Gene annotation
Transcriptome id Sobic.002G072100.1
Synonym Sb02g006070
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XCP1
Pfam -
Panther DB PTHR33646 PTHR33646:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18130 : -
RAP-DB (Rice) LOC_Os07g10420.1 : expressed protein
MaizeGDB (Corn) Zm00025a045342 , Zm00025a028560 , Zm00025a028557 , Zm00025a028553
Brachypodium -
Barley HORVU1Hr1G042030.2 , HORVU1Hr1G042030.1 , HORVU1Hr1G042030.3
Wheat TraesCS1B02G174600 , TraesCS1D02G155900 , TraesCS1D02G155900 , TraesCS1B02G174600 , TraesCS1A02G158600 , TraesCS1A02G158600 , TraesCS1A02G158600
Populus -


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cDNA sequences
Sobic.002G072100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
2 Sobic.001G413000 ABC transporter family protein, putative, expressed -
3 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
4 Sobic.010G272800 OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed K03798: ftsH, cell division protease FtsH
5 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
6 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
7 Sobic.008G027200 rp1, putative, expressed -
8 Sobic.001G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
9 Sobic.003G129600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
10 Sobic.001G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
11 Sobic.009G082000 TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
13 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
14 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -
15 Sobic.006G083800 expressed protein -
16 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
17 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
18 Sobic.001G223550 - -
19 Sobic.002G193100 expressed protein -
20 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -


Gene co-expression network
sample Sobic002G072100 Sobic002G072100 Sobic001G029200 Sobic001G029200 Sobic002G072100--Sobic001G029200 Sobic001G413000 Sobic001G413000 Sobic002G072100--Sobic001G413000 Sobic010G035500 Sobic010G035500 Sobic002G072100--Sobic010G035500 Sobic010G272800 Sobic010G272800 Sobic002G072100--Sobic010G272800 Sobic006G259600 Sobic006G259600 Sobic002G072100--Sobic006G259600 Sobic008G081900 Sobic008G081900 Sobic002G072100--Sobic008G081900 Sobic008G027200 Sobic008G027200 Sobic002G072100--Sobic008G027200 Sobic001G086800 Sobic001G086800 Sobic002G072100--Sobic001G086800 Sobic003G129600 Sobic003G129600 Sobic002G072100--Sobic003G129600 Sobic001G029200--Sobic010G035500 Sobic004G300000 Sobic004G300000 Sobic001G029200--Sobic004G300000 Sobic009G019100 Sobic009G019100 Sobic001G029200--Sobic009G019100 Sobic001G029200--Sobic008G081900 Sobic009G213800 Sobic009G213800 Sobic001G029200--Sobic009G213800 Sobic007G227700 Sobic007G227700 Sobic001G029200--Sobic007G227700 Sobic002G193100 Sobic002G193100 Sobic001G029200--Sobic002G193100 Sobic004G026500 Sobic004G026500 Sobic001G029200--Sobic004G026500 Sobic002G339300 Sobic002G339300 Sobic001G029200--Sobic002G339300 Sobic002G173100 Sobic002G173100 Sobic001G413000--Sobic002G173100 Sobic001G413000--Sobic006G259600 Sobic001G243200 Sobic001G243200 Sobic001G413000--Sobic001G243200 Sobic007G090403 Sobic007G090403 Sobic001G413000--Sobic007G090403 Sobic003G080700 Sobic003G080700 Sobic001G413000--Sobic003G080700 Sobic005G179300 Sobic005G179300 Sobic001G413000--Sobic005G179300 Sobic009G082000 Sobic009G082000 Sobic001G413000--Sobic009G082000 Sobic003G160100 Sobic003G160100 Sobic001G413000--Sobic003G160100 Sobic009G219100 Sobic009G219100 Sobic001G413000--Sobic009G219100 Sobic010G035500--Sobic004G300000 Sobic010G035500--Sobic001G029200 Sobic006G214700 Sobic006G214700 Sobic010G035500--Sobic006G214700 Sobic002G025700 Sobic002G025700 Sobic010G035500--Sobic002G025700 Sobic006G201100 Sobic006G201100 Sobic010G035500--Sobic006G201100 Sobic009G141400 Sobic009G141400 Sobic010G035500--Sobic009G141400 Sobic010G035500--Sobic009G019100 Sobic010G035500--Sobic008G081900 Sobic006G193200 Sobic006G193200 Sobic010G035500--Sobic006G193200 Sobic010G223200 Sobic010G223200 Sobic010G272800--Sobic010G223200 Sobic003G301500 Sobic003G301500 Sobic010G272800--Sobic003G301500 Sobic002G129400 Sobic002G129400 Sobic010G272800--Sobic002G129400 Sobic010G043100 Sobic010G043100 Sobic010G272800--Sobic010G043100 Sobic001G062300 Sobic001G062300 Sobic010G272800--Sobic001G062300 Sobic001G223550 Sobic001G223550 Sobic010G272800--Sobic001G223550 Sobic009G241200 Sobic009G241200 Sobic010G272800--Sobic009G241200 Sobic009G011600 Sobic009G011600 Sobic010G272800--Sobic009G011600 Sobic010G020800 Sobic010G020800 Sobic010G272800--Sobic010G020800 Sobic006G090100 Sobic006G090100 Sobic006G259600--Sobic006G090100 Sobic001G207800 Sobic001G207800 Sobic006G259600--Sobic001G207800 Sobic003G166200 Sobic003G166200 Sobic006G259600--Sobic003G166200 Sobic002G081400 Sobic002G081400 Sobic006G259600--Sobic002G081400 Sobic006G212800 Sobic006G212800 Sobic006G259600--Sobic006G212800 Sobic009G073900 Sobic009G073900 Sobic006G259600--Sobic009G073900 Sobic001G509200 Sobic001G509200 Sobic006G259600--Sobic001G509200 Sobic006G259600--Sobic001G243200 Sobic001G077300 Sobic001G077300 Sobic006G259600--Sobic001G077300 Sobic008G081900--Sobic002G129400 Sobic001G219700 Sobic001G219700 Sobic008G081900--Sobic001G219700 Sobic004G307100 Sobic004G307100 Sobic008G081900--Sobic004G307100 Sobic008G081900--Sobic010G035500 Sobic007G166200 Sobic007G166200 Sobic008G081900--Sobic007G166200 Sobic007G169300 Sobic007G169300 Sobic008G081900--Sobic007G169300 Sobic008G081900--Sobic004G300000 Sobic008G081900--Sobic004G026500 Sobic006G030400 Sobic006G030400 Sobic008G081900--Sobic006G030400 Sobic002G373100 Sobic002G373100 Sobic008G027200--Sobic002G373100 Sobic007G084300 Sobic007G084300 Sobic008G027200--Sobic007G084300 Sobic008G027200--Sobic002G072100 Sobic003G080800 Sobic003G080800 Sobic008G027200--Sobic003G080800 Sobic002G118101 Sobic002G118101 Sobic008G027200--Sobic002G118101 Sobic005G045200 Sobic005G045200 Sobic008G027200--Sobic005G045200 Sobic006G060601 Sobic006G060601 Sobic008G027200--Sobic006G060601 Sobic001G053200 Sobic001G053200 Sobic008G027200--Sobic001G053200 Sobic001G275500 Sobic001G275500 Sobic008G027200--Sobic001G275500 Sobic009G147300 Sobic009G147300 Sobic001G086800--Sobic009G147300 Sobic001G086800--Sobic001G413000 Sobic002G390500 Sobic002G390500 Sobic001G086800--Sobic002G390500 Sobic001G086800--Sobic006G259600 Sobic002G136100 Sobic002G136100 Sobic001G086800--Sobic002G136100 Sobic001G086800--Sobic002G072100 Sobic006G243800 Sobic006G243800 Sobic001G086800--Sobic006G243800 Sobic001G086800--Sobic005G179300 Sobic008G060000 Sobic008G060000 Sobic001G086800--Sobic008G060000 Sobic003G157000 Sobic003G157000 Sobic003G129600--Sobic003G157000 Sobic003G129600--Sobic002G072100 Sobic005G093800 Sobic005G093800 Sobic003G129600--Sobic005G093800 Sobic009G130000 Sobic009G130000 Sobic003G129600--Sobic009G130000 Sobic006G177900 Sobic006G177900 Sobic003G129600--Sobic006G177900 Sobic003G129600--Sobic010G223200 Sobic010G092350 Sobic010G092350 Sobic003G129600--Sobic010G092350 Sobic006G051800 Sobic006G051800 Sobic003G129600--Sobic006G051800 Sobic006G276100 Sobic006G276100 Sobic003G129600--Sobic006G276100
Octagon: transcription factors


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