Gene annotation
Transcriptome id Sobic.007G095500.1
Synonym Sb07g009470
Functional annotation expressed protein
UniProt A0A1B6PGN7
Pfam -
Panther DB PTHR34044
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16080 : -
RAP-DB (Rice) LOC_Os08g16570.1 : expressed protein
MaizeGDB (Corn) Zm00025a030859
Brachypodium KQJ95835
Barley HORVU7Hr1G122750.6 , HORVU7Hr1G122750.7 , HORVU7Hr1G122750.4 , HORVU7Hr1G122750.5 , HORVU7Hr1G122750.2 , HORVU7Hr1G122750.3 , HORVU7Hr1G122750.1 , HORVU7Hr1G122750.8 , HORVU7Hr1G122750.9 , HORVU7Hr1G122750.32 , HORVU7Hr1G122750.30 , HORVU7Hr1G122750.31 , HORVU7Hr1G122750.18 , HORVU7Hr1G122750.19 , HORVU7Hr1G122750.14 , HORVU7Hr1G122750.15 , HORVU7Hr1G122750.16 , HORVU7Hr1G122750.17 , HORVU7Hr1G122750.10 , HORVU7Hr1G122750.11 , HORVU7Hr1G122750.12 , HORVU7Hr1G122750.13 , HORVU7Hr1G122750.21 , HORVU7Hr1G122750.20 , HORVU7Hr1G122750.23 , HORVU7Hr1G122750.22 , HORVU7Hr1G122750.25 , HORVU7Hr1G122750.24 , HORVU7Hr1G122750.27 , HORVU7Hr1G122750.26 , HORVU7Hr1G122750.29 , HORVU7Hr1G122750.28
Wheat TraesCS7D02G543800 , TraesCS7D02G543800 , TraesCS7A02G568800 , TraesCS7A02G568800 , TraesCS6B02G426100
Populus -


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cDNA sequences
Sobic.007G095500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
2 Sobic.004G208600 glycine-rich protein, putative, expressed -
3 Sobic.004G225600 - -
4 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
5 Sobic.002G293600 cysteinyl-tRNA synthetase, putative, expressed K01883: CARS, cysteinyl-tRNA synthetase
6 Sobic.002G343400 tic20, putative, expressed -
7 Sobic.008G090900 expressed protein -
8 Sobic.001G494500 kinase, pfkB family, putative, expressed -
9 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
10 Sobic.002G351900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
11 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
12 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
13 Sobic.001G166600 semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00145: N-acetyl-gamma-glutamyl-phosphate reductase
14 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
15 Sobic.004G018100 glutamyl-tRNA synthetase, putative, expressed K01885: EARS, glutamyl-tRNA synthetase
16 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
18 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
19 Sobic.001G202000 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
20 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -


Gene co-expression network
sample Sobic007G095500 Sobic007G095500 Sobic008G067100 Sobic008G067100 Sobic007G095500--Sobic008G067100 Sobic004G208600 Sobic004G208600 Sobic007G095500--Sobic004G208600 Sobic004G225600 Sobic004G225600 Sobic007G095500--Sobic004G225600 Sobic001G382800 Sobic001G382800 Sobic007G095500--Sobic001G382800 Sobic002G293600 Sobic002G293600 Sobic007G095500--Sobic002G293600 Sobic002G343400 Sobic002G343400 Sobic007G095500--Sobic002G343400 Sobic008G090900 Sobic008G090900 Sobic007G095500--Sobic008G090900 Sobic001G494500 Sobic001G494500 Sobic007G095500--Sobic001G494500 Sobic006G058100 Sobic006G058100 Sobic007G095500--Sobic006G058100 Sobic008G067100--Sobic008G090900 Sobic008G067100--Sobic007G095500 Sobic004G144400 Sobic004G144400 Sobic008G067100--Sobic004G144400 Sobic002G156100 Sobic002G156100 Sobic008G067100--Sobic002G156100 Sobic008G067100--Sobic001G382800 Sobic004G003900 Sobic004G003900 Sobic008G067100--Sobic004G003900 Sobic003G128400 Sobic003G128400 Sobic008G067100--Sobic003G128400 Sobic008G067100--Sobic004G208600 Sobic002G378000 Sobic002G378000 Sobic008G067100--Sobic002G378000 Sobic004G208600--Sobic004G225600 Sobic001G384800 Sobic001G384800 Sobic004G208600--Sobic001G384800 Sobic004G208600--Sobic007G095500 Sobic001G202000 Sobic001G202000 Sobic004G208600--Sobic001G202000 Sobic001G514100 Sobic001G514100 Sobic004G208600--Sobic001G514100 Sobic004G208600--Sobic008G090900 Sobic001G099000 Sobic001G099000 Sobic004G208600--Sobic001G099000 Sobic007G116100 Sobic007G116100 Sobic004G208600--Sobic007G116100 Sobic004G255500 Sobic004G255500 Sobic004G208600--Sobic004G255500 Sobic001G022500 Sobic001G022500 Sobic004G225600--Sobic001G022500 Sobic004G225600--Sobic004G208600 Sobic003G162800 Sobic003G162800 Sobic004G225600--Sobic003G162800 Sobic004G225600--Sobic001G099000 Sobic004G225600--Sobic007G095500 Sobic004G225600--Sobic006G058100 Sobic001G375000 Sobic001G375000 Sobic004G225600--Sobic001G375000 Sobic003G434700 Sobic003G434700 Sobic004G225600--Sobic003G434700 Sobic005G184300 Sobic005G184300 Sobic004G225600--Sobic005G184300 Sobic010G255100 Sobic010G255100 Sobic001G382800--Sobic010G255100 Sobic001G382800--Sobic003G128400 Sobic001G382800--Sobic008G090900 Sobic001G003900 Sobic001G003900 Sobic001G382800--Sobic001G003900 Sobic001G382800--Sobic002G156100 Sobic001G382800--Sobic001G375000 Sobic006G088000 Sobic006G088000 Sobic001G382800--Sobic006G088000 Sobic001G382800--Sobic002G293600 Sobic003G045300 Sobic003G045300 Sobic001G382800--Sobic003G045300 Sobic002G293600--Sobic001G382800 Sobic003G067100 Sobic003G067100 Sobic002G293600--Sobic003G067100 Sobic003G040000 Sobic003G040000 Sobic002G293600--Sobic003G040000 Sobic003G149300 Sobic003G149300 Sobic002G293600--Sobic003G149300 Sobic009G129100 Sobic009G129100 Sobic002G293600--Sobic009G129100 Sobic002G293600--Sobic007G095500 Sobic002G293600--Sobic006G058100 Sobic002G293600--Sobic003G128400 Sobic002G293600--Sobic003G434700 Sobic004G359100 Sobic004G359100 Sobic002G343400--Sobic004G359100 Sobic004G163800 Sobic004G163800 Sobic002G343400--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic002G343400--Sobic003G234900 Sobic002G343400--Sobic001G382800 Sobic001G401700 Sobic001G401700 Sobic002G343400--Sobic001G401700 Sobic001G327800 Sobic001G327800 Sobic002G343400--Sobic001G327800 Sobic002G431300 Sobic002G431300 Sobic002G343400--Sobic002G431300 Sobic004G238900 Sobic004G238900 Sobic002G343400--Sobic004G238900 Sobic002G343400--Sobic003G067100 Sobic008G090900--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic008G090900--Sobic009G092900 Sobic002G181132 Sobic002G181132 Sobic008G090900--Sobic002G181132 Sobic008G090900--Sobic001G382800 Sobic008G090900--Sobic008G067100 Sobic008G090900--Sobic003G045300 Sobic008G090900--Sobic001G375000 Sobic008G090900--Sobic003G128400 Sobic008G090900--Sobic006G088000 Sobic001G494500--Sobic001G514100 Sobic001G494500--Sobic003G128400 Sobic001G494500--Sobic002G156100 Sobic001G494500--Sobic008G067100 Sobic001G494500--Sobic001G375000 Sobic001G494500--Sobic001G202000 Sobic001G494500--Sobic007G095500 Sobic002G043600 Sobic002G043600 Sobic001G494500--Sobic002G043600 Sobic001G494500--Sobic004G225600 Sobic002G143500 Sobic002G143500 Sobic006G058100--Sobic002G143500 Sobic006G058100--Sobic003G067100 Sobic006G058100--Sobic003G040000 Sobic001G166600 Sobic001G166600 Sobic006G058100--Sobic001G166600 Sobic004G236400 Sobic004G236400 Sobic006G058100--Sobic004G236400 Sobic001G261573 Sobic001G261573 Sobic006G058100--Sobic001G261573 Sobic010G176550 Sobic010G176550 Sobic006G058100--Sobic010G176550 Sobic006G058100--Sobic004G225600 Sobic009G094900 Sobic009G094900 Sobic006G058100--Sobic009G094900
Octagon: transcription factors


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