Gene annotation
Transcriptome id Sobic.006G060601.1
Synonym -
Functional annotation -
UniProt A0A1Z5RCI4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
2 Sobic.010G077400 nitrilase, putative, expressed K13566: NIT2, omega-amidase
3 Sobic.001G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
4 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
5 Sobic.003G422800 amino acid permease family protein, putative, expressed -
6 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
7 Sobic.003G359500 expressed protein -
8 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
9 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
10 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
11 Sobic.002G362100 expressed protein -
12 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
13 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
14 Sobic.009G082000 TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
15 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
16 Sobic.008G065200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor protein kinase, putative, expressed -
17 Sobic.003G080800 expressed protein -
18 Sobic.003G014300 expressed protein -
19 Sobic.002G137100 protein kinase family protein, putative, expressed -
20 Sobic.010G205700 Leucine Rich Repeat family protein, expressed -


Gene co-expression network
sample Sobic006G060601 Sobic006G060601 Sobic009G213800 Sobic009G213800 Sobic006G060601--Sobic009G213800 Sobic010G077400 Sobic010G077400 Sobic006G060601--Sobic010G077400 Sobic001G275500 Sobic001G275500 Sobic006G060601--Sobic001G275500 Sobic005G175500 Sobic005G175500 Sobic006G060601--Sobic005G175500 Sobic003G422800 Sobic003G422800 Sobic006G060601--Sobic003G422800 Sobic010G207500 Sobic010G207500 Sobic006G060601--Sobic010G207500 Sobic003G359500 Sobic003G359500 Sobic006G060601--Sobic003G359500 Sobic009G019100 Sobic009G019100 Sobic006G060601--Sobic009G019100 Sobic002G025700 Sobic002G025700 Sobic006G060601--Sobic002G025700 Sobic009G213800--Sobic009G019100 Sobic009G213800--Sobic001G275500 Sobic009G213800--Sobic006G060601 Sobic001G029200 Sobic001G029200 Sobic009G213800--Sobic001G029200 Sobic010G035500 Sobic010G035500 Sobic009G213800--Sobic010G035500 Sobic009G213800--Sobic003G359500 Sobic006G201100 Sobic006G201100 Sobic009G213800--Sobic006G201100 Sobic002G046900 Sobic002G046900 Sobic009G213800--Sobic002G046900 Sobic004G300000 Sobic004G300000 Sobic009G213800--Sobic004G300000 Sobic010G077400--Sobic006G060601 Sobic003G381200 Sobic003G381200 Sobic010G077400--Sobic003G381200 Sobic002G339300 Sobic002G339300 Sobic010G077400--Sobic002G339300 Sobic003G127001 Sobic003G127001 Sobic010G077400--Sobic003G127001 Sobic006G030400 Sobic006G030400 Sobic010G077400--Sobic006G030400 Sobic003G086900 Sobic003G086900 Sobic010G077400--Sobic003G086900 Sobic001G081200 Sobic001G081200 Sobic010G077400--Sobic001G081200 Sobic004G210900 Sobic004G210900 Sobic010G077400--Sobic004G210900 Sobic004G026500 Sobic004G026500 Sobic010G077400--Sobic004G026500 Sobic001G275500--Sobic009G213800 Sobic001G275500--Sobic006G060601 Sobic001G275500--Sobic009G019100 Sobic001G275500--Sobic003G359500 Sobic002G217200 Sobic002G217200 Sobic001G275500--Sobic002G217200 Sobic002G072100 Sobic002G072100 Sobic001G275500--Sobic002G072100 Sobic006G030600 Sobic006G030600 Sobic001G275500--Sobic006G030600 Sobic001G275500--Sobic001G029200 Sobic007G084300 Sobic007G084300 Sobic001G275500--Sobic007G084300 Sobic003G014300 Sobic003G014300 Sobic005G175500--Sobic003G014300 Sobic006G258700 Sobic006G258700 Sobic005G175500--Sobic006G258700 Sobic005G175600 Sobic005G175600 Sobic005G175500--Sobic005G175600 Sobic005G175500--Sobic004G300000 Sobic005G175500--Sobic006G060601 Sobic001G224900 Sobic001G224900 Sobic005G175500--Sobic001G224900 Sobic001G404500 Sobic001G404500 Sobic005G175500--Sobic001G404500 Sobic005G175500--Sobic009G019100 Sobic005G175500--Sobic010G207500 Sobic003G422800--Sobic006G060601 Sobic006G220600 Sobic006G220600 Sobic003G422800--Sobic006G220600 Sobic003G068600 Sobic003G068600 Sobic003G422800--Sobic003G068600 Sobic002G163700 Sobic002G163700 Sobic003G422800--Sobic002G163700 Sobic001G121100 Sobic001G121100 Sobic003G422800--Sobic001G121100 Sobic003G422800--Sobic010G207500 Sobic003G422800--Sobic004G210900 Sobic002G287000 Sobic002G287000 Sobic003G422800--Sobic002G287000 Sobic003G422800--Sobic005G175500 Sobic010G207500--Sobic002G025700 Sobic010G207500--Sobic006G201100 Sobic010G207500--Sobic004G300000 Sobic002G362100 Sobic002G362100 Sobic010G207500--Sobic002G362100 Sobic010G207500--Sobic002G046900 Sobic010G207500--Sobic010G035500 Sobic004G164200 Sobic004G164200 Sobic010G207500--Sobic004G164200 Sobic009G141400 Sobic009G141400 Sobic010G207500--Sobic009G141400 Sobic001G351400 Sobic001G351400 Sobic010G207500--Sobic001G351400 Sobic003G359500--Sobic004G300000 Sobic003G359500--Sobic002G025700 Sobic003G359500--Sobic010G035500 Sobic003G359500--Sobic009G213800 Sobic006G214700 Sobic006G214700 Sobic003G359500--Sobic006G214700 Sobic003G359500--Sobic006G201100 Sobic003G359500--Sobic009G019100 Sobic010G197000 Sobic010G197000 Sobic003G359500--Sobic010G197000 Sobic003G359500--Sobic006G060601 Sobic009G019100--Sobic009G213800 Sobic009G019100--Sobic010G035500 Sobic009G019100--Sobic001G029200 Sobic009G019100--Sobic002G046900 Sobic009G019100--Sobic004G300000 Sobic009G019100--Sobic005G175500 Sobic008G081900 Sobic008G081900 Sobic009G019100--Sobic008G081900 Sobic009G019100--Sobic003G359500 Sobic003G306700 Sobic003G306700 Sobic009G019100--Sobic003G306700 Sobic002G025700--Sobic004G300000 Sobic004G089200 Sobic004G089200 Sobic002G025700--Sobic004G089200 Sobic002G025700--Sobic010G035500 Sobic002G025700--Sobic003G359500 Sobic002G025700--Sobic010G207500 Sobic002G354600 Sobic002G354600 Sobic002G025700--Sobic002G354600 Sobic004G165900 Sobic004G165900 Sobic002G025700--Sobic004G165900 Sobic010G205700 Sobic010G205700 Sobic002G025700--Sobic010G205700 Sobic006G193200 Sobic006G193200 Sobic002G025700--Sobic006G193200
Octagon: transcription factors


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