Gene annotation
Transcriptome id Sobic.004G300000.2,Sobic.004G300000.1
Synonym ftsh9, Sb04g033360
Functional annotation OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed
UniProt C5XS32 , A0A1Z5RQS4
Pfam PF07724 PF06480 PF01434
Panther DB PTHR23076 PTHR23076:SF70
NCBI CDD -
KEGG Orthology K03798; ftsH, cell division protease FtsH
Gene Ontology GO:0005524; ATP binding GO:0016021integral component of membrane GO:0008270zinc ion binding GO:0004222metalloendopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G58870 : FTSH protease 9
RAP-DB (Rice) LOC_Os02g43350.1 : OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed
MaizeGDB (Corn) Zm00025a020929 , Zm00025a032169
Brachypodium KQK00553
Barley HORVU6Hr1G061440.9 , HORVU6Hr1G061440.8 , HORVU6Hr1G061440.1 , HORVU6Hr1G061440.3 , HORVU6Hr1G061440.2 , HORVU6Hr1G061440.5 , HORVU6Hr1G061440.4 , HORVU6Hr1G061440.7 , HORVU6Hr1G061440.6 , HORVU6Hr1G061440.11 , HORVU6Hr1G061440.10 , HORVU6Hr1G061440.13 , HORVU6Hr1G061440.12
Wheat TraesCS6D02G222800 , TraesCS6D02G222800 , TraesCS6D02G222800 , TraesCS6B02G284100 , TraesCS6B02G284100 , TraesCS6B02G284100 , TraesCS6A02G240600
Populus PNT56489 , PNT56488 , PNT56487


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cDNA sequences
Sobic.004G300000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
2 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
3 Sobic.006G193200 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
4 Sobic.006G214700 APO, putative, expressed -
5 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
6 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
7 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
8 Sobic.003G014300 expressed protein -
9 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
10 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
11 Sobic.003G359500 expressed protein -
12 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
13 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
14 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
15 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
16 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
17 Sobic.001G118400 expressed protein -
18 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
19 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
20 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -


Gene co-expression network
sample Sobic004G300000 Sobic004G300000 Sobic010G035500 Sobic010G035500 Sobic004G300000--Sobic010G035500 Sobic002G025700 Sobic002G025700 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic006G214700 Sobic006G214700 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic010G035500--Sobic004G300000 Sobic001G029200 Sobic001G029200 Sobic010G035500--Sobic001G029200 Sobic010G035500--Sobic006G214700 Sobic010G035500--Sobic002G025700 Sobic006G201100 Sobic006G201100 Sobic010G035500--Sobic006G201100 Sobic009G141400 Sobic009G141400 Sobic010G035500--Sobic009G141400 Sobic009G019100 Sobic009G019100 Sobic010G035500--Sobic009G019100 Sobic008G081900 Sobic008G081900 Sobic010G035500--Sobic008G081900 Sobic010G035500--Sobic006G193200 Sobic002G025700--Sobic004G300000 Sobic004G089200 Sobic004G089200 Sobic002G025700--Sobic004G089200 Sobic002G025700--Sobic010G035500 Sobic003G359500 Sobic003G359500 Sobic002G025700--Sobic003G359500 Sobic010G207500 Sobic010G207500 Sobic002G025700--Sobic010G207500 Sobic002G025700--Sobic002G354600 Sobic002G025700--Sobic004G165900 Sobic010G205700 Sobic010G205700 Sobic002G025700--Sobic010G205700 Sobic002G025700--Sobic006G193200 Sobic006G193200--Sobic004G300000 Sobic006G193200--Sobic004G165900 Sobic006G193200--Sobic006G214700 Sobic001G118400 Sobic001G118400 Sobic006G193200--Sobic001G118400 Sobic010G076800 Sobic010G076800 Sobic006G193200--Sobic010G076800 Sobic002G331800 Sobic002G331800 Sobic006G193200--Sobic002G331800 Sobic006G140700 Sobic006G140700 Sobic006G193200--Sobic006G140700 Sobic003G328100 Sobic003G328100 Sobic006G193200--Sobic003G328100 Sobic006G193200--Sobic010G035500 Sobic003G179400 Sobic003G179400 Sobic006G214700--Sobic003G179400 Sobic001G450600 Sobic001G450600 Sobic006G214700--Sobic001G450600 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G110900 Sobic006G110900 Sobic006G214700--Sobic006G110900 Sobic004G333400 Sobic004G333400 Sobic006G214700--Sobic004G333400 Sobic003G253300 Sobic003G253300 Sobic006G214700--Sobic003G253300 Sobic008G063200 Sobic008G063200 Sobic006G214700--Sobic008G063200 Sobic006G214700--Sobic010G076800 Sobic003G108900--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic003G108900--Sobic004G252500 Sobic004G300100 Sobic004G300100 Sobic003G108900--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic003G108900--Sobic010G231500 Sobic002G173100 Sobic002G173100 Sobic003G108900--Sobic002G173100 Sobic003G108900--Sobic004G300000 Sobic009G014100 Sobic009G014100 Sobic003G108900--Sobic009G014100 Sobic004G271600 Sobic004G271600 Sobic003G108900--Sobic004G271600 Sobic004G207400 Sobic004G207400 Sobic003G108900--Sobic004G207400 Sobic010G197000--Sobic009G014100 Sobic010G197000--Sobic002G354600 Sobic005G138600 Sobic005G138600 Sobic010G197000--Sobic005G138600 Sobic010G197000--Sobic004G300000 Sobic010G109600 Sobic010G109600 Sobic010G197000--Sobic010G109600 Sobic003G190000 Sobic003G190000 Sobic010G197000--Sobic003G190000 Sobic010G197000--Sobic002G331800 Sobic010G197000--Sobic006G214700 Sobic008G172300 Sobic008G172300 Sobic010G197000--Sobic008G172300 Sobic004G165900--Sobic004G252500 Sobic004G165900--Sobic003G108900 Sobic004G165900--Sobic010G231500 Sobic006G097500 Sobic006G097500 Sobic004G165900--Sobic006G097500 Sobic004G165900--Sobic001G118400 Sobic001G368600 Sobic001G368600 Sobic004G165900--Sobic001G368600 Sobic009G004100 Sobic009G004100 Sobic004G165900--Sobic009G004100 Sobic006G025400 Sobic006G025400 Sobic004G165900--Sobic006G025400 Sobic002G061900 Sobic002G061900 Sobic004G165900--Sobic002G061900 Sobic006G258700 Sobic006G258700 Sobic003G014300--Sobic006G258700 Sobic004G298900 Sobic004G298900 Sobic003G014300--Sobic004G298900 Sobic010G269400 Sobic010G269400 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G037300 Sobic003G037300 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500 Sobic002G354600--Sobic010G197000 Sobic002G354600--Sobic004G300000 Sobic002G354600--Sobic005G138600 Sobic002G354600--Sobic009G014100 Sobic002G354600--Sobic002G025700 Sobic002G354600--Sobic010G035500 Sobic002G354600--Sobic003G108900 Sobic002G354600--Sobic002G331800 Sobic002G354600--Sobic004G298900
Octagon: transcription factors


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