Gene annotation
Transcriptome id Sobic.006G201100.2,Sobic.006G201100.3,Sobic.006G201100.1,Sobic.006G201100.5,Sobic.006G201100.4
Synonym Sb06g027300
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1Z5RES6 , A0A1Z5RER3 , A0A1Z5RET3
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF106
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G62200 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g50930.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a035605 , Zm00025a000541
Brachypodium PNT61755 , PNT61754 , PNT61753 , KQJ88780 , KQJ84352 , KQJ84353 , KQJ84351 , KQJ84356 , KQJ84354 , KQJ84355 , KQJ84347 , KQJ84346
Barley HORVU6Hr1G067980.1 , HORVU1Hr1G039670.4 , HORVU4Hr1G083650.2 , HORVU4Hr1G083650.3 , HORVU4Hr1G083650.1 , HORVU4Hr1G083650.6 , HORVU4Hr1G083650.7 , HORVU4Hr1G083650.4 , HORVU4Hr1G083650.5 , HORVU4Hr1G083650.8 , HORVU2Hr1G098120.1 , HORVU6Hr1G067830.6 , HORVU6Hr1G067830.7 , HORVU6Hr1G067830.4 , HORVU6Hr1G067830.5 , HORVU6Hr1G067830.2 , HORVU6Hr1G067830.3 , HORVU6Hr1G067830.1 , HORVU3Hr1G088850.10 , HORVU3Hr1G088850.11 , HORVU3Hr1G088850.12 , HORVU3Hr1G088850.13 , HORVU1Hr1G039670.8 , HORVU1Hr1G039670.9 , HORVU1Hr1G039670.1 , HORVU1Hr1G039670.2 , HORVU1Hr1G039670.3 , HORVU1Hr1G039670.5 , HORVU1Hr1G039670.6 , HORVU1Hr1G039670.7 , HORVU3Hr1G088850.6 , HORVU3Hr1G088850.3 , HORVU6Hr1G008680.1
Wheat TraesCS2A02G443700 , TraesCS3B02G424800 , TraesCS2A02G443600 , TraesCS5B02G245300 , TraesCS2B02G464700 , TraesCS4D02G335100 , TraesCS3D02G385700 , TraesCS4B02G338600 , TraesCS2B02G464900
Populus -


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cDNA sequences
Sobic.006G201100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
2 Sobic.006G214700 APO, putative, expressed -
3 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
4 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
5 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
6 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
7 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
8 Sobic.004G164200 heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
9 Sobic.009G141400 transcriptional regulator, putative, expressed -
10 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
11 Sobic.004G224500 OsClp3 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
12 Sobic.005G028900 cytochrome c-type biogenesis protein dbsD-like, putative, expressed -
13 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
14 Sobic.006G193200 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
15 Sobic.003G359500 expressed protein -
16 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
17 Sobic.002G163700 expressed protein -
18 Sobic.006G140700 "aldo/keto reductase (AKR) family protein, up-regulated under drought stress , maped into a unique stay green QTL(QSTG3_6)"(PubMedID : 24655390)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I


Gene co-expression network
sample Sobic006G201100 Sobic006G201100 Sobic010G035500 Sobic010G035500 Sobic006G201100--Sobic010G035500 Sobic006G214700 Sobic006G214700 Sobic006G201100--Sobic006G214700 Sobic002G046900 Sobic002G046900 Sobic006G201100--Sobic002G046900 Sobic010G207500 Sobic010G207500 Sobic006G201100--Sobic010G207500 Sobic004G300000 Sobic004G300000 Sobic006G201100--Sobic004G300000 Sobic006G110900 Sobic006G110900 Sobic006G201100--Sobic006G110900 Sobic003G306700 Sobic003G306700 Sobic006G201100--Sobic003G306700 Sobic004G164200 Sobic004G164200 Sobic006G201100--Sobic004G164200 Sobic009G141400 Sobic009G141400 Sobic006G201100--Sobic009G141400 Sobic010G035500--Sobic004G300000 Sobic001G029200 Sobic001G029200 Sobic010G035500--Sobic001G029200 Sobic010G035500--Sobic006G214700 Sobic002G025700 Sobic002G025700 Sobic010G035500--Sobic002G025700 Sobic010G035500--Sobic006G201100 Sobic010G035500--Sobic009G141400 Sobic009G019100 Sobic009G019100 Sobic010G035500--Sobic009G019100 Sobic008G081900 Sobic008G081900 Sobic010G035500--Sobic008G081900 Sobic006G193200 Sobic006G193200 Sobic010G035500--Sobic006G193200 Sobic003G179400 Sobic003G179400 Sobic006G214700--Sobic003G179400 Sobic001G450600 Sobic001G450600 Sobic006G214700--Sobic001G450600 Sobic002G331800 Sobic002G331800 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G214700--Sobic006G110900 Sobic004G333400 Sobic004G333400 Sobic006G214700--Sobic004G333400 Sobic003G253300 Sobic003G253300 Sobic006G214700--Sobic003G253300 Sobic008G063200 Sobic008G063200 Sobic006G214700--Sobic008G063200 Sobic010G076800 Sobic010G076800 Sobic006G214700--Sobic010G076800 Sobic002G046900--Sobic006G201100 Sobic005G175600 Sobic005G175600 Sobic002G046900--Sobic005G175600 Sobic002G046900--Sobic010G035500 Sobic002G046900--Sobic006G110900 Sobic004G224500 Sobic004G224500 Sobic002G046900--Sobic004G224500 Sobic006G123500 Sobic006G123500 Sobic002G046900--Sobic006G123500 Sobic002G046900--Sobic010G207500 Sobic001G404500 Sobic001G404500 Sobic002G046900--Sobic001G404500 Sobic005G203300 Sobic005G203300 Sobic002G046900--Sobic005G203300 Sobic010G207500--Sobic002G025700 Sobic010G207500--Sobic006G201100 Sobic010G207500--Sobic004G300000 Sobic002G362100 Sobic002G362100 Sobic010G207500--Sobic002G362100 Sobic010G207500--Sobic002G046900 Sobic010G207500--Sobic010G035500 Sobic010G207500--Sobic004G164200 Sobic010G207500--Sobic009G141400 Sobic001G351400 Sobic001G351400 Sobic010G207500--Sobic001G351400 Sobic004G300000--Sobic010G035500 Sobic004G300000--Sobic002G025700 Sobic004G300000--Sobic006G193200 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic006G110900--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G110900--Sobic001G286600 Sobic006G155500 Sobic006G155500 Sobic006G110900--Sobic006G155500 Sobic006G110900--Sobic006G214700 Sobic006G110900--Sobic008G063200 Sobic001G118400 Sobic001G118400 Sobic006G110900--Sobic001G118400 Sobic006G110900--Sobic004G224500 Sobic003G328100 Sobic003G328100 Sobic006G110900--Sobic003G328100 Sobic006G050400 Sobic006G050400 Sobic006G110900--Sobic006G050400 Sobic003G306700--Sobic004G300000 Sobic003G306700--Sobic006G201100 Sobic003G306700--Sobic010G035500 Sobic003G306700--Sobic006G214700 Sobic009G079950 Sobic009G079950 Sobic003G306700--Sobic009G079950 Sobic003G306700--Sobic002G025700 Sobic003G306700--Sobic002G331800 Sobic003G306700--Sobic006G110900 Sobic003G306700--Sobic004G164200 Sobic004G164200--Sobic006G201100 Sobic004G164200--Sobic002G046900 Sobic004G164200--Sobic010G207500 Sobic004G164200--Sobic003G306700 Sobic004G164200--Sobic002G025700 Sobic004G164200--Sobic005G175600 Sobic004G164200--Sobic002G362100 Sobic003G208300 Sobic003G208300 Sobic004G164200--Sobic003G208300 Sobic004G164200--Sobic006G123500 Sobic009G141400--Sobic006G214700 Sobic009G141400--Sobic006G110900 Sobic009G141400--Sobic006G155500 Sobic009G141400--Sobic010G035500 Sobic010G269400 Sobic010G269400 Sobic009G141400--Sobic010G269400 Sobic004G324100 Sobic004G324100 Sobic009G141400--Sobic004G324100 Sobic009G141400--Sobic008G063200 Sobic009G141400--Sobic003G253300 Sobic009G141400--Sobic001G286600
Octagon: transcription factors


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