Gene annotation
Transcriptome id Sobic.006G217000.1
Synonym HISN5B, Sb06g028690
Functional annotation imidazoleglycerol-phosphate dehydratase, putative, expressed
UniProt C5YG33
Pfam PF00475
Panther DB PTHR23133 PTHR23133:SF4
NCBI CDD KOG3143; Imidazoleglycerol-phosphate dehydratase
KEGG Orthology K01693; imidazoleglycerol-phosphate dehydratase
Gene Ontology GO:0004424; imidazoleglycerol-phosphate dehydratase activity GO:0000105histidine biosynthetic process


Orthologs (automatic annotation)
TAIR AT4G14910 : HISTIDINE BIOSYNTHESIS 5B
RAP-DB (Rice) LOC_Os04g52710.1 : imidazoleglycerol-phosphate dehydratase, putative, expressed
MaizeGDB (Corn) Zm00025a009756
Brachypodium -
Barley HORVU1Hr1G082430.1 , HORVU1Hr1G082430.2 , HORVU2Hr1G017170.2 , HORVU2Hr1G017170.3 , HORVU2Hr1G017170.4 , HORVU2Hr1G017170.5 , HORVU2Hr1G017170.6 , HORVU2Hr1G017170.7
Wheat TraesCS2D02G459900 , TraesCS2D02G459900 , TraesCS2D02G459900 , TraesCS2B02G481000 , TraesCS2B02G481000 , TraesCS2B02G481000 , TraesCS2B02G481000 , TraesCS2A02G459600 , TraesCS2A02G459600 , TraesCS2A02G459600 , TraesCS2A02G459600
Populus -


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cDNA sequences
Sobic.006G217000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G401700 aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
2 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
3 Sobic.001G120500 toc64, putative, expressed -
4 Sobic.001G166600 semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00145: N-acetyl-gamma-glutamyl-phosphate reductase
5 Sobic.003G345900 histone deacetylase, putative, expressed -
6 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
7 Sobic.003G369400 expressed protein -
8 Sobic.006G088000 translocon Tic40, putative, expressed -
9 Sobic.002G343400 tic20, putative, expressed -
10 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
11 Sobic.004G171200 WD domain, G-beta repeat domain containing protein, expressed K13124: mitogen-activated protein kinase organizer 1
12 Sobic.001G433100 expressed protein -
13 Sobic.008G090900 expressed protein -
14 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
15 Sobic.002G431300 uncharacterized ACR, YagE family COG1723 containing protein, expressed -
16 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
17 Sobic.004G144400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
18 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
19 Sobic.007G207200 phenylalanyl-tRNA synthetase beta chain, putative, expressed K01890: FARSB, phenylalanyl-tRNA synthetase beta chain
20 Sobic.004G236400 AAA family ATPase, putative, expressed -


Gene co-expression network
sample Sobic006G217000 Sobic006G217000 Sobic001G401700 Sobic001G401700 Sobic006G217000--Sobic001G401700 Sobic005G014700 Sobic005G014700 Sobic006G217000--Sobic005G014700 Sobic001G120500 Sobic001G120500 Sobic006G217000--Sobic001G120500 Sobic001G166600 Sobic001G166600 Sobic006G217000--Sobic001G166600 Sobic003G345900 Sobic003G345900 Sobic006G217000--Sobic003G345900 Sobic008G067100 Sobic008G067100 Sobic006G217000--Sobic008G067100 Sobic003G369400 Sobic003G369400 Sobic006G217000--Sobic003G369400 Sobic006G088000 Sobic006G088000 Sobic006G217000--Sobic006G088000 Sobic002G343400 Sobic002G343400 Sobic006G217000--Sobic002G343400 Sobic001G433100 Sobic001G433100 Sobic001G401700--Sobic001G433100 Sobic001G401700--Sobic006G088000 Sobic001G401700--Sobic002G343400 Sobic004G359100 Sobic004G359100 Sobic001G401700--Sobic004G359100 Sobic008G090900 Sobic008G090900 Sobic001G401700--Sobic008G090900 Sobic001G382800 Sobic001G382800 Sobic001G401700--Sobic001G382800 Sobic001G401700--Sobic006G217000 Sobic004G003900 Sobic004G003900 Sobic001G401700--Sobic004G003900 Sobic001G401700--Sobic001G120500 Sobic003G067100 Sobic003G067100 Sobic005G014700--Sobic003G067100 Sobic001G102500 Sobic001G102500 Sobic005G014700--Sobic001G102500 Sobic002G043600 Sobic002G043600 Sobic005G014700--Sobic002G043600 Sobic001G327800 Sobic001G327800 Sobic005G014700--Sobic001G327800 Sobic010G255100 Sobic010G255100 Sobic005G014700--Sobic010G255100 Sobic004G238900 Sobic004G238900 Sobic005G014700--Sobic004G238900 Sobic004G163800 Sobic004G163800 Sobic005G014700--Sobic004G163800 Sobic002G156100 Sobic002G156100 Sobic005G014700--Sobic002G156100 Sobic001G032700 Sobic001G032700 Sobic005G014700--Sobic001G032700 Sobic010G265300 Sobic010G265300 Sobic001G120500--Sobic010G265300 Sobic005G172500 Sobic005G172500 Sobic001G120500--Sobic005G172500 Sobic001G244300 Sobic001G244300 Sobic001G120500--Sobic001G244300 Sobic001G493200 Sobic001G493200 Sobic001G120500--Sobic001G493200 Sobic001G120500--Sobic006G217000 Sobic007G103100 Sobic007G103100 Sobic001G120500--Sobic007G103100 Sobic008G051200 Sobic008G051200 Sobic001G120500--Sobic008G051200 Sobic009G056200 Sobic009G056200 Sobic001G120500--Sobic009G056200 Sobic009G193500 Sobic009G193500 Sobic001G120500--Sobic009G193500 Sobic007G207200 Sobic007G207200 Sobic001G166600--Sobic007G207200 Sobic002G143500 Sobic002G143500 Sobic001G166600--Sobic002G143500 Sobic006G058100 Sobic006G058100 Sobic001G166600--Sobic006G058100 Sobic009G084900 Sobic009G084900 Sobic001G166600--Sobic009G084900 Sobic004G236400 Sobic004G236400 Sobic001G166600--Sobic004G236400 Sobic009G245800 Sobic009G245800 Sobic001G166600--Sobic009G245800 Sobic001G219600 Sobic001G219600 Sobic001G166600--Sobic001G219600 Sobic003G141500 Sobic003G141500 Sobic001G166600--Sobic003G141500 Sobic002G359400 Sobic002G359400 Sobic001G166600--Sobic002G359400 Sobic003G162800 Sobic003G162800 Sobic003G345900--Sobic003G162800 Sobic003G345900--Sobic004G003900 Sobic002G181132 Sobic002G181132 Sobic003G345900--Sobic002G181132 Sobic001G375000 Sobic001G375000 Sobic003G345900--Sobic001G375000 Sobic003G345900--Sobic006G088000 Sobic003G345900--Sobic002G156100 Sobic010G027200 Sobic010G027200 Sobic003G345900--Sobic010G027200 Sobic003G345900--Sobic006G217000 Sobic004G263200 Sobic004G263200 Sobic003G345900--Sobic004G263200 Sobic008G067100--Sobic008G090900 Sobic007G095500 Sobic007G095500 Sobic008G067100--Sobic007G095500 Sobic004G144400 Sobic004G144400 Sobic008G067100--Sobic004G144400 Sobic008G067100--Sobic002G156100 Sobic008G067100--Sobic001G382800 Sobic008G067100--Sobic004G003900 Sobic003G128400 Sobic003G128400 Sobic008G067100--Sobic003G128400 Sobic004G208600 Sobic004G208600 Sobic008G067100--Sobic004G208600 Sobic002G378000 Sobic002G378000 Sobic008G067100--Sobic002G378000 Sobic001G194200 Sobic001G194200 Sobic003G369400--Sobic001G194200 Sobic004G263600 Sobic004G263600 Sobic003G369400--Sobic004G263600 Sobic004G291900 Sobic004G291900 Sobic003G369400--Sobic004G291900 Sobic003G369400--Sobic007G103100 Sobic003G369400--Sobic003G067100 Sobic001G289800 Sobic001G289800 Sobic003G369400--Sobic001G289800 Sobic003G355900 Sobic003G355900 Sobic003G369400--Sobic003G355900 Sobic003G369400--Sobic004G238900 Sobic001G002000 Sobic001G002000 Sobic003G369400--Sobic001G002000 Sobic006G088000--Sobic001G375000 Sobic006G088000--Sobic003G128400 Sobic006G088000--Sobic004G003900 Sobic006G088000--Sobic001G382800 Sobic006G088000--Sobic003G162800 Sobic003G045300 Sobic003G045300 Sobic006G088000--Sobic003G045300 Sobic001G249400 Sobic001G249400 Sobic006G088000--Sobic001G249400 Sobic006G088000--Sobic010G255100 Sobic006G088000--Sobic008G090900 Sobic002G343400--Sobic004G359100 Sobic002G343400--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic002G343400--Sobic003G234900 Sobic002G343400--Sobic001G382800 Sobic002G343400--Sobic001G401700 Sobic002G343400--Sobic001G327800 Sobic002G431300 Sobic002G431300 Sobic002G343400--Sobic002G431300 Sobic002G343400--Sobic004G238900 Sobic002G343400--Sobic003G067100
Octagon: transcription factors


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