Gene annotation
Transcriptome id Sobic.001G060500.2,Sobic.001G060500.1
Synonym Sb01g005500, ECT3
Functional annotation YT521-B, putative, expressed
UniProt A0A1B6QHK9 , C5WY21
Pfam PF04146
Panther DB PTHR12357 PTHR12357:SF27
NCBI CDD KOG1901; Uncharacterized high-glucose-regulated protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61020 : evolutionarily conserved C-terminal region 3
RAP-DB (Rice) LOC_Os07g07490.1 : YT521-B, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G104390.1 , HORVU5Hr1G104390.2 , HORVU5Hr1G104390.3 , HORVU5Hr1G104390.4 , HORVU5Hr1G104390.6 , HORVU5Hr1G104390.7 , HORVU5Hr1G104390.8 , HORVU5Hr1G104390.9
Wheat TraesCS5B02G432900 , TraesCS5B02G432900 , TraesCS5D02G439200 , TraesCS5A02G431100
Populus -


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cDNA sequences
Sobic.001G060500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
2 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
3 Sobic.002G073200 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
4 Sobic.003G190000 PPR repeat domain containing protein, putative, expressed -
5 Sobic.003G203300 stress regulated protein, putative, expressed -
6 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
7 Sobic.010G110400 - -
8 Sobic.003G125900 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed K02470: DNA gyrase subunit B
9 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
10 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
11 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
12 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
13 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
14 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
15 Sobic.010G110332 - -
16 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
17 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
18 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor
19 Sobic.001G540600 expressed protein -
20 Sobic.006G212800 expressed protein -


Gene co-expression network
sample Sobic001G060500 Sobic001G060500 Sobic006G233700 Sobic006G233700 Sobic001G060500--Sobic006G233700 Sobic004G179400 Sobic004G179400 Sobic001G060500--Sobic004G179400 Sobic002G073200 Sobic002G073200 Sobic001G060500--Sobic002G073200 Sobic003G190000 Sobic003G190000 Sobic001G060500--Sobic003G190000 Sobic003G203300 Sobic003G203300 Sobic001G060500--Sobic003G203300 Sobic002G173100 Sobic002G173100 Sobic001G060500--Sobic002G173100 Sobic010G110400 Sobic010G110400 Sobic001G060500--Sobic010G110400 Sobic003G125900 Sobic003G125900 Sobic001G060500--Sobic003G125900 Sobic003G108900 Sobic003G108900 Sobic001G060500--Sobic003G108900 Sobic006G232600 Sobic006G232600 Sobic006G233700--Sobic006G232600 Sobic001G500600 Sobic001G500600 Sobic006G233700--Sobic001G500600 Sobic006G233700--Sobic010G110400 Sobic009G170200 Sobic009G170200 Sobic006G233700--Sobic009G170200 Sobic006G233700--Sobic001G060500 Sobic006G233700--Sobic003G203300 Sobic010G171600 Sobic010G171600 Sobic006G233700--Sobic010G171600 Sobic003G070900 Sobic003G070900 Sobic006G233700--Sobic003G070900 Sobic001G219700 Sobic001G219700 Sobic006G233700--Sobic001G219700 Sobic001G540600 Sobic001G540600 Sobic004G179400--Sobic001G540600 Sobic004G179400--Sobic001G060500 Sobic009G207900 Sobic009G207900 Sobic004G179400--Sobic009G207900 Sobic002G028400 Sobic002G028400 Sobic004G179400--Sobic002G028400 Sobic008G074000 Sobic008G074000 Sobic004G179400--Sobic008G074000 Sobic004G179400--Sobic003G125900 Sobic001G378100 Sobic001G378100 Sobic004G179400--Sobic001G378100 Sobic004G179400--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic004G179400--Sobic001G504400 Sobic009G014100 Sobic009G014100 Sobic002G073200--Sobic009G014100 Sobic002G073200--Sobic001G060500 Sobic002G073200--Sobic003G190000 Sobic002G418600 Sobic002G418600 Sobic002G073200--Sobic002G418600 Sobic002G073200--Sobic003G203300 Sobic002G073200--Sobic010G110400 Sobic002G073200--Sobic003G108900 Sobic002G073200--Sobic001G500600 Sobic002G073200--Sobic006G233700 Sobic003G190000--Sobic001G060500 Sobic003G190000--Sobic002G073200 Sobic003G190000--Sobic002G173100 Sobic010G197000 Sobic010G197000 Sobic003G190000--Sobic010G197000 Sobic003G190000--Sobic003G203300 Sobic003G190000--Sobic009G014100 Sobic005G075100 Sobic005G075100 Sobic003G190000--Sobic005G075100 Sobic005G142800 Sobic005G142800 Sobic003G190000--Sobic005G142800 Sobic003G190000--Sobic001G219700 Sobic003G203300--Sobic006G232600 Sobic003G203300--Sobic008G074000 Sobic003G203300--Sobic001G378100 Sobic009G093100 Sobic009G093100 Sobic003G203300--Sobic009G093100 Sobic003G203300--Sobic009G170200 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic003G203300--Sobic006G233700 Sobic004G207400 Sobic004G207400 Sobic003G203300--Sobic004G207400 Sobic003G190100 Sobic003G190100 Sobic002G173100--Sobic003G190100 Sobic002G173100--Sobic003G108900 Sobic002G173100--Sobic003G203300 Sobic002G173100--Sobic001G060500 Sobic002G173100--Sobic003G190000 Sobic002G173100--Sobic005G075100 Sobic004G271600 Sobic004G271600 Sobic002G173100--Sobic004G271600 Sobic005G179300 Sobic005G179300 Sobic002G173100--Sobic005G179300 Sobic004G300000 Sobic004G300000 Sobic002G173100--Sobic004G300000 Sobic010G110400--Sobic006G233700 Sobic010G110400--Sobic003G203300 Sobic010G110400--Sobic009G170200 Sobic002G198300 Sobic002G198300 Sobic010G110400--Sobic002G198300 Sobic010G110400--Sobic001G500600 Sobic004G300100 Sobic004G300100 Sobic010G110400--Sobic004G300100 Sobic010G110400--Sobic003G070900 Sobic006G197300 Sobic006G197300 Sobic010G110400--Sobic006G197300 Sobic010G110400--Sobic001G378100 Sobic002G331800 Sobic002G331800 Sobic003G125900--Sobic002G331800 Sobic003G125900--Sobic004G179400 Sobic003G125900--Sobic003G070900 Sobic003G094350 Sobic003G094350 Sobic003G125900--Sobic003G094350 Sobic003G125900--Sobic001G060500 Sobic001G118400 Sobic001G118400 Sobic003G125900--Sobic001G118400 Sobic004G252500 Sobic004G252500 Sobic003G125900--Sobic004G252500 Sobic003G125900--Sobic002G028400 Sobic003G125900--Sobic001G500600 Sobic004G165900 Sobic004G165900 Sobic003G108900--Sobic004G165900 Sobic003G108900--Sobic004G252500 Sobic003G108900--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic003G108900--Sobic010G231500 Sobic003G108900--Sobic002G173100 Sobic003G108900--Sobic004G300000 Sobic003G108900--Sobic009G014100 Sobic003G108900--Sobic004G271600 Sobic003G108900--Sobic004G207400
Octagon: transcription factors


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