Gene annotation
Transcriptome id Sobic.002G073200.1,Sobic.002G073200.2
Synonym Sb02g006140
Functional annotation peptidase, M24 family protein, putative, expressed
UniProt C5XCQ0 , A0A1B6Q9Q3
Pfam PF01321 PF16188 PF00557 PF16189 PF16188 PF00557 PF16189
Panther DB PTHR10804 PTHR10804:SF90
NCBI CDD -
KEGG Orthology K01262; Xaa-Pro aminopeptidase
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G05350 : Metallopeptidase M24 family protein
RAP-DB (Rice) LOC_Os07g10540.1,LOC_Os07g10540.2 : peptidase, M24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a045355
Brachypodium KQK20408 , KQK20407 , KQK20406 , KQK20405
Barley HORVU1Hr1G042060.6 , HORVU1Hr1G042060.5 , HORVU1Hr1G042060.4 , HORVU1Hr1G042060.3 , HORVU1Hr1G042060.1
Wheat TraesCS1A02G158800 , TraesCS1D02G156100 , TraesCS1A02G158800 , TraesCS1B02G175400 , TraesCS1B02G175400 , TraesCS1B02G175400 , TraesCS1D02G156100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G014100 OsFBX178 - F-box domain containing protein, expressed -
2 Sobic.001G060500 YT521-B, putative, expressed -
3 Sobic.003G190000 PPR repeat domain containing protein, putative, expressed -
4 Sobic.002G418600 expressed protein K15710: E3 ubiquitin-protein ligase SHPRH
5 Sobic.003G203300 stress regulated protein, putative, expressed -
6 Sobic.010G110400 - -
7 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
8 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
9 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
10 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
11 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
12 Sobic.007G162600 uncharacterized protein all1601, putative, expressed K18010: 7-hydroxymethyl chlorophyll a reductase
13 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
14 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
15 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
16 Sobic.006G197300 expressed protein -
17 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
18 Sobic.003G125900 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed K02470: DNA gyrase subunit B
19 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
20 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic002G073200 Sobic002G073200 Sobic009G014100 Sobic009G014100 Sobic002G073200--Sobic009G014100 Sobic001G060500 Sobic001G060500 Sobic002G073200--Sobic001G060500 Sobic003G190000 Sobic003G190000 Sobic002G073200--Sobic003G190000 Sobic002G418600 Sobic002G418600 Sobic002G073200--Sobic002G418600 Sobic003G203300 Sobic003G203300 Sobic002G073200--Sobic003G203300 Sobic010G110400 Sobic010G110400 Sobic002G073200--Sobic010G110400 Sobic003G108900 Sobic003G108900 Sobic002G073200--Sobic003G108900 Sobic001G500600 Sobic001G500600 Sobic002G073200--Sobic001G500600 Sobic006G233700 Sobic006G233700 Sobic002G073200--Sobic006G233700 Sobic010G197000 Sobic010G197000 Sobic009G014100--Sobic010G197000 Sobic008G172300 Sobic008G172300 Sobic009G014100--Sobic008G172300 Sobic009G014100--Sobic002G073200 Sobic009G014100--Sobic003G108900 Sobic004G026500 Sobic004G026500 Sobic009G014100--Sobic004G026500 Sobic002G354600 Sobic002G354600 Sobic009G014100--Sobic002G354600 Sobic004G333400 Sobic004G333400 Sobic009G014100--Sobic004G333400 Sobic009G014100--Sobic003G190000 Sobic002G168300 Sobic002G168300 Sobic009G014100--Sobic002G168300 Sobic001G060500--Sobic006G233700 Sobic004G179400 Sobic004G179400 Sobic001G060500--Sobic004G179400 Sobic001G060500--Sobic002G073200 Sobic001G060500--Sobic003G190000 Sobic001G060500--Sobic003G203300 Sobic002G173100 Sobic002G173100 Sobic001G060500--Sobic002G173100 Sobic001G060500--Sobic010G110400 Sobic003G125900 Sobic003G125900 Sobic001G060500--Sobic003G125900 Sobic001G060500--Sobic003G108900 Sobic003G190000--Sobic001G060500 Sobic003G190000--Sobic002G073200 Sobic003G190000--Sobic002G173100 Sobic003G190000--Sobic010G197000 Sobic003G190000--Sobic003G203300 Sobic003G190000--Sobic009G014100 Sobic005G075100 Sobic005G075100 Sobic003G190000--Sobic005G075100 Sobic005G142800 Sobic005G142800 Sobic003G190000--Sobic005G142800 Sobic001G219700 Sobic001G219700 Sobic003G190000--Sobic001G219700 Sobic002G181000 Sobic002G181000 Sobic002G418600--Sobic002G181000 Sobic002G418600--Sobic002G073200 Sobic002G418600--Sobic006G233700 Sobic002G418600--Sobic005G142800 Sobic002G418600--Sobic004G333400 Sobic004G165000 Sobic004G165000 Sobic002G418600--Sobic004G165000 Sobic002G418600--Sobic001G500600 Sobic003G334100 Sobic003G334100 Sobic002G418600--Sobic003G334100 Sobic002G418600--Sobic009G014100 Sobic006G232600 Sobic006G232600 Sobic003G203300--Sobic006G232600 Sobic008G074000 Sobic008G074000 Sobic003G203300--Sobic008G074000 Sobic001G378100 Sobic001G378100 Sobic003G203300--Sobic001G378100 Sobic009G093100 Sobic009G093100 Sobic003G203300--Sobic009G093100 Sobic009G170200 Sobic009G170200 Sobic003G203300--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic003G203300--Sobic006G233700 Sobic004G207400 Sobic004G207400 Sobic003G203300--Sobic004G207400 Sobic010G110400--Sobic006G233700 Sobic010G110400--Sobic003G203300 Sobic010G110400--Sobic009G170200 Sobic002G198300 Sobic002G198300 Sobic010G110400--Sobic002G198300 Sobic010G110400--Sobic001G500600 Sobic004G300100 Sobic004G300100 Sobic010G110400--Sobic004G300100 Sobic003G070900 Sobic003G070900 Sobic010G110400--Sobic003G070900 Sobic006G197300 Sobic006G197300 Sobic010G110400--Sobic006G197300 Sobic010G110400--Sobic001G378100 Sobic004G165900 Sobic004G165900 Sobic003G108900--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic003G108900--Sobic004G252500 Sobic003G108900--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic003G108900--Sobic010G231500 Sobic003G108900--Sobic002G173100 Sobic004G300000 Sobic004G300000 Sobic003G108900--Sobic004G300000 Sobic003G108900--Sobic009G014100 Sobic004G271600 Sobic004G271600 Sobic003G108900--Sobic004G271600 Sobic003G108900--Sobic004G207400 Sobic003G094350 Sobic003G094350 Sobic001G500600--Sobic003G094350 Sobic004G336200 Sobic004G336200 Sobic001G500600--Sobic004G336200 Sobic001G500600--Sobic006G197300 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic003G287900 Sobic003G287900 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900 Sobic006G233700--Sobic006G232600 Sobic006G233700--Sobic001G500600 Sobic006G233700--Sobic010G110400 Sobic006G233700--Sobic009G170200 Sobic006G233700--Sobic001G060500 Sobic006G233700--Sobic003G203300 Sobic010G171600 Sobic010G171600 Sobic006G233700--Sobic010G171600 Sobic006G233700--Sobic003G070900 Sobic006G233700--Sobic001G219700
Octagon: transcription factors


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