Gene annotation
Transcriptome id Sobic.001G252000.1
Synonym Sb01g022260
Functional annotation uridylyltransferase-related, putative, expressed
UniProt C5WM67
Pfam -
Panther DB PTHR31096 PTHR31096:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16880 : uridylyltransferase-related
RAP-DB (Rice) LOC_Os08g14440.2 : uridylyltransferase-related, putative, expressed
MaizeGDB (Corn) Zm00025a017806
Brachypodium KQJ95750 , KQJ95751 , PNT66958 , KQJ95749 , KQJ95748 , KQJ95747 , KQJ95745
Barley HORVU0Hr1G021140.1 , HORVU7Hr1G069710.15 , HORVU7Hr1G069710.18 , HORVU7Hr1G069710.19 , HORVU7Hr1G069710.8 , HORVU7Hr1G069710.9 , HORVU7Hr1G069710.4 , HORVU7Hr1G069710.6 , HORVU7Hr1G069710.7 , HORVU7Hr1G069710.13 , HORVU7Hr1G069710.10 , HORVU7Hr1G069710.16 , HORVU7Hr1G069710.17
Wheat TraesCS7A02G294200 , TraesCS7A02G294200 , TraesCS7D02G289900 , TraesCS7B02G186500 , TraesCS7B02G186500 , TraesCS7B02G186500 , TraesCS7D02G289900
Populus -


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cDNA sequences
Sobic.001G252000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
3 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
4 Sobic.009G011600 expressed protein -
5 Sobic.003G174301 - -
6 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
7 Sobic.007G084300 kelch repeat protein, putative, expressed -
8 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
9 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
10 Sobic.001G223550 - -
11 Sobic.010G043100 serine esterase family protein, putative, expressed -
12 Sobic.002G193100 expressed protein -
13 Sobic.007G169300 expressed protein -
14 Sobic.004G070500 expressed protein -
15 Sobic.001G512500 expressed protein -
16 Sobic.004G092900 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
17 Sobic.006G145901 - K05350: beta-glucosidase
18 Sobic.001G351800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@integral membrane protein, putative, expressed -
19 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
20 Sobic.002G424700 ATPOT1, putative, expressed -


Gene co-expression network
sample Sobic001G252000 Sobic001G252000 Sobic004G034600 Sobic004G034600 Sobic001G252000--Sobic004G034600 Sobic002G249300 Sobic002G249300 Sobic001G252000--Sobic002G249300 Sobic009G019100 Sobic009G019100 Sobic001G252000--Sobic009G019100 Sobic009G011600 Sobic009G011600 Sobic001G252000--Sobic009G011600 Sobic003G174301 Sobic003G174301 Sobic001G252000--Sobic003G174301 Sobic008G081900 Sobic008G081900 Sobic001G252000--Sobic008G081900 Sobic007G084300 Sobic007G084300 Sobic001G252000--Sobic007G084300 Sobic009G213800 Sobic009G213800 Sobic001G252000--Sobic009G213800 Sobic004G131040 Sobic004G131040 Sobic001G252000--Sobic004G131040 Sobic005G149700 Sobic005G149700 Sobic004G034600--Sobic005G149700 Sobic004G034600--Sobic002G249300 Sobic001G517800 Sobic001G517800 Sobic004G034600--Sobic001G517800 Sobic004G034600--Sobic009G011600 Sobic002G266000 Sobic002G266000 Sobic004G034600--Sobic002G266000 Sobic001G459600 Sobic001G459600 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic001G223550 Sobic001G223550 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic002G249300--Sobic004G034600 Sobic002G249300--Sobic003G174301 Sobic002G249300--Sobic001G223550 Sobic002G249300--Sobic005G149700 Sobic002G249300--Sobic009G011600 Sobic001G233300 Sobic001G233300 Sobic002G249300--Sobic001G233300 Sobic002G249300--Sobic001G252000 Sobic001G496100 Sobic001G496100 Sobic002G249300--Sobic001G496100 Sobic007G010700 Sobic007G010700 Sobic002G249300--Sobic007G010700 Sobic009G019100--Sobic009G213800 Sobic010G035500 Sobic010G035500 Sobic009G019100--Sobic010G035500 Sobic001G029200 Sobic001G029200 Sobic009G019100--Sobic001G029200 Sobic002G046900 Sobic002G046900 Sobic009G019100--Sobic002G046900 Sobic004G300000 Sobic004G300000 Sobic009G019100--Sobic004G300000 Sobic005G175500 Sobic005G175500 Sobic009G019100--Sobic005G175500 Sobic009G019100--Sobic008G081900 Sobic003G359500 Sobic003G359500 Sobic009G019100--Sobic003G359500 Sobic003G306700 Sobic003G306700 Sobic009G019100--Sobic003G306700 Sobic009G011600--Sobic004G034600 Sobic009G011600--Sobic001G517800 Sobic009G011600--Sobic001G496100 Sobic009G011600--Sobic005G149700 Sobic010G020800 Sobic010G020800 Sobic009G011600--Sobic010G020800 Sobic007G169300 Sobic007G169300 Sobic009G011600--Sobic007G169300 Sobic009G011600--Sobic002G249300 Sobic005G149200 Sobic005G149200 Sobic009G011600--Sobic005G149200 Sobic010G043100 Sobic010G043100 Sobic009G011600--Sobic010G043100 Sobic003G174301--Sobic002G249300 Sobic003G174301--Sobic004G034600 Sobic003G174301--Sobic005G149700 Sobic005G053200 Sobic005G053200 Sobic003G174301--Sobic005G053200 Sobic003G174301--Sobic009G011600 Sobic001G053200 Sobic001G053200 Sobic003G174301--Sobic001G053200 Sobic004G070500 Sobic004G070500 Sobic003G174301--Sobic004G070500 Sobic003G174301--Sobic001G252000 Sobic001G176501 Sobic001G176501 Sobic003G174301--Sobic001G176501 Sobic002G129400 Sobic002G129400 Sobic008G081900--Sobic002G129400 Sobic001G219700 Sobic001G219700 Sobic008G081900--Sobic001G219700 Sobic004G307100 Sobic004G307100 Sobic008G081900--Sobic004G307100 Sobic008G081900--Sobic010G035500 Sobic007G166200 Sobic007G166200 Sobic008G081900--Sobic007G166200 Sobic008G081900--Sobic007G169300 Sobic008G081900--Sobic004G300000 Sobic004G026500 Sobic004G026500 Sobic008G081900--Sobic004G026500 Sobic006G030400 Sobic006G030400 Sobic008G081900--Sobic006G030400 Sobic006G030600 Sobic006G030600 Sobic007G084300--Sobic006G030600 Sobic006G143000 Sobic006G143000 Sobic007G084300--Sobic006G143000 Sobic010G196500 Sobic010G196500 Sobic007G084300--Sobic010G196500 Sobic007G084300--Sobic004G034600 Sobic002G373100 Sobic002G373100 Sobic007G084300--Sobic002G373100 Sobic003G086900 Sobic003G086900 Sobic007G084300--Sobic003G086900 Sobic009G016600 Sobic009G016600 Sobic007G084300--Sobic009G016600 Sobic007G084300--Sobic002G249300 Sobic002G193100 Sobic002G193100 Sobic007G084300--Sobic002G193100 Sobic009G213800--Sobic009G019100 Sobic001G275500 Sobic001G275500 Sobic009G213800--Sobic001G275500 Sobic006G060601 Sobic006G060601 Sobic009G213800--Sobic006G060601 Sobic009G213800--Sobic001G029200 Sobic009G213800--Sobic010G035500 Sobic009G213800--Sobic003G359500 Sobic006G201100 Sobic006G201100 Sobic009G213800--Sobic006G201100 Sobic009G213800--Sobic002G046900 Sobic009G213800--Sobic004G300000 Sobic010G000600 Sobic010G000600 Sobic004G131040--Sobic010G000600 Sobic004G265800 Sobic004G265800 Sobic004G131040--Sobic004G265800 Sobic002G181300 Sobic002G181300 Sobic004G131040--Sobic002G181300 Sobic001G146800 Sobic001G146800 Sobic004G131040--Sobic001G146800 Sobic002G315800 Sobic002G315800 Sobic004G131040--Sobic002G315800 Sobic004G131040--Sobic006G030600 Sobic007G004500 Sobic007G004500 Sobic004G131040--Sobic007G004500 Sobic004G131040--Sobic002G193100 Sobic003G110000 Sobic003G110000 Sobic004G131040--Sobic003G110000
Octagon: transcription factors


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