Gene annotation
Transcriptome id Sobic.009G082000.1
Synonym Sb09g007190, CRK10, RLK4
Functional annotation TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5YUT3
Pfam PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF126
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23180 : cysteine-rich RLK (RECEPTOR-like protein kinase) 10
RAP-DB (Rice) LOC_Os07g35690.2 : TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a048287 , Zm00025a040512
Brachypodium KQK15898 , KQK15896 , KQK15897 , PNT74971 , PNT74972 , KQK15879 , KQK15889 , KQK15900 , KQK15901 , PNT74980 , PNT74981 , PNT74982
Barley -
Wheat TraesCS2D02G221400 , TraesCS2D02G221400 , TraesCS2D02G221400 , TraesCS2D02G221400 , TraesCS6D02G013400 , TraesCS6D02G013400 , TraesCS5B02G437300 , TraesCS2B02G240800 , TraesCS2B02G240800 , TraesCS2B02G240800 , TraesCS2A02G215800 , TraesCS2A02G215800 , TraesCS2A02G215800 , TraesCS5A02G434300
Populus -


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cDNA sequences
Sobic.009G082000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G413000 ABC transporter family protein, putative, expressed -
2 Sobic.008G081300 protein kinase, putative, expressed -
3 Sobic.010G196500 zinc-binding protein, putative, expressed -
4 Sobic.005G075100 rp3 protein, putative, expressed -
5 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -
6 Sobic.001G081200 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
7 Sobic.003G086900 C2 domain containing protein, putative, expressed -
8 Sobic.002G193100 expressed protein -
9 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
10 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
12 Sobic.006G060601 - -
13 Sobic.003G224100 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
14 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
15 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
16 Sobic.004G189900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed K13418: somatic embryogenesis receptor kinase 1
17 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.002G200700 expressed protein -
19 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
20 Sobic.001G049500 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X


Gene co-expression network
sample Sobic009G082000 Sobic009G082000 Sobic001G413000 Sobic001G413000 Sobic009G082000--Sobic001G413000 Sobic008G081300 Sobic008G081300 Sobic009G082000--Sobic008G081300 Sobic010G196500 Sobic010G196500 Sobic009G082000--Sobic010G196500 Sobic005G075100 Sobic005G075100 Sobic009G082000--Sobic005G075100 Sobic002G001000 Sobic002G001000 Sobic009G082000--Sobic002G001000 Sobic001G081200 Sobic001G081200 Sobic009G082000--Sobic001G081200 Sobic003G086900 Sobic003G086900 Sobic009G082000--Sobic003G086900 Sobic002G193100 Sobic002G193100 Sobic009G082000--Sobic002G193100 Sobic002G339300 Sobic002G339300 Sobic009G082000--Sobic002G339300 Sobic002G173100 Sobic002G173100 Sobic001G413000--Sobic002G173100 Sobic006G259600 Sobic006G259600 Sobic001G413000--Sobic006G259600 Sobic001G243200 Sobic001G243200 Sobic001G413000--Sobic001G243200 Sobic007G090403 Sobic007G090403 Sobic001G413000--Sobic007G090403 Sobic003G080700 Sobic003G080700 Sobic001G413000--Sobic003G080700 Sobic005G179300 Sobic005G179300 Sobic001G413000--Sobic005G179300 Sobic001G413000--Sobic009G082000 Sobic003G160100 Sobic003G160100 Sobic001G413000--Sobic003G160100 Sobic009G219100 Sobic009G219100 Sobic001G413000--Sobic009G219100 Sobic010G013200 Sobic010G013200 Sobic008G081300--Sobic010G013200 Sobic001G049500 Sobic001G049500 Sobic008G081300--Sobic001G049500 Sobic006G083800 Sobic006G083800 Sobic008G081300--Sobic006G083800 Sobic008G081300--Sobic002G001000 Sobic008G172300 Sobic008G172300 Sobic008G081300--Sobic008G172300 Sobic001G268200 Sobic001G268200 Sobic008G081300--Sobic001G268200 Sobic001G396000 Sobic001G396000 Sobic008G081300--Sobic001G396000 Sobic001G402500 Sobic001G402500 Sobic008G081300--Sobic001G402500 Sobic004G026500 Sobic004G026500 Sobic008G081300--Sobic004G026500 Sobic001G488700 Sobic001G488700 Sobic010G196500--Sobic001G488700 Sobic001G500800 Sobic001G500800 Sobic010G196500--Sobic001G500800 Sobic010G196500--Sobic003G086900 Sobic010G196500--Sobic002G193100 Sobic007G084300 Sobic007G084300 Sobic010G196500--Sobic007G084300 Sobic002G386100 Sobic002G386100 Sobic010G196500--Sobic002G386100 Sobic008G146900 Sobic008G146900 Sobic010G196500--Sobic008G146900 Sobic001G381200 Sobic001G381200 Sobic010G196500--Sobic001G381200 Sobic002G187700 Sobic002G187700 Sobic010G196500--Sobic002G187700 Sobic002G115050 Sobic002G115050 Sobic005G075100--Sobic002G115050 Sobic004G181600 Sobic004G181600 Sobic005G075100--Sobic004G181600 Sobic005G075100--Sobic002G173100 Sobic002G345700 Sobic002G345700 Sobic005G075100--Sobic002G345700 Sobic003G190000 Sobic003G190000 Sobic005G075100--Sobic003G190000 Sobic010G141966 Sobic010G141966 Sobic005G075100--Sobic010G141966 Sobic006G133900 Sobic006G133900 Sobic005G075100--Sobic006G133900 Sobic006G219600 Sobic006G219600 Sobic005G075100--Sobic006G219600 Sobic009G097200 Sobic009G097200 Sobic005G075100--Sobic009G097200 Sobic007G227700 Sobic007G227700 Sobic002G001000--Sobic007G227700 Sobic002G200700 Sobic002G200700 Sobic002G001000--Sobic002G200700 Sobic004G207400 Sobic004G207400 Sobic002G001000--Sobic004G207400 Sobic010G140600 Sobic010G140600 Sobic002G001000--Sobic010G140600 Sobic001G072700 Sobic001G072700 Sobic002G001000--Sobic001G072700 Sobic002G001000--Sobic010G013200 Sobic008G089900 Sobic008G089900 Sobic002G001000--Sobic008G089900 Sobic003G403500 Sobic003G403500 Sobic002G001000--Sobic003G403500 Sobic003G224100 Sobic003G224100 Sobic002G001000--Sobic003G224100 Sobic010G143800 Sobic010G143800 Sobic001G081200--Sobic010G143800 Sobic004G178500 Sobic004G178500 Sobic001G081200--Sobic004G178500 Sobic002G064750 Sobic002G064750 Sobic001G081200--Sobic002G064750 Sobic001G191600 Sobic001G191600 Sobic001G081200--Sobic001G191600 Sobic001G222250 Sobic001G222250 Sobic001G081200--Sobic001G222250 Sobic002G031400 Sobic002G031400 Sobic001G081200--Sobic002G031400 Sobic004G181700 Sobic004G181700 Sobic001G081200--Sobic004G181700 Sobic006G145200 Sobic006G145200 Sobic001G081200--Sobic006G145200 Sobic003G217700 Sobic003G217700 Sobic001G081200--Sobic003G217700 Sobic007G193700 Sobic007G193700 Sobic003G086900--Sobic007G193700 Sobic006G225900 Sobic006G225900 Sobic003G086900--Sobic006G225900 Sobic003G086900--Sobic010G196500 Sobic004G174200 Sobic004G174200 Sobic003G086900--Sobic004G174200 Sobic001G016700 Sobic001G016700 Sobic003G086900--Sobic001G016700 Sobic001G390800 Sobic001G390800 Sobic003G086900--Sobic001G390800 Sobic003G086900--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic003G086900--Sobic001G121200 Sobic003G422500 Sobic003G422500 Sobic003G086900--Sobic003G422500 Sobic002G193100--Sobic004G026500 Sobic002G193100--Sobic010G196500 Sobic002G193100--Sobic007G227700 Sobic007G169300 Sobic007G169300 Sobic002G193100--Sobic007G169300 Sobic002G276100 Sobic002G276100 Sobic002G193100--Sobic002G276100 Sobic006G065600 Sobic006G065600 Sobic002G193100--Sobic006G065600 Sobic003G343500 Sobic003G343500 Sobic002G193100--Sobic003G343500 Sobic001G219700 Sobic001G219700 Sobic002G193100--Sobic001G219700 Sobic002G193100--Sobic002G345700 Sobic004G262700 Sobic004G262700 Sobic002G339300--Sobic004G262700 Sobic002G339300--Sobic004G026500 Sobic009G193500 Sobic009G193500 Sobic002G339300--Sobic009G193500 Sobic001G124100 Sobic001G124100 Sobic002G339300--Sobic001G124100 Sobic002G339300--Sobic001G396000 Sobic003G193200 Sobic003G193200 Sobic002G339300--Sobic003G193200 Sobic002G339300--Sobic003G190000 Sobic002G168500 Sobic002G168500 Sobic002G339300--Sobic002G168500 Sobic010G197000 Sobic010G197000 Sobic002G339300--Sobic010G197000
Octagon: transcription factors


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