Gene annotation
Transcriptome id Sobic.002G339300.1
Synonym ATMYOS1, ATM2, ATM4, Sb02g036390
Functional annotation myosin-Vb, putative, expressed
UniProt C5XBI2
Pfam PF02736 PF00612 PF00063
Panther DB PTHR13140 PTHR13140:SF439
NCBI CDD -
KEGG Orthology K10357; myosin V
Gene Ontology GO:0016459; myosin complex GO:0005524ATP binding GO:0003774motor activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT5G54280 : myosin 2
RAP-DB (Rice) LOC_Os07g37560.1 : myosin-Vb, putative, expressed
MaizeGDB (Corn) Zm00025a029695 , Zm00025a048388 , Zm00025a026027 , Zm00025a027141 , Zm00025a014905 , Zm00025a021176 , Zm00025a013512
Brachypodium KQJ97208 , PNT67604 , KQK15762
Barley HORVU2Hr1G040730.1
Wheat TraesCS2D02G211200 , TraesCS2D02G211200 , TraesCS2D02G211200 , TraesCS2D02G211200 , TraesCS2D02G211200 , TraesCS2A02G204700 , TraesCS2A02G204700 , TraesCS2B02G232300 , TraesCS2B02G232300 , TraesCS2B02G232300 , TraesCS2B02G232300
Populus PNT35710 , PNT27615 , PNT27616 , PNT27617


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G262700 - -
2 Sobic.004G026500 expressed protein -
3 Sobic.009G193500 AGAP007115-PA, putative, expressed -
4 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
5 Sobic.001G396000 OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed -
6 Sobic.003G193200 expressed protein -
7 Sobic.003G190000 PPR repeat domain containing protein, putative, expressed -
8 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
9 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
10 Sobic.005G142800 exportin 1, putative, expressed K15436: TRPO3, transportin-3
11 Sobic.001G219700 pentatricopeptide, putative, expressed -
12 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
13 Sobic.001G300100 - -
14 Sobic.002G345700 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
15 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
16 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
17 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
18 Sobic.006G030400 xa21, putative, expressed -
19 Sobic.002G316600 expressed protein -
20 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G339300 Sobic002G339300 Sobic004G262700 Sobic004G262700 Sobic002G339300--Sobic004G262700 Sobic004G026500 Sobic004G026500 Sobic002G339300--Sobic004G026500 Sobic009G193500 Sobic009G193500 Sobic002G339300--Sobic009G193500 Sobic001G124100 Sobic001G124100 Sobic002G339300--Sobic001G124100 Sobic001G396000 Sobic001G396000 Sobic002G339300--Sobic001G396000 Sobic003G193200 Sobic003G193200 Sobic002G339300--Sobic003G193200 Sobic003G190000 Sobic003G190000 Sobic002G339300--Sobic003G190000 Sobic002G168500 Sobic002G168500 Sobic002G339300--Sobic002G168500 Sobic010G197000 Sobic010G197000 Sobic002G339300--Sobic010G197000 Sobic004G262700--Sobic002G339300 Sobic004G262700--Sobic001G396000 Sobic001G501300 Sobic001G501300 Sobic004G262700--Sobic001G501300 Sobic005G026000 Sobic005G026000 Sobic004G262700--Sobic005G026000 Sobic004G262700--Sobic004G026500 Sobic004G262700--Sobic009G193500 Sobic004G262700--Sobic001G124100 Sobic008G172300 Sobic008G172300 Sobic004G262700--Sobic008G172300 Sobic002G345700 Sobic002G345700 Sobic004G262700--Sobic002G345700 Sobic004G026500--Sobic008G172300 Sobic004G026500--Sobic001G124100 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic009G193500--Sobic004G026500 Sobic009G193500--Sobic002G339300 Sobic009G193500--Sobic002G276100 Sobic009G193500--Sobic001G124100 Sobic007G103100 Sobic007G103100 Sobic009G193500--Sobic007G103100 Sobic009G193500--Sobic002G168500 Sobic009G193500--Sobic008G172300 Sobic009G193500--Sobic001G219700 Sobic006G186600 Sobic006G186600 Sobic009G193500--Sobic006G186600 Sobic001G124100--Sobic004G026500 Sobic001G124100--Sobic001G219700 Sobic005G142800 Sobic005G142800 Sobic001G124100--Sobic005G142800 Sobic001G124100--Sobic008G172300 Sobic001G124100--Sobic001G396000 Sobic001G124100--Sobic002G339300 Sobic001G124100--Sobic002G168500 Sobic006G233700 Sobic006G233700 Sobic001G124100--Sobic006G233700 Sobic006G219600 Sobic006G219600 Sobic001G124100--Sobic006G219600 Sobic001G396000--Sobic001G124100 Sobic001G396000--Sobic004G262700 Sobic001G396000--Sobic002G345700 Sobic001G396000--Sobic002G339300 Sobic010G013200 Sobic010G013200 Sobic001G396000--Sobic010G013200 Sobic002G146300 Sobic002G146300 Sobic001G396000--Sobic002G146300 Sobic001G396000--Sobic007G103100 Sobic001G396000--Sobic001G219700 Sobic002G193100 Sobic002G193100 Sobic001G396000--Sobic002G193100 Sobic003G193200--Sobic002G339300 Sobic002G418600 Sobic002G418600 Sobic003G193200--Sobic002G418600 Sobic006G119400 Sobic006G119400 Sobic003G193200--Sobic006G119400 Sobic010G100800 Sobic010G100800 Sobic003G193200--Sobic010G100800 Sobic009G052700 Sobic009G052700 Sobic003G193200--Sobic009G052700 Sobic003G193200--Sobic001G501300 Sobic003G193200--Sobic005G026000 Sobic003G193200--Sobic001G124100 Sobic002G031700 Sobic002G031700 Sobic003G193200--Sobic002G031700 Sobic001G060500 Sobic001G060500 Sobic003G190000--Sobic001G060500 Sobic002G073200 Sobic002G073200 Sobic003G190000--Sobic002G073200 Sobic002G173100 Sobic002G173100 Sobic003G190000--Sobic002G173100 Sobic003G190000--Sobic010G197000 Sobic003G190000--Sobic003G203300 Sobic009G014100 Sobic009G014100 Sobic003G190000--Sobic009G014100 Sobic005G075100 Sobic005G075100 Sobic003G190000--Sobic005G075100 Sobic003G190000--Sobic005G142800 Sobic003G190000--Sobic001G219700 Sobic002G168500--Sobic002G276100 Sobic002G168500--Sobic001G124100 Sobic002G168500--Sobic004G026500 Sobic002G168500--Sobic009G193500 Sobic002G168500--Sobic008G172300 Sobic002G168500--Sobic002G339300 Sobic005G014700 Sobic005G014700 Sobic002G168500--Sobic005G014700 Sobic002G168300 Sobic002G168300 Sobic002G168500--Sobic002G168300 Sobic003G381200 Sobic003G381200 Sobic002G168500--Sobic003G381200 Sobic010G197000--Sobic009G014100 Sobic002G354600 Sobic002G354600 Sobic010G197000--Sobic002G354600 Sobic005G138600 Sobic005G138600 Sobic010G197000--Sobic005G138600 Sobic004G300000 Sobic004G300000 Sobic010G197000--Sobic004G300000 Sobic010G109600 Sobic010G109600 Sobic010G197000--Sobic010G109600 Sobic010G197000--Sobic003G190000 Sobic002G331800 Sobic002G331800 Sobic010G197000--Sobic002G331800 Sobic006G214700 Sobic006G214700 Sobic010G197000--Sobic006G214700 Sobic010G197000--Sobic008G172300
Octagon: transcription factors


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