Gene annotation
Transcriptome id Sobic.001G223550.1
Synonym -
Functional annotation -
UniProt A0A1Z5S7F2
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27004 PTHR27004:SF8
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G20140 : Leucine-rich repeat transmembrane protein kinase
RAP-DB (Rice) LOC_Os10g33130.1 : leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006661 , Zm00025a017661 , Zm00025a017657
Brachypodium KQJ97029 , KQK21062 , PNT63771
Barley HORVU1Hr1G039600.1 , HORVU1Hr1G039600.3 , HORVU1Hr1G039600.2 , HORVU1Hr1G039370.1 , HORVU1Hr1G039370.3 , HORVU1Hr1G039370.2 , HORVU1Hr1G039370.5 , HORVU1Hr1G039370.4 , HORVU4Hr1G088600.8 , HORVU4Hr1G088600.4 , HORVU4Hr1G088600.5 , HORVU4Hr1G088600.6 , HORVU4Hr1G088600.7 , HORVU4Hr1G088600.1 , HORVU4Hr1G088600.2 , HORVU4Hr1G088600.3 , HORVU1Hr1G039600.4
Wheat TraesCS1D02G146900 , TraesCS1A02G149700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G145500 expressed protein -
2 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
4 Sobic.005G133600 - -
5 Sobic.008G101100 powdery mildew resistance protein PM3A, putative, expressed -
6 Sobic.005G089400 - -
7 Sobic.001G233300 - -
8 Sobic.008G081800 expressed protein -
9 Sobic.001G459600 expressed protein -
10 Sobic.010G272800 OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed K03798: ftsH, cell division protease FtsH
11 Sobic.001G517800 NIN, putative, expressed -
12 Sobic.001G053200 expressed protein -
13 Sobic.001G413000 ABC transporter family protein, putative, expressed -
14 Sobic.010G043100 serine esterase family protein, putative, expressed -
15 Sobic.007G084300 kelch repeat protein, putative, expressed -
16 Sobic.003G416000 - -
17 Sobic.009G011600 expressed protein -
18 Sobic.008G166550 - -
19 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
20 Sobic.002G124600 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10


Gene co-expression network
sample Sobic001G223550 Sobic001G223550 Sobic010G145500 Sobic010G145500 Sobic001G223550--Sobic010G145500 Sobic004G034600 Sobic004G034600 Sobic001G223550--Sobic004G034600 Sobic002G249300 Sobic002G249300 Sobic001G223550--Sobic002G249300 Sobic005G133600 Sobic005G133600 Sobic001G223550--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic001G223550--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic001G223550--Sobic005G089400 Sobic001G233300 Sobic001G233300 Sobic001G223550--Sobic001G233300 Sobic008G081800 Sobic008G081800 Sobic001G223550--Sobic008G081800 Sobic001G459600 Sobic001G459600 Sobic001G223550--Sobic001G459600 Sobic010G145500--Sobic001G223550 Sobic010G145500--Sobic001G233300 Sobic010G145500--Sobic005G089400 Sobic010G271901 Sobic010G271901 Sobic010G145500--Sobic010G271901 Sobic010G145500--Sobic008G101100 Sobic010G121200 Sobic010G121200 Sobic010G145500--Sobic010G121200 Sobic010G145500--Sobic001G459600 Sobic003G160100 Sobic003G160100 Sobic010G145500--Sobic003G160100 Sobic001G517800 Sobic001G517800 Sobic010G145500--Sobic001G517800 Sobic005G149700 Sobic005G149700 Sobic004G034600--Sobic005G149700 Sobic004G034600--Sobic002G249300 Sobic004G034600--Sobic001G517800 Sobic009G011600 Sobic009G011600 Sobic004G034600--Sobic009G011600 Sobic002G266000 Sobic002G266000 Sobic004G034600--Sobic002G266000 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic002G249300--Sobic004G034600 Sobic003G174301 Sobic003G174301 Sobic002G249300--Sobic003G174301 Sobic002G249300--Sobic001G223550 Sobic002G249300--Sobic005G149700 Sobic002G249300--Sobic009G011600 Sobic002G249300--Sobic001G233300 Sobic001G252000 Sobic001G252000 Sobic002G249300--Sobic001G252000 Sobic001G496100 Sobic001G496100 Sobic002G249300--Sobic001G496100 Sobic007G010700 Sobic007G010700 Sobic002G249300--Sobic007G010700 Sobic005G133600--Sobic001G223550 Sobic009G248801 Sobic009G248801 Sobic005G133600--Sobic009G248801 Sobic005G133600--Sobic008G101100 Sobic004G253700 Sobic004G253700 Sobic005G133600--Sobic004G253700 Sobic005G133600--Sobic003G160100 Sobic007G185300 Sobic007G185300 Sobic005G133600--Sobic007G185300 Sobic007G090403 Sobic007G090403 Sobic005G133600--Sobic007G090403 Sobic005G133600--Sobic007G010700 Sobic005G095000 Sobic005G095000 Sobic005G133600--Sobic005G095000 Sobic003G416000 Sobic003G416000 Sobic008G101100--Sobic003G416000 Sobic008G101100--Sobic004G253700 Sobic008G166550 Sobic008G166550 Sobic008G101100--Sobic008G166550 Sobic008G101100--Sobic001G223550 Sobic007G202300 Sobic007G202300 Sobic008G101100--Sobic007G202300 Sobic008G101100--Sobic009G248801 Sobic008G101100--Sobic005G133600 Sobic008G101100--Sobic005G089400 Sobic002G017500 Sobic002G017500 Sobic008G101100--Sobic002G017500 Sobic001G000501 Sobic001G000501 Sobic005G089400--Sobic001G000501 Sobic005G089400--Sobic004G253700 Sobic005G089400--Sobic001G223550 Sobic005G089400--Sobic008G101100 Sobic005G089400--Sobic003G416000 Sobic005G089400--Sobic007G010700 Sobic005G089400--Sobic001G459600 Sobic005G089400--Sobic010G145500 Sobic008G122100 Sobic008G122100 Sobic005G089400--Sobic008G122100 Sobic002G153200 Sobic002G153200 Sobic001G233300--Sobic002G153200 Sobic002G143766 Sobic002G143766 Sobic001G233300--Sobic002G143766 Sobic001G233300--Sobic001G223550 Sobic001G233300--Sobic002G249300 Sobic001G542150 Sobic001G542150 Sobic001G233300--Sobic001G542150 Sobic001G233300--Sobic010G145500 Sobic001G233300--Sobic004G034600 Sobic001G233300--Sobic005G149700 Sobic001G233300--Sobic001G000501 Sobic008G081800--Sobic008G101100 Sobic008G081800--Sobic001G223550 Sobic008G081800--Sobic003G416000 Sobic008G081800--Sobic008G166550 Sobic008G081800--Sobic001G459600 Sobic003G127001 Sobic003G127001 Sobic008G081800--Sobic003G127001 Sobic008G081800--Sobic007G202300 Sobic002G115050 Sobic002G115050 Sobic008G081800--Sobic002G115050 Sobic008G081800--Sobic004G034600 Sobic001G459600--Sobic001G517800 Sobic001G459600--Sobic001G000501 Sobic001G459600--Sobic004G034600 Sobic001G000700 Sobic001G000700 Sobic001G459600--Sobic001G000700 Sobic002G418800 Sobic002G418800 Sobic001G459600--Sobic002G418800 Sobic008G084300 Sobic008G084300 Sobic001G459600--Sobic008G084300 Sobic001G459600--Sobic008G166550 Sobic001G459600--Sobic001G223550 Sobic001G459600--Sobic005G133600
Octagon: transcription factors


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