Gene annotation
Transcriptome id Sobic.003G108900.2,Sobic.003G108900.1
Synonym Sb03g009150
Functional annotation - (PubMedID : 26465154)
peptidase, putative, expressed
UniProt A0A1B6Q2L3 , A0A1B6Q2K4
Pfam PF01435
Panther DB PTHR10120 PTHR10120:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004222metalloendopeptidase activity


Orthologs (automatic annotation)
TAIR AT3G27110 : Peptidase family M48 family protein
RAP-DB (Rice) LOC_Os01g73910.2 : peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a056640 , Zm00025a054599 , Zm00025a030369 , Zm00025a008403
Brachypodium PNT69964
Barley HORVU3Hr1G015050.8 , HORVU3Hr1G015050.4 , HORVU3Hr1G015050.6 , HORVU3Hr1G015050.7 , HORVU3Hr1G015050.1 , HORVU3Hr1G015050.2 , HORVU3Hr1G015050.3 , HORVU3Hr1G015050.16 , HORVU3Hr1G015050.17 , HORVU3Hr1G015050.15 , HORVU3Hr1G015050.10 , HORVU3Hr1G015050.11
Wheat TraesCS3B02G099400 , TraesCS3B02G099400 , TraesCS3A02G084500 , TraesCS3A02G084500 , TraesCS3D02G084400 , TraesCS3D02G084400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
2 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
3 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
4 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
5 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
6 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
7 Sobic.009G014100 OsFBX178 - F-box domain containing protein, expressed -
8 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
9 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
10 Sobic.003G203300 stress regulated protein, putative, expressed -
11 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
12 Sobic.002G073200 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
13 Sobic.005G005400 MATE efflux family protein(PubMedID : 26465154)@MATE efflux protein, putative, expressed -
14 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.009G004100 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
16 Sobic.001G060500 YT521-B, putative, expressed -
17 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
18 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
19 Sobic.006G193200 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein


Gene co-expression network
sample Sobic003G108900 Sobic003G108900 Sobic004G165900 Sobic004G165900 Sobic003G108900--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic003G108900--Sobic004G252500 Sobic004G300100 Sobic004G300100 Sobic003G108900--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic003G108900--Sobic010G231500 Sobic002G173100 Sobic002G173100 Sobic003G108900--Sobic002G173100 Sobic004G300000 Sobic004G300000 Sobic003G108900--Sobic004G300000 Sobic009G014100 Sobic009G014100 Sobic003G108900--Sobic009G014100 Sobic004G271600 Sobic004G271600 Sobic003G108900--Sobic004G271600 Sobic004G207400 Sobic004G207400 Sobic003G108900--Sobic004G207400 Sobic004G165900--Sobic004G252500 Sobic004G165900--Sobic003G108900 Sobic004G165900--Sobic010G231500 Sobic006G097500 Sobic006G097500 Sobic004G165900--Sobic006G097500 Sobic001G118400 Sobic001G118400 Sobic004G165900--Sobic001G118400 Sobic001G368600 Sobic001G368600 Sobic004G165900--Sobic001G368600 Sobic009G004100 Sobic009G004100 Sobic004G165900--Sobic009G004100 Sobic006G025400 Sobic006G025400 Sobic004G165900--Sobic006G025400 Sobic002G061900 Sobic002G061900 Sobic004G165900--Sobic002G061900 Sobic004G252500--Sobic004G165900 Sobic004G252500--Sobic003G108900 Sobic004G252500--Sobic001G118400 Sobic004G252500--Sobic004G300100 Sobic004G252500--Sobic010G231500 Sobic004G252500--Sobic006G025400 Sobic003G070900 Sobic003G070900 Sobic004G252500--Sobic003G070900 Sobic004G252500--Sobic009G004100 Sobic003G125900 Sobic003G125900 Sobic004G252500--Sobic003G125900 Sobic004G300100--Sobic010G231500 Sobic002G356900 Sobic002G356900 Sobic004G300100--Sobic002G356900 Sobic004G317700 Sobic004G317700 Sobic004G300100--Sobic004G317700 Sobic002G081400 Sobic002G081400 Sobic004G300100--Sobic002G081400 Sobic004G300100--Sobic004G271600 Sobic009G170200 Sobic009G170200 Sobic004G300100--Sobic009G170200 Sobic002G132400 Sobic002G132400 Sobic004G300100--Sobic002G132400 Sobic004G300100--Sobic004G165900 Sobic004G300100--Sobic004G252500 Sobic010G231500--Sobic009G004100 Sobic010G231500--Sobic006G097500 Sobic010G231500--Sobic004G300100 Sobic004G103300 Sobic004G103300 Sobic010G231500--Sobic004G103300 Sobic007G124500 Sobic007G124500 Sobic010G231500--Sobic007G124500 Sobic005G028800 Sobic005G028800 Sobic010G231500--Sobic005G028800 Sobic004G124400 Sobic004G124400 Sobic010G231500--Sobic004G124400 Sobic010G231500--Sobic001G368600 Sobic010G231500--Sobic002G356900 Sobic003G190100 Sobic003G190100 Sobic002G173100--Sobic003G190100 Sobic002G173100--Sobic003G108900 Sobic003G203300 Sobic003G203300 Sobic002G173100--Sobic003G203300 Sobic001G060500 Sobic001G060500 Sobic002G173100--Sobic001G060500 Sobic003G190000 Sobic003G190000 Sobic002G173100--Sobic003G190000 Sobic005G075100 Sobic005G075100 Sobic002G173100--Sobic005G075100 Sobic002G173100--Sobic004G271600 Sobic005G179300 Sobic005G179300 Sobic002G173100--Sobic005G179300 Sobic002G173100--Sobic004G300000 Sobic010G035500 Sobic010G035500 Sobic004G300000--Sobic010G035500 Sobic002G025700 Sobic002G025700 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic006G214700 Sobic006G214700 Sobic004G300000--Sobic006G214700 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic009G014100--Sobic010G197000 Sobic008G172300 Sobic008G172300 Sobic009G014100--Sobic008G172300 Sobic002G073200 Sobic002G073200 Sobic009G014100--Sobic002G073200 Sobic009G014100--Sobic003G108900 Sobic004G026500 Sobic004G026500 Sobic009G014100--Sobic004G026500 Sobic009G014100--Sobic002G354600 Sobic004G333400 Sobic004G333400 Sobic009G014100--Sobic004G333400 Sobic009G014100--Sobic003G190000 Sobic002G168300 Sobic002G168300 Sobic009G014100--Sobic002G168300 Sobic004G271600--Sobic002G132400 Sobic004G271600--Sobic002G081400 Sobic010G100900 Sobic010G100900 Sobic004G271600--Sobic010G100900 Sobic002G351200 Sobic002G351200 Sobic004G271600--Sobic002G351200 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic006G090100 Sobic006G090100 Sobic004G271600--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic004G271600--Sobic001G509200 Sobic002G060800 Sobic002G060800 Sobic004G271600--Sobic002G060800 Sobic002G072400 Sobic002G072400 Sobic004G207400--Sobic002G072400 Sobic006G232600 Sobic006G232600 Sobic004G207400--Sobic006G232600 Sobic004G238200 Sobic004G238200 Sobic004G207400--Sobic004G238200 Sobic004G207400--Sobic009G170200 Sobic004G207400--Sobic003G203300 Sobic002G225100 Sobic002G225100 Sobic004G207400--Sobic002G225100 Sobic004G207400--Sobic004G300100 Sobic004G281900 Sobic004G281900 Sobic004G207400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic004G207400--Sobic007G166200
Octagon: transcription factors


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