Gene annotation
Transcriptome id Sobic.001G120500.1
Synonym Sb01g010650, atToc64-III, TOC64-III
Functional annotation toc64, putative, expressed
UniProt C5WNR1
Pfam PF13414 PF01425
Panther DB PTHR11895 PTHR11895:SF39
NCBI CDD KOG1211; Amidases
KEGG Orthology -
Gene Ontology GO:0016884; carbon-nitrogen ligase activity, with glutamine as amido-N-donor


Orthologs (automatic annotation)
TAIR AT3G17970 : translocon at the outer membrane of chloroplasts 64-III
RAP-DB (Rice) LOC_Os03g50010.1 : toc64, putative, expressed
MaizeGDB (Corn) Zm00025a017021 , Zm00025a007786
Brachypodium KQK13579
Barley HORVU4Hr1G006870.1 , HORVU4Hr1G006870.3 , HORVU4Hr1G006870.2 , HORVU4Hr1G006870.5 , HORVU4Hr1G006870.4 , HORVU4Hr1G006870.6
Wheat TraesCS4A02G270900 , TraesCS4A02G270900 , TraesCS4A02G270900 , TraesCS4D02G040700 , TraesCS4B02G043200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
2 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
3 Sobic.001G244300 GA19388-PA, putative, expressed K10768: alkylated DNA repair protein alkB homolog 6
4 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
5 Sobic.006G217000 imidazoleglycerol-phosphate dehydratase, putative, expressed K01693: imidazoleglycerol-phosphate dehydratase
6 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
7 Sobic.008G051200 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
8 Sobic.009G056200 arginyl-tRNA synthetase, putative, expressed K01887: RARS, arginyl-tRNA synthetase
9 Sobic.009G193500 AGAP007115-PA, putative, expressed -
10 Sobic.007G165600 aminopeptidase, putative, expressed K01256: aminopeptidase N
11 Sobic.004G040900 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
12 Sobic.001G401700 aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
13 Sobic.001G402500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
14 Sobic.002G343400 tic20, putative, expressed -
15 Sobic.004G171200 WD domain, G-beta repeat domain containing protein, expressed K13124: mitogen-activated protein kinase organizer 1
16 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
17 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
18 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
19 Sobic.001G058200 PPR repeat domain containing protein, putative, expressed -
20 Sobic.005G072100 preprotein translocase secA family protein, putative, expressed K03070: preprotein translocase subunit SecA


Gene co-expression network
sample Sobic001G120500 Sobic001G120500 Sobic010G265300 Sobic010G265300 Sobic001G120500--Sobic010G265300 Sobic005G172500 Sobic005G172500 Sobic001G120500--Sobic005G172500 Sobic001G244300 Sobic001G244300 Sobic001G120500--Sobic001G244300 Sobic001G493200 Sobic001G493200 Sobic001G120500--Sobic001G493200 Sobic006G217000 Sobic006G217000 Sobic001G120500--Sobic006G217000 Sobic007G103100 Sobic007G103100 Sobic001G120500--Sobic007G103100 Sobic008G051200 Sobic008G051200 Sobic001G120500--Sobic008G051200 Sobic009G056200 Sobic009G056200 Sobic001G120500--Sobic009G056200 Sobic009G193500 Sobic009G193500 Sobic001G120500--Sobic009G193500 Sobic010G265300--Sobic001G120500 Sobic005G160400 Sobic005G160400 Sobic010G265300--Sobic005G160400 Sobic010G092300 Sobic010G092300 Sobic010G265300--Sobic010G092300 Sobic010G265300--Sobic005G172500 Sobic008G076800 Sobic008G076800 Sobic010G265300--Sobic008G076800 Sobic004G092500 Sobic004G092500 Sobic010G265300--Sobic004G092500 Sobic007G084100 Sobic007G084100 Sobic010G265300--Sobic007G084100 Sobic004G257100 Sobic004G257100 Sobic010G265300--Sobic004G257100 Sobic001G226700 Sobic001G226700 Sobic010G265300--Sobic001G226700 Sobic004G131300 Sobic004G131300 Sobic005G172500--Sobic004G131300 Sobic006G148100 Sobic006G148100 Sobic005G172500--Sobic006G148100 Sobic005G172500--Sobic009G056200 Sobic005G172500--Sobic001G493200 Sobic001G227400 Sobic001G227400 Sobic005G172500--Sobic001G227400 Sobic002G371300 Sobic002G371300 Sobic005G172500--Sobic002G371300 Sobic002G142900 Sobic002G142900 Sobic005G172500--Sobic002G142900 Sobic003G408600 Sobic003G408600 Sobic005G172500--Sobic003G408600 Sobic005G172500--Sobic004G257100 Sobic001G244300--Sobic001G120500 Sobic008G063300 Sobic008G063300 Sobic001G244300--Sobic008G063300 Sobic001G407700 Sobic001G407700 Sobic001G244300--Sobic001G407700 Sobic001G244300--Sobic005G172500 Sobic001G244300--Sobic009G056200 Sobic007G102700 Sobic007G102700 Sobic001G244300--Sobic007G102700 Sobic001G058200 Sobic001G058200 Sobic001G244300--Sobic001G058200 Sobic004G156800 Sobic004G156800 Sobic001G244300--Sobic004G156800 Sobic001G401500 Sobic001G401500 Sobic001G244300--Sobic001G401500 Sobic009G084900 Sobic009G084900 Sobic001G493200--Sobic009G084900 Sobic003G266001 Sobic003G266001 Sobic001G493200--Sobic003G266001 Sobic010G059500 Sobic010G059500 Sobic001G493200--Sobic010G059500 Sobic001G433800 Sobic001G433800 Sobic001G493200--Sobic001G433800 Sobic004G072100 Sobic004G072100 Sobic001G493200--Sobic004G072100 Sobic004G096400 Sobic004G096400 Sobic001G493200--Sobic004G096400 Sobic007G132100 Sobic007G132100 Sobic001G493200--Sobic007G132100 Sobic006G077200 Sobic006G077200 Sobic001G493200--Sobic006G077200 Sobic001G493200--Sobic003G408600 Sobic001G401700 Sobic001G401700 Sobic006G217000--Sobic001G401700 Sobic005G014700 Sobic005G014700 Sobic006G217000--Sobic005G014700 Sobic006G217000--Sobic001G120500 Sobic001G166600 Sobic001G166600 Sobic006G217000--Sobic001G166600 Sobic003G345900 Sobic003G345900 Sobic006G217000--Sobic003G345900 Sobic008G067100 Sobic008G067100 Sobic006G217000--Sobic008G067100 Sobic003G369400 Sobic003G369400 Sobic006G217000--Sobic003G369400 Sobic006G088000 Sobic006G088000 Sobic006G217000--Sobic006G088000 Sobic002G343400 Sobic002G343400 Sobic006G217000--Sobic002G343400 Sobic002G316600 Sobic002G316600 Sobic007G103100--Sobic002G316600 Sobic003G186000 Sobic003G186000 Sobic007G103100--Sobic003G186000 Sobic001G194200 Sobic001G194200 Sobic007G103100--Sobic001G194200 Sobic004G291900 Sobic004G291900 Sobic007G103100--Sobic004G291900 Sobic004G276400 Sobic004G276400 Sobic007G103100--Sobic004G276400 Sobic001G527800 Sobic001G527800 Sobic007G103100--Sobic001G527800 Sobic003G205200 Sobic003G205200 Sobic007G103100--Sobic003G205200 Sobic002G275700 Sobic002G275700 Sobic007G103100--Sobic002G275700 Sobic006G055200 Sobic006G055200 Sobic007G103100--Sobic006G055200 Sobic004G171200 Sobic004G171200 Sobic008G051200--Sobic004G171200 Sobic001G251100 Sobic001G251100 Sobic008G051200--Sobic001G251100 Sobic006G125900 Sobic006G125900 Sobic008G051200--Sobic006G125900 Sobic004G185800 Sobic004G185800 Sobic008G051200--Sobic004G185800 Sobic008G051200--Sobic001G493200 Sobic001G089600 Sobic001G089600 Sobic008G051200--Sobic001G089600 Sobic001G453400 Sobic001G453400 Sobic008G051200--Sobic001G453400 Sobic001G393900 Sobic001G393900 Sobic008G051200--Sobic001G393900 Sobic004G030800 Sobic004G030800 Sobic008G051200--Sobic004G030800 Sobic009G056200--Sobic005G172500 Sobic009G056200--Sobic001G194200 Sobic009G056200--Sobic001G227400 Sobic009G056200--Sobic006G055200 Sobic003G195000 Sobic003G195000 Sobic009G056200--Sobic003G195000 Sobic007G207200 Sobic007G207200 Sobic009G056200--Sobic007G207200 Sobic009G056200--Sobic008G063300 Sobic009G056200--Sobic002G142900 Sobic006G055300 Sobic006G055300 Sobic009G056200--Sobic006G055300 Sobic004G026500 Sobic004G026500 Sobic009G193500--Sobic004G026500 Sobic002G339300 Sobic002G339300 Sobic009G193500--Sobic002G339300 Sobic002G276100 Sobic002G276100 Sobic009G193500--Sobic002G276100 Sobic001G124100 Sobic001G124100 Sobic009G193500--Sobic001G124100 Sobic009G193500--Sobic007G103100 Sobic002G168500 Sobic002G168500 Sobic009G193500--Sobic002G168500 Sobic008G172300 Sobic008G172300 Sobic009G193500--Sobic008G172300 Sobic001G219700 Sobic001G219700 Sobic009G193500--Sobic001G219700 Sobic006G186600 Sobic006G186600 Sobic009G193500--Sobic006G186600
Octagon: transcription factors


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