobic003G070900--Sobic008G074000 Sobic008G006100 Sobic008G006100 Sobic003G070900--Sobic008G006100 Sobic009G004100--Sobic010G231500 Sobic009G004100--Sobic001G368600 Sobic009G004100--Sobic007G124500 Sobic009G004100--Sobic006G097500 Sobic007G166300 Sobic007G166300 Sobic009G004100--Sobic007G166300 Sobic009G004100--Sobic004G103300 Sobic010G100900 Sobic010G100900 Sobic009G004100--Sobic010G100900 Sobic009G004100--Sobic005G028800 Sobic002G072500 Sobic002G072500 Sobic009G004100--Sobic002G072500 Sobic002G331800 Sobic002G331800 Sobic003G125900--Sobic002G331800 Sobic004G179400 Sobic004G179400 Sobic003G125900--Sobic004G179400 Sobic003G125900--Sobic003G070900 Sobic003G125900--Sobic003G094350 Sobic001G060500 Sobic001G060500 Sobic003G125900--Sobic001G060500 Sobic003G125900--Sobic001G118400 Sobic003G125900--Sobic004G252500 Sobic002G028400 Sobic002G028400 Sobic003G125900--Sobic002G028400 Sobic003G125900--Sobic001G500600
Octagon: transcription factors


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