Gene annotation
Transcriptome id Sobic.009G193500.1
Synonym Sb09g025210
Functional annotation AGAP007115-PA, putative, expressed
UniProt A0A1Z5R3H1
Pfam PF07942
Panther DB PTHR12303 PTHR12303:SF6
NCBI CDD KOG2798; Putative trehalase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32170 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os05g43560.1 : AGAP007115-PA, putative, expressed
MaizeGDB (Corn) Zm00025a044200
Brachypodium KQK05468 , KQK05469
Barley HORVU1Hr1G077360.8 , HORVU1Hr1G077360.9 , HORVU1Hr1G077360.1 , HORVU1Hr1G077360.2 , HORVU1Hr1G077360.3 , HORVU1Hr1G077360.4 , HORVU1Hr1G077360.5 , HORVU1Hr1G077360.6 , HORVU1Hr1G077360.7 , HORVU1Hr1G077360.23 , HORVU1Hr1G077360.22 , HORVU1Hr1G077360.21 , HORVU1Hr1G077360.20 , HORVU1Hr1G077360.24 , HORVU1Hr1G077360.12 , HORVU1Hr1G077360.13 , HORVU1Hr1G077360.10 , HORVU1Hr1G077360.11 , HORVU1Hr1G077360.16 , HORVU1Hr1G077360.17 , HORVU1Hr1G077360.14 , HORVU1Hr1G077360.15 , HORVU1Hr1G077360.18 , HORVU1Hr1G077360.19
Wheat TraesCS1A02G330700 , TraesCS1A02G330700 , TraesCS1B02G344400 , TraesCS1D02G333200
Populus -


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cDNA sequences
Sobic.009G193500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G026500 expressed protein -
2 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
3 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
4 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
5 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
6 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
7 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
8 Sobic.001G219700 pentatricopeptide, putative, expressed -
9 Sobic.006G186600 dihydrodipicolinate synthase, chloroplast precursor, putative, expressed K01714: 4-hydroxy-tetrahydrodipicolinate synthase
10 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
11 Sobic.004G262700 - -
12 Sobic.002G127550 - -
13 Sobic.002G316600 expressed protein -
14 Sobic.001G300100 - -
15 Sobic.001G120500 toc64, putative, expressed -
16 Sobic.005G142800 exportin 1, putative, expressed K15436: TRPO3, transportin-3
17 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
18 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
19 Sobic.002G168300 RGH2B, putative, expressed -
20 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase


Gene co-expression network
sample Sobic009G193500 Sobic009G193500 Sobic004G026500 Sobic004G026500 Sobic009G193500--Sobic004G026500 Sobic002G339300 Sobic002G339300 Sobic009G193500--Sobic002G339300 Sobic002G276100 Sobic002G276100 Sobic009G193500--Sobic002G276100 Sobic001G124100 Sobic001G124100 Sobic009G193500--Sobic001G124100 Sobic007G103100 Sobic007G103100 Sobic009G193500--Sobic007G103100 Sobic002G168500 Sobic002G168500 Sobic009G193500--Sobic002G168500 Sobic008G172300 Sobic008G172300 Sobic009G193500--Sobic008G172300 Sobic001G219700 Sobic001G219700 Sobic009G193500--Sobic001G219700 Sobic006G186600 Sobic006G186600 Sobic009G193500--Sobic006G186600 Sobic004G026500--Sobic008G172300 Sobic004G026500--Sobic001G124100 Sobic004G026500--Sobic009G193500 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic004G026500--Sobic002G276100 Sobic004G262700 Sobic004G262700 Sobic002G339300--Sobic004G262700 Sobic002G339300--Sobic004G026500 Sobic002G339300--Sobic009G193500 Sobic002G339300--Sobic001G124100 Sobic001G396000 Sobic001G396000 Sobic002G339300--Sobic001G396000 Sobic003G193200 Sobic003G193200 Sobic002G339300--Sobic003G193200 Sobic003G190000 Sobic003G190000 Sobic002G339300--Sobic003G190000 Sobic002G339300--Sobic002G168500 Sobic010G197000 Sobic010G197000 Sobic002G339300--Sobic010G197000 Sobic003G381200 Sobic003G381200 Sobic002G276100--Sobic003G381200 Sobic002G276100--Sobic004G026500 Sobic004G181700 Sobic004G181700 Sobic002G276100--Sobic004G181700 Sobic001G159400 Sobic001G159400 Sobic002G276100--Sobic001G159400 Sobic010G138000 Sobic010G138000 Sobic002G276100--Sobic010G138000 Sobic002G276100--Sobic002G168500 Sobic002G276100--Sobic009G193500 Sobic002G276100--Sobic008G172300 Sobic001G268200 Sobic001G268200 Sobic002G276100--Sobic001G268200 Sobic001G124100--Sobic004G026500 Sobic001G124100--Sobic001G219700 Sobic005G142800 Sobic005G142800 Sobic001G124100--Sobic005G142800 Sobic001G124100--Sobic008G172300 Sobic001G124100--Sobic001G396000 Sobic001G124100--Sobic002G339300 Sobic001G124100--Sobic002G168500 Sobic006G233700 Sobic006G233700 Sobic001G124100--Sobic006G233700 Sobic006G219600 Sobic006G219600 Sobic001G124100--Sobic006G219600 Sobic002G316600 Sobic002G316600 Sobic007G103100--Sobic002G316600 Sobic003G186000 Sobic003G186000 Sobic007G103100--Sobic003G186000 Sobic001G194200 Sobic001G194200 Sobic007G103100--Sobic001G194200 Sobic004G291900 Sobic004G291900 Sobic007G103100--Sobic004G291900 Sobic004G276400 Sobic004G276400 Sobic007G103100--Sobic004G276400 Sobic001G527800 Sobic001G527800 Sobic007G103100--Sobic001G527800 Sobic003G205200 Sobic003G205200 Sobic007G103100--Sobic003G205200 Sobic002G275700 Sobic002G275700 Sobic007G103100--Sobic002G275700 Sobic006G055200 Sobic006G055200 Sobic007G103100--Sobic006G055200 Sobic002G168500--Sobic002G276100 Sobic002G168500--Sobic001G124100 Sobic002G168500--Sobic004G026500 Sobic002G168500--Sobic009G193500 Sobic002G168500--Sobic008G172300 Sobic002G168500--Sobic002G339300 Sobic005G014700 Sobic005G014700 Sobic002G168500--Sobic005G014700 Sobic002G168300 Sobic002G168300 Sobic002G168500--Sobic002G168300 Sobic002G168500--Sobic003G381200 Sobic008G172300--Sobic004G026500 Sobic009G014100 Sobic009G014100 Sobic008G172300--Sobic009G014100 Sobic003G340600 Sobic003G340600 Sobic008G172300--Sobic003G340600 Sobic002G345700 Sobic002G345700 Sobic008G172300--Sobic002G345700 Sobic008G172300--Sobic001G124100 Sobic008G172300--Sobic010G197000 Sobic008G172300--Sobic005G142800 Sobic008G172300--Sobic002G168300 Sobic002G167500 Sobic002G167500 Sobic008G172300--Sobic002G167500 Sobic001G219700--Sobic006G233700 Sobic001G219700--Sobic004G026500 Sobic001G219700--Sobic001G124100 Sobic001G219700--Sobic003G203300 Sobic008G081900 Sobic008G081900 Sobic001G219700--Sobic008G081900 Sobic002G129400 Sobic002G129400 Sobic001G219700--Sobic002G129400 Sobic005G084500 Sobic005G084500 Sobic001G219700--Sobic005G084500 Sobic009G241200 Sobic009G241200 Sobic001G219700--Sobic009G241200 Sobic002G349100 Sobic002G349100 Sobic001G219700--Sobic002G349100 Sobic001G102500 Sobic001G102500 Sobic006G186600--Sobic001G102500 Sobic002G431300 Sobic002G431300 Sobic006G186600--Sobic002G431300 Sobic004G333400 Sobic004G333400 Sobic006G186600--Sobic004G333400 Sobic008G089500 Sobic008G089500 Sobic006G186600--Sobic008G089500 Sobic006G186600--Sobic009G193500 Sobic006G094300 Sobic006G094300 Sobic006G186600--Sobic006G094300 Sobic008G130900 Sobic008G130900 Sobic006G186600--Sobic008G130900 Sobic010G109600 Sobic010G109600 Sobic006G186600--Sobic010G109600 Sobic005G002900 Sobic005G002900 Sobic006G186600--Sobic005G002900
Octagon: transcription factors


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