Gene annotation
Transcriptome id Sobic.004G018100.1
Synonym ERS, OVA3, ATERS, Sb04g001710
Functional annotation glutamyl-tRNA synthetase, putative, expressed
UniProt C5XT03
Pfam PF00749
Panther DB PTHR11451
NCBI CDD -
KEGG Orthology K01885; EARS, glutamyl-tRNA synthetase
Gene Ontology GO:0016876; aminoacyl-tRNA ligase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G64050 : glutamate tRNA synthetase
RAP-DB (Rice) LOC_Os02g02860.1 : glutamyl-tRNA synthetase, putative, expressed
MaizeGDB (Corn) Zm00025a034913 , Zm00025a018753
Brachypodium KQJ92971
Barley HORVU7Hr1G088740.3 , HORVU6Hr1G012710.8 , HORVU6Hr1G012710.7 , HORVU6Hr1G012710.6 , HORVU6Hr1G012710.5 , HORVU6Hr1G012710.4 , HORVU6Hr1G012710.3 , HORVU6Hr1G012710.2 , HORVU4Hr1G041070.1
Wheat TraesCS6B02G094500 , TraesCS6A02G070500 , TraesCS6D02G068300
Populus PNT21814 , PNT21815 , PNT21816


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cDNA sequences
Sobic.004G018100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G090900 expressed protein -
2 Sobic.003G040000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
3 Sobic.006G021800 uncharacterized protein family UPF0016 domain containing protein, expressed -
4 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
5 Sobic.004G263200 uncharacterized protein At1g26090, chloroplast precursor, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
6 Sobic.002G181132 - -
7 Sobic.007G095500 expressed protein -
8 Sobic.004G214400 tic20, putative, expressed -
9 Sobic.003G345900 histone deacetylase, putative, expressed -
10 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
11 Sobic.003G162800 expressed protein -
12 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
13 Sobic.004G225600 - -
14 Sobic.006G076601 - -
15 Sobic.001G433100 expressed protein -
16 Sobic.004G236400 AAA family ATPase, putative, expressed -
17 Sobic.004G208600 glycine-rich protein, putative, expressed -
18 Sobic.006G088000 translocon Tic40, putative, expressed -
19 Sobic.006G155100 expressed protein -
20 Sobic.001G233700 transmembrane protein-related, putative, expressed -


Gene co-expression network
sample Sobic004G018100 Sobic004G018100 Sobic008G090900 Sobic008G090900 Sobic004G018100--Sobic008G090900 Sobic003G040000 Sobic003G040000 Sobic004G018100--Sobic003G040000 Sobic006G021800 Sobic006G021800 Sobic004G018100--Sobic006G021800 Sobic006G058100 Sobic006G058100 Sobic004G018100--Sobic006G058100 Sobic004G263200 Sobic004G263200 Sobic004G018100--Sobic004G263200 Sobic002G181132 Sobic002G181132 Sobic004G018100--Sobic002G181132 Sobic007G095500 Sobic007G095500 Sobic004G018100--Sobic007G095500 Sobic004G214400 Sobic004G214400 Sobic004G018100--Sobic004G214400 Sobic003G345900 Sobic003G345900 Sobic004G018100--Sobic003G345900 Sobic004G003900 Sobic004G003900 Sobic008G090900--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic008G090900--Sobic009G092900 Sobic008G090900--Sobic002G181132 Sobic001G382800 Sobic001G382800 Sobic008G090900--Sobic001G382800 Sobic008G067100 Sobic008G067100 Sobic008G090900--Sobic008G067100 Sobic003G045300 Sobic003G045300 Sobic008G090900--Sobic003G045300 Sobic001G375000 Sobic001G375000 Sobic008G090900--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic008G090900--Sobic003G128400 Sobic006G088000 Sobic006G088000 Sobic008G090900--Sobic006G088000 Sobic003G040000--Sobic006G058100 Sobic002G293600 Sobic002G293600 Sobic003G040000--Sobic002G293600 Sobic009G127400 Sobic009G127400 Sobic003G040000--Sobic009G127400 Sobic003G162800 Sobic003G162800 Sobic003G040000--Sobic003G162800 Sobic003G327200 Sobic003G327200 Sobic003G040000--Sobic003G327200 Sobic003G434700 Sobic003G434700 Sobic003G040000--Sobic003G434700 Sobic007G076700 Sobic007G076700 Sobic003G040000--Sobic007G076700 Sobic003G149300 Sobic003G149300 Sobic003G040000--Sobic003G149300 Sobic001G022500 Sobic001G022500 Sobic003G040000--Sobic001G022500 Sobic006G021800--Sobic006G088000 Sobic006G021800--Sobic001G382800 Sobic006G021800--Sobic008G090900 Sobic006G021800--Sobic001G375000 Sobic006G021800--Sobic004G214400 Sobic001G433100 Sobic001G433100 Sobic006G021800--Sobic001G433100 Sobic006G021800--Sobic004G018100 Sobic004G249600 Sobic004G249600 Sobic006G021800--Sobic004G249600 Sobic001G293300 Sobic001G293300 Sobic006G021800--Sobic001G293300 Sobic002G143500 Sobic002G143500 Sobic006G058100--Sobic002G143500 Sobic003G067100 Sobic003G067100 Sobic006G058100--Sobic003G067100 Sobic006G058100--Sobic003G040000 Sobic001G166600 Sobic001G166600 Sobic006G058100--Sobic001G166600 Sobic004G236400 Sobic004G236400 Sobic006G058100--Sobic004G236400 Sobic001G261573 Sobic001G261573 Sobic006G058100--Sobic001G261573 Sobic010G176550 Sobic010G176550 Sobic006G058100--Sobic010G176550 Sobic004G225600 Sobic004G225600 Sobic006G058100--Sobic004G225600 Sobic009G094900 Sobic009G094900 Sobic006G058100--Sobic009G094900 Sobic004G263200--Sobic003G162800 Sobic004G263200--Sobic003G327200 Sobic004G263200--Sobic004G003900 Sobic004G263200--Sobic004G214400 Sobic007G101300 Sobic007G101300 Sobic004G263200--Sobic007G101300 Sobic005G197300 Sobic005G197300 Sobic004G263200--Sobic005G197300 Sobic004G263200--Sobic003G128400 Sobic010G027200 Sobic010G027200 Sobic004G263200--Sobic010G027200 Sobic002G140000 Sobic002G140000 Sobic004G263200--Sobic002G140000 Sobic006G166500 Sobic006G166500 Sobic002G181132--Sobic006G166500 Sobic002G181132--Sobic003G045300 Sobic002G181132--Sobic004G003900 Sobic002G181132--Sobic001G375000 Sobic002G181132--Sobic003G162800 Sobic002G181132--Sobic008G090900 Sobic002G181132--Sobic009G092900 Sobic002G181132--Sobic003G345900 Sobic002G156100 Sobic002G156100 Sobic002G181132--Sobic002G156100 Sobic007G095500--Sobic008G067100 Sobic004G208600 Sobic004G208600 Sobic007G095500--Sobic004G208600 Sobic007G095500--Sobic004G225600 Sobic007G095500--Sobic001G382800 Sobic007G095500--Sobic002G293600 Sobic002G343400 Sobic002G343400 Sobic007G095500--Sobic002G343400 Sobic007G095500--Sobic008G090900 Sobic001G494500 Sobic001G494500 Sobic007G095500--Sobic001G494500 Sobic007G095500--Sobic006G058100 Sobic004G214400--Sobic001G375000 Sobic004G214400--Sobic004G263200 Sobic006G281066 Sobic006G281066 Sobic004G214400--Sobic006G281066 Sobic004G214400--Sobic007G101300 Sobic004G214400--Sobic006G088000 Sobic004G214400--Sobic001G433100 Sobic004G214400--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic004G214400--Sobic006G237100 Sobic004G214400--Sobic004G003900 Sobic003G345900--Sobic003G162800 Sobic003G345900--Sobic004G003900 Sobic003G345900--Sobic002G181132 Sobic003G345900--Sobic001G375000 Sobic003G345900--Sobic006G088000 Sobic003G345900--Sobic002G156100 Sobic003G345900--Sobic010G027200 Sobic006G217000 Sobic006G217000 Sobic003G345900--Sobic006G217000 Sobic003G345900--Sobic004G263200
Octagon: transcription factors


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