Gene annotation
Transcriptome id Sobic.010G272800.1,Sobic.010G272800.2
Synonym FTSH1, Sb10g030720
Functional annotation OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed
UniProt A0A1W0VV84 , A0A1W0VV71
Pfam PF07728 PF01434
Panther DB PTHR23076 PTHR23076:SF33
NCBI CDD -
KEGG Orthology K03798; ftsH, cell division protease FtsH
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0006508proteolysis GO:0004222metalloendopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G42270 : FtsH extracellular protease family
RAP-DB (Rice) LOC_Os06g51029.1 : OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed
MaizeGDB (Corn) Zm00025a041703
Brachypodium KQK16675
Barley -
Wheat TraesCS7D02G534500 , TraesCS7A02G547500 , TraesCS7B02G471600
Populus -


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cDNA sequences
Sobic.010G272800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
2 Sobic.003G301500 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K17623: PUDP, pseudouridine 5'-phosphatase
3 Sobic.002G129400 ABC transporter, ATP-binding protein, putative, expressed -
4 Sobic.010G043100 serine esterase family protein, putative, expressed -
5 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
6 Sobic.001G223550 - -
7 Sobic.009G241200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.009G011600 expressed protein -
9 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
10 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
12 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -
13 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
14 Sobic.001G517800 NIN, putative, expressed -
15 Sobic.002G431500 - -
16 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
17 Sobic.002G349100 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
18 Sobic.009G080400 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
19 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -


Gene co-expression network
sample Sobic010G272800 Sobic010G272800 Sobic010G223200 Sobic010G223200 Sobic010G272800--Sobic010G223200 Sobic003G301500 Sobic003G301500 Sobic010G272800--Sobic003G301500 Sobic002G129400 Sobic002G129400 Sobic010G272800--Sobic002G129400 Sobic010G043100 Sobic010G043100 Sobic010G272800--Sobic010G043100 Sobic001G062300 Sobic001G062300 Sobic010G272800--Sobic001G062300 Sobic001G223550 Sobic001G223550 Sobic010G272800--Sobic001G223550 Sobic009G241200 Sobic009G241200 Sobic010G272800--Sobic009G241200 Sobic009G011600 Sobic009G011600 Sobic010G272800--Sobic009G011600 Sobic010G020800 Sobic010G020800 Sobic010G272800--Sobic010G020800 Sobic002G060800 Sobic002G060800 Sobic010G223200--Sobic002G060800 Sobic002G291800 Sobic002G291800 Sobic010G223200--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic010G223200--Sobic007G006200 Sobic002G351200 Sobic002G351200 Sobic010G223200--Sobic002G351200 Sobic004G271600 Sobic004G271600 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic002G275100 Sobic002G275100 Sobic010G223200--Sobic002G275100 Sobic010G207100 Sobic010G207100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic004G189200 Sobic004G189200 Sobic003G301500--Sobic004G189200 Sobic008G167600 Sobic008G167600 Sobic003G301500--Sobic008G167600 Sobic002G431500 Sobic002G431500 Sobic003G301500--Sobic002G431500 Sobic003G301500--Sobic001G062300 Sobic003G301500--Sobic010G272800 Sobic003G301500--Sobic010G223200 Sobic003G301500--Sobic010G020800 Sobic003G301500--Sobic002G291800 Sobic003G301500--Sobic007G006200 Sobic007G166200 Sobic007G166200 Sobic002G129400--Sobic007G166200 Sobic008G081900 Sobic008G081900 Sobic002G129400--Sobic008G081900 Sobic002G072400 Sobic002G072400 Sobic002G129400--Sobic002G072400 Sobic002G349100 Sobic002G349100 Sobic002G129400--Sobic002G349100 Sobic002G081400 Sobic002G081400 Sobic002G129400--Sobic002G081400 Sobic009G093100 Sobic009G093100 Sobic002G129400--Sobic009G093100 Sobic003G203300 Sobic003G203300 Sobic002G129400--Sobic003G203300 Sobic006G065100 Sobic006G065100 Sobic002G129400--Sobic006G065100 Sobic001G219700 Sobic001G219700 Sobic002G129400--Sobic001G219700 Sobic010G043100--Sobic009G011600 Sobic010G043100--Sobic008G081900 Sobic010G043100--Sobic010G272800 Sobic010G043100--Sobic002G129400 Sobic010G043100--Sobic001G223550 Sobic004G034600 Sobic004G034600 Sobic010G043100--Sobic004G034600 Sobic010G043100--Sobic010G020800 Sobic001G517800 Sobic001G517800 Sobic010G043100--Sobic001G517800 Sobic007G169300 Sobic007G169300 Sobic010G043100--Sobic007G169300 Sobic006G257800 Sobic006G257800 Sobic001G062300--Sobic006G257800 Sobic001G062300--Sobic004G189200 Sobic006G275100 Sobic006G275100 Sobic001G062300--Sobic006G275100 Sobic001G062300--Sobic008G167600 Sobic007G190000 Sobic007G190000 Sobic001G062300--Sobic007G190000 Sobic004G211866 Sobic004G211866 Sobic001G062300--Sobic004G211866 Sobic001G062300--Sobic003G301500 Sobic001G062300--Sobic010G272800 Sobic002G383600 Sobic002G383600 Sobic001G062300--Sobic002G383600 Sobic010G145500 Sobic010G145500 Sobic001G223550--Sobic010G145500 Sobic001G223550--Sobic004G034600 Sobic002G249300 Sobic002G249300 Sobic001G223550--Sobic002G249300 Sobic005G133600 Sobic005G133600 Sobic001G223550--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic001G223550--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic001G223550--Sobic005G089400 Sobic001G233300 Sobic001G233300 Sobic001G223550--Sobic001G233300 Sobic008G081800 Sobic008G081800 Sobic001G223550--Sobic008G081800 Sobic001G459600 Sobic001G459600 Sobic001G223550--Sobic001G459600 Sobic009G241200--Sobic001G219700 Sobic009G241200--Sobic002G129400 Sobic001G396000 Sobic001G396000 Sobic009G241200--Sobic001G396000 Sobic009G241200--Sobic002G349100 Sobic009G241200--Sobic010G272800 Sobic009G241200--Sobic007G166200 Sobic002G243800 Sobic002G243800 Sobic009G241200--Sobic002G243800 Sobic009G241200--Sobic008G081900 Sobic002G146300 Sobic002G146300 Sobic009G241200--Sobic002G146300 Sobic009G011600--Sobic004G034600 Sobic009G011600--Sobic001G517800 Sobic001G496100 Sobic001G496100 Sobic009G011600--Sobic001G496100 Sobic005G149700 Sobic005G149700 Sobic009G011600--Sobic005G149700 Sobic009G011600--Sobic010G020800 Sobic009G011600--Sobic007G169300 Sobic009G011600--Sobic002G249300 Sobic005G149200 Sobic005G149200 Sobic009G011600--Sobic005G149200 Sobic009G011600--Sobic010G043100 Sobic003G190400 Sobic003G190400 Sobic010G020800--Sobic003G190400 Sobic010G020800--Sobic001G517800 Sobic004G001500 Sobic004G001500 Sobic010G020800--Sobic004G001500 Sobic010G020800--Sobic007G190000 Sobic010G020800--Sobic002G146300 Sobic003G301900 Sobic003G301900 Sobic010G020800--Sobic003G301900 Sobic010G020800--Sobic009G011600 Sobic001G446850 Sobic001G446850 Sobic010G020800--Sobic001G446850 Sobic006G240400 Sobic006G240400 Sobic010G020800--Sobic006G240400
Octagon: transcription factors


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