Gene annotation
Transcriptome id Sobic.009G213800.1
Synonym Sb09g026930
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
DUF1230 domain containing protein, expressed
UniProt C5YUK1
Pfam PF06799
Panther DB PTHR34214 PTHR34214:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11840 : Protein of unknown function (DUF1230)
RAP-DB (Rice) LOC_Os05g46250.1 : DUF1230 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036462
Brachypodium KQK05145 , KQK05144
Barley HORVU1Hr1G003850.1 , HORVU6Hr1G053420.1 , HORVU1Hr1G079860.5 , HORVU5Hr1G066650.1 , HORVU6Hr1G010390.1 , HORVU6Hr1G010390.3 , HORVU6Hr1G010390.2 , HORVU1Hr1G079860.4 , HORVU3Hr1G055470.1 , HORVU1Hr1G079860.1 , HORVU1Hr1G079860.3 , HORVU1Hr1G079860.2 , HORVU4Hr1G036060.1 , HORVU4Hr1G036060.3 , HORVU4Hr1G036060.2
Wheat TraesCS1B02G377600 , TraesCS1A02G361000 , TraesCS1D02G365400
Populus -


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cDNA sequences
Sobic.009G213800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
2 Sobic.001G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
3 Sobic.006G060601 - -
4 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
5 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
6 Sobic.003G359500 expressed protein -
7 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
8 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
9 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
10 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
12 Sobic.006G024500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
13 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
14 Sobic.001G252000 uridylyltransferase-related, putative, expressed -
15 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
16 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
17 Sobic.004G142800 similar to Cysteine proteinase 1 precursor(PubMedID : 29862293)@"As a homologous gene of the drought stress-responsive gene RD19 of Arabidopsis, SbRD19 overexpression in Arabidopsis improved the drought tolerance of plants relative to wild-type plants."(PubMedID : 32112957)@cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
18 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
19 Sobic.006G214700 APO, putative, expressed -
20 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V


Gene co-expression network
sample Sobic009G213800 Sobic009G213800 Sobic009G019100 Sobic009G019100 Sobic009G213800--Sobic009G019100 Sobic001G275500 Sobic001G275500 Sobic009G213800--Sobic001G275500 Sobic006G060601 Sobic006G060601 Sobic009G213800--Sobic006G060601 Sobic001G029200 Sobic001G029200 Sobic009G213800--Sobic001G029200 Sobic010G035500 Sobic010G035500 Sobic009G213800--Sobic010G035500 Sobic003G359500 Sobic003G359500 Sobic009G213800--Sobic003G359500 Sobic006G201100 Sobic006G201100 Sobic009G213800--Sobic006G201100 Sobic002G046900 Sobic002G046900 Sobic009G213800--Sobic002G046900 Sobic004G300000 Sobic004G300000 Sobic009G213800--Sobic004G300000 Sobic009G019100--Sobic009G213800 Sobic009G019100--Sobic010G035500 Sobic009G019100--Sobic001G029200 Sobic009G019100--Sobic002G046900 Sobic009G019100--Sobic004G300000 Sobic005G175500 Sobic005G175500 Sobic009G019100--Sobic005G175500 Sobic008G081900 Sobic008G081900 Sobic009G019100--Sobic008G081900 Sobic009G019100--Sobic003G359500 Sobic003G306700 Sobic003G306700 Sobic009G019100--Sobic003G306700 Sobic001G275500--Sobic009G213800 Sobic001G275500--Sobic006G060601 Sobic001G275500--Sobic009G019100 Sobic001G275500--Sobic003G359500 Sobic002G217200 Sobic002G217200 Sobic001G275500--Sobic002G217200 Sobic002G072100 Sobic002G072100 Sobic001G275500--Sobic002G072100 Sobic006G030600 Sobic006G030600 Sobic001G275500--Sobic006G030600 Sobic001G275500--Sobic001G029200 Sobic007G084300 Sobic007G084300 Sobic001G275500--Sobic007G084300 Sobic006G060601--Sobic009G213800 Sobic010G077400 Sobic010G077400 Sobic006G060601--Sobic010G077400 Sobic006G060601--Sobic001G275500 Sobic006G060601--Sobic005G175500 Sobic003G422800 Sobic003G422800 Sobic006G060601--Sobic003G422800 Sobic010G207500 Sobic010G207500 Sobic006G060601--Sobic010G207500 Sobic006G060601--Sobic003G359500 Sobic006G060601--Sobic009G019100 Sobic002G025700 Sobic002G025700 Sobic006G060601--Sobic002G025700 Sobic001G029200--Sobic010G035500 Sobic001G029200--Sobic004G300000 Sobic001G029200--Sobic009G019100 Sobic001G029200--Sobic008G081900 Sobic001G029200--Sobic009G213800 Sobic007G227700 Sobic007G227700 Sobic001G029200--Sobic007G227700 Sobic002G193100 Sobic002G193100 Sobic001G029200--Sobic002G193100 Sobic004G026500 Sobic004G026500 Sobic001G029200--Sobic004G026500 Sobic002G339300 Sobic002G339300 Sobic001G029200--Sobic002G339300 Sobic010G035500--Sobic004G300000 Sobic010G035500--Sobic001G029200 Sobic006G214700 Sobic006G214700 Sobic010G035500--Sobic006G214700 Sobic010G035500--Sobic002G025700 Sobic010G035500--Sobic006G201100 Sobic009G141400 Sobic009G141400 Sobic010G035500--Sobic009G141400 Sobic010G035500--Sobic009G019100 Sobic010G035500--Sobic008G081900 Sobic006G193200 Sobic006G193200 Sobic010G035500--Sobic006G193200 Sobic003G359500--Sobic004G300000 Sobic003G359500--Sobic002G025700 Sobic003G359500--Sobic010G035500 Sobic003G359500--Sobic009G213800 Sobic003G359500--Sobic006G214700 Sobic003G359500--Sobic006G201100 Sobic003G359500--Sobic009G019100 Sobic010G197000 Sobic010G197000 Sobic003G359500--Sobic010G197000 Sobic003G359500--Sobic006G060601 Sobic006G201100--Sobic010G035500 Sobic006G201100--Sobic006G214700 Sobic006G201100--Sobic002G046900 Sobic006G201100--Sobic010G207500 Sobic006G201100--Sobic004G300000 Sobic006G110900 Sobic006G110900 Sobic006G201100--Sobic006G110900 Sobic006G201100--Sobic003G306700 Sobic004G164200 Sobic004G164200 Sobic006G201100--Sobic004G164200 Sobic006G201100--Sobic009G141400 Sobic002G046900--Sobic006G201100 Sobic005G175600 Sobic005G175600 Sobic002G046900--Sobic005G175600 Sobic002G046900--Sobic010G035500 Sobic002G046900--Sobic006G110900 Sobic004G224500 Sobic004G224500 Sobic002G046900--Sobic004G224500 Sobic006G123500 Sobic006G123500 Sobic002G046900--Sobic006G123500 Sobic002G046900--Sobic010G207500 Sobic001G404500 Sobic001G404500 Sobic002G046900--Sobic001G404500 Sobic005G203300 Sobic005G203300 Sobic002G046900--Sobic005G203300 Sobic004G300000--Sobic010G035500 Sobic004G300000--Sobic002G025700 Sobic004G300000--Sobic006G193200 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600
Octagon: transcription factors


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