Gene annotation
Transcriptome id Sobic.001G433100.3,Sobic.001G433100.4
Synonym Sb01g040740
Functional annotation expressed protein
UniProt A0A1Z5SAF4
Pfam PF11833
Panther DB PTHR33372 PTHR33372:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51140 : Protein of unknown function (DUF3353)
RAP-DB (Rice) LOC_Os03g15033.1 : expressed protein
MaizeGDB (Corn) Zm00025a001641 , Zm00025a052844
Brachypodium KQK22513 , KQK22515 , KQK22514
Barley HORVU0Hr1G008790.1 , HORVU0Hr1G008790.4 , HORVU0Hr1G008790.2 , HORVU0Hr1G008790.3
Wheat TraesCS4D02G220700 , TraesCS4B02G220400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G401700 aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
2 Sobic.007G126900 heat shock protein DnaJ, putative, expressed -
3 Sobic.008G090900 expressed protein -
4 Sobic.006G088000 translocon Tic40, putative, expressed -
5 Sobic.001G478600 uroporphyrinogen III synthase, putative, expressed K01719: hemD, uroporphyrinogen-III synthase
6 Sobic.004G214400 tic20, putative, expressed -
7 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
8 Sobic.001G293300 chaperonin, putative, expressed K04078: groES, chaperonin GroES
9 Sobic.003G345900 histone deacetylase, putative, expressed -
10 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
11 Sobic.006G155100 expressed protein -
12 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
13 Sobic.003G162800 expressed protein -
14 Sobic.006G021800 uncharacterized protein family UPF0016 domain containing protein, expressed -
15 Sobic.001G003900 pentatricopeptide, putative, expressed -
16 Sobic.006G217000 imidazoleglycerol-phosphate dehydratase, putative, expressed K01693: imidazoleglycerol-phosphate dehydratase
17 Sobic.002G343400 tic20, putative, expressed -
18 Sobic.003G045300 cobalt ion transporter, putative, expressed -
19 Sobic.007G049800 nucleolar GTP-binding protein 1, putative, expressed K06943: nucleolar GTP-binding protein
20 Sobic.004G018100 glutamyl-tRNA synthetase, putative, expressed K01885: EARS, glutamyl-tRNA synthetase


Gene co-expression network
sample Sobic001G433100 Sobic001G433100 Sobic001G401700 Sobic001G401700 Sobic001G433100--Sobic001G401700 Sobic007G126900 Sobic007G126900 Sobic001G433100--Sobic007G126900 Sobic008G090900 Sobic008G090900 Sobic001G433100--Sobic008G090900 Sobic006G088000 Sobic006G088000 Sobic001G433100--Sobic006G088000 Sobic001G478600 Sobic001G478600 Sobic001G433100--Sobic001G478600 Sobic004G214400 Sobic004G214400 Sobic001G433100--Sobic004G214400 Sobic004G003900 Sobic004G003900 Sobic001G433100--Sobic004G003900 Sobic001G293300 Sobic001G293300 Sobic001G433100--Sobic001G293300 Sobic003G345900 Sobic003G345900 Sobic001G433100--Sobic003G345900 Sobic001G401700--Sobic001G433100 Sobic001G401700--Sobic006G088000 Sobic002G343400 Sobic002G343400 Sobic001G401700--Sobic002G343400 Sobic004G359100 Sobic004G359100 Sobic001G401700--Sobic004G359100 Sobic001G401700--Sobic008G090900 Sobic001G382800 Sobic001G382800 Sobic001G401700--Sobic001G382800 Sobic006G217000 Sobic006G217000 Sobic001G401700--Sobic006G217000 Sobic001G401700--Sobic004G003900 Sobic001G120500 Sobic001G120500 Sobic001G401700--Sobic001G120500 Sobic007G126900--Sobic001G382800 Sobic007G126900--Sobic001G433100 Sobic002G156100 Sobic002G156100 Sobic007G126900--Sobic002G156100 Sobic007G126900--Sobic001G293300 Sobic003G162800 Sobic003G162800 Sobic007G126900--Sobic003G162800 Sobic001G375000 Sobic001G375000 Sobic007G126900--Sobic001G375000 Sobic001G003900 Sobic001G003900 Sobic007G126900--Sobic001G003900 Sobic007G126900--Sobic002G343400 Sobic010G255100 Sobic010G255100 Sobic007G126900--Sobic010G255100 Sobic008G090900--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic008G090900--Sobic009G092900 Sobic002G181132 Sobic002G181132 Sobic008G090900--Sobic002G181132 Sobic008G090900--Sobic001G382800 Sobic008G067100 Sobic008G067100 Sobic008G090900--Sobic008G067100 Sobic003G045300 Sobic003G045300 Sobic008G090900--Sobic003G045300 Sobic008G090900--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic008G090900--Sobic003G128400 Sobic008G090900--Sobic006G088000 Sobic006G088000--Sobic001G375000 Sobic006G088000--Sobic003G128400 Sobic006G088000--Sobic004G003900 Sobic006G088000--Sobic001G382800 Sobic006G088000--Sobic003G162800 Sobic006G088000--Sobic003G045300 Sobic001G249400 Sobic001G249400 Sobic006G088000--Sobic001G249400 Sobic006G088000--Sobic010G255100 Sobic006G088000--Sobic008G090900 Sobic001G478600--Sobic001G433100 Sobic010G221600 Sobic010G221600 Sobic001G478600--Sobic010G221600 Sobic006G155100 Sobic006G155100 Sobic001G478600--Sobic006G155100 Sobic001G478600--Sobic008G090900 Sobic002G189600 Sobic002G189600 Sobic001G478600--Sobic002G189600 Sobic001G478600--Sobic004G003900 Sobic001G025800 Sobic001G025800 Sobic001G478600--Sobic001G025800 Sobic001G478600--Sobic001G003900 Sobic008G011300 Sobic008G011300 Sobic001G478600--Sobic008G011300 Sobic004G214400--Sobic001G375000 Sobic004G263200 Sobic004G263200 Sobic004G214400--Sobic004G263200 Sobic006G281066 Sobic006G281066 Sobic004G214400--Sobic006G281066 Sobic007G101300 Sobic007G101300 Sobic004G214400--Sobic007G101300 Sobic004G214400--Sobic006G088000 Sobic004G214400--Sobic001G433100 Sobic010G027200 Sobic010G027200 Sobic004G214400--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic004G214400--Sobic006G237100 Sobic004G214400--Sobic004G003900 Sobic004G003900--Sobic001G375000 Sobic004G003900--Sobic008G090900 Sobic004G003900--Sobic003G128400 Sobic004G003900--Sobic009G092900 Sobic004G003900--Sobic002G181132 Sobic004G003900--Sobic003G045300 Sobic004G003900--Sobic003G162800 Sobic004G003900--Sobic006G088000 Sobic004G003900--Sobic001G003900 Sobic001G293300--Sobic001G433100 Sobic001G293300--Sobic007G126900 Sobic001G293300--Sobic004G214400 Sobic001G293300--Sobic002G156100 Sobic003G298400 Sobic003G298400 Sobic001G293300--Sobic003G298400 Sobic006G021800 Sobic006G021800 Sobic001G293300--Sobic006G021800 Sobic001G445200 Sobic001G445200 Sobic001G293300--Sobic001G445200 Sobic001G293300--Sobic001G382800 Sobic001G293300--Sobic008G090900 Sobic003G345900--Sobic003G162800 Sobic003G345900--Sobic004G003900 Sobic003G345900--Sobic002G181132 Sobic003G345900--Sobic001G375000 Sobic003G345900--Sobic006G088000 Sobic003G345900--Sobic002G156100 Sobic003G345900--Sobic010G027200 Sobic003G345900--Sobic006G217000 Sobic003G345900--Sobic004G263200
Octagon: transcription factors


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