Gene annotation
Transcriptome id Sobic.010G255100.4,Sobic.010G255100.1,Sobic.010G255100.2,Sobic.010G255100.3
Synonym Sb10g029270, HEMB1
Functional annotation delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed
UniProt A0A194YLD5 , A0A194YLI1 , A0A194YMH5 , C6JSJ2 , C6JS05
Pfam PF00490
Panther DB PTHR11458
NCBI CDD -
KEGG Orthology K01698; hemB, porphobilinogen synthase
Gene Ontology GO:0004655; porphobilinogen synthase activity


Orthologs (automatic annotation)
TAIR AT1G69740 : Aldolase superfamily protein
RAP-DB (Rice) LOC_Os06g49110.3,LOC_Os06g49110.1 : delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018407
Brachypodium KQK17445 , KQK17444
Barley HORVU6Hr1G019300.4 , HORVU6Hr1G019300.1 , HORVU6Hr1G019300.3 , HORVU6Hr1G019300.2 , HORVU7Hr1G096300.1 , HORVU7Hr1G096300.2
Wheat TraesCS7A02G415000 , TraesCS7D02G408000 , TraesCS7D02G408000 , TraesCS7D02G408000 , TraesCS7B02G314800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G256600 expressed protein -
2 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
3 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
4 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
5 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
6 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
7 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
8 Sobic.001G308200 cytochrome P450 97B2, putative, expressed K09837: LUT1, carotenoid epsilon hydroxylase
9 Sobic.001G102500 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed K03527: ispH, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
10 Sobic.009G085200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
11 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
13 Sobic.004G359100 expressed protein -
14 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
15 Sobic.002G109000 tetratricopeptide repeat containing protein, putative, expressed -
16 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
17 Sobic.006G088000 translocon Tic40, putative, expressed -
18 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
19 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
20 Sobic.001G309300 expressed protein -


Gene co-expression network
sample Sobic010G255100 Sobic010G255100 Sobic006G256600 Sobic006G256600 Sobic010G255100--Sobic006G256600 Sobic003G085000 Sobic003G085000 Sobic010G255100--Sobic003G085000 Sobic001G382800 Sobic001G382800 Sobic010G255100--Sobic001G382800 Sobic006G055800 Sobic006G055800 Sobic010G255100--Sobic006G055800 Sobic005G014700 Sobic005G014700 Sobic010G255100--Sobic005G014700 Sobic003G128400 Sobic003G128400 Sobic010G255100--Sobic003G128400 Sobic006G210400 Sobic006G210400 Sobic010G255100--Sobic006G210400 Sobic001G308200 Sobic001G308200 Sobic010G255100--Sobic001G308200 Sobic001G102500 Sobic001G102500 Sobic010G255100--Sobic001G102500 Sobic006G256600--Sobic010G255100 Sobic006G256600--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic006G256600--Sobic001G291900 Sobic006G256600--Sobic006G210400 Sobic002G297400 Sobic002G297400 Sobic006G256600--Sobic002G297400 Sobic006G256600--Sobic006G055800 Sobic005G002900 Sobic005G002900 Sobic006G256600--Sobic005G002900 Sobic001G309300 Sobic001G309300 Sobic006G256600--Sobic001G309300 Sobic004G065300 Sobic004G065300 Sobic006G256600--Sobic004G065300 Sobic003G085000--Sobic006G256600 Sobic003G085000--Sobic001G291900 Sobic003G085000--Sobic006G055800 Sobic003G085000--Sobic010G255100 Sobic004G336000 Sobic004G336000 Sobic003G085000--Sobic004G336000 Sobic001G531400 Sobic001G531400 Sobic003G085000--Sobic001G531400 Sobic003G085000--Sobic005G002900 Sobic001G104800 Sobic001G104800 Sobic003G085000--Sobic001G104800 Sobic003G085000--Sobic004G065300 Sobic001G382800--Sobic010G255100 Sobic001G382800--Sobic003G128400 Sobic008G090900 Sobic008G090900 Sobic001G382800--Sobic008G090900 Sobic001G003900 Sobic001G003900 Sobic001G382800--Sobic001G003900 Sobic002G156100 Sobic002G156100 Sobic001G382800--Sobic002G156100 Sobic001G375000 Sobic001G375000 Sobic001G382800--Sobic001G375000 Sobic006G088000 Sobic006G088000 Sobic001G382800--Sobic006G088000 Sobic002G293600 Sobic002G293600 Sobic001G382800--Sobic002G293600 Sobic003G045300 Sobic003G045300 Sobic001G382800--Sobic003G045300 Sobic003G432500 Sobic003G432500 Sobic006G055800--Sobic003G432500 Sobic003G324700 Sobic003G324700 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic001G469933 Sobic001G469933 Sobic006G055800--Sobic001G469933 Sobic001G368500 Sobic001G368500 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic001G083100 Sobic001G083100 Sobic006G055800--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic006G055800--Sobic005G110400 Sobic003G067100 Sobic003G067100 Sobic005G014700--Sobic003G067100 Sobic005G014700--Sobic001G102500 Sobic002G043600 Sobic002G043600 Sobic005G014700--Sobic002G043600 Sobic001G327800 Sobic001G327800 Sobic005G014700--Sobic001G327800 Sobic005G014700--Sobic010G255100 Sobic004G238900 Sobic004G238900 Sobic005G014700--Sobic004G238900 Sobic004G163800 Sobic004G163800 Sobic005G014700--Sobic004G163800 Sobic005G014700--Sobic002G156100 Sobic001G032700 Sobic001G032700 Sobic005G014700--Sobic001G032700 Sobic003G128400--Sobic001G375000 Sobic007G101300 Sobic007G101300 Sobic003G128400--Sobic007G101300 Sobic003G128400--Sobic003G045300 Sobic005G184300 Sobic005G184300 Sobic003G128400--Sobic005G184300 Sobic004G003900 Sobic004G003900 Sobic003G128400--Sobic004G003900 Sobic003G128400--Sobic006G055800 Sobic003G128400--Sobic002G156100 Sobic003G128400--Sobic002G297400 Sobic003G128400--Sobic010G255100 Sobic006G010900 Sobic006G010900 Sobic006G210400--Sobic006G010900 Sobic007G085800 Sobic007G085800 Sobic006G210400--Sobic007G085800 Sobic006G210400--Sobic006G256600 Sobic003G141100 Sobic003G141100 Sobic006G210400--Sobic003G141100 Sobic006G210400--Sobic002G297400 Sobic003G387100 Sobic003G387100 Sobic006G210400--Sobic003G387100 Sobic006G210400--Sobic001G309300 Sobic006G210400--Sobic010G255100 Sobic001G124800 Sobic001G124800 Sobic006G210400--Sobic001G124800 Sobic001G308200--Sobic001G309300 Sobic001G308200--Sobic010G255100 Sobic006G106400 Sobic006G106400 Sobic001G308200--Sobic006G106400 Sobic001G308200--Sobic006G010900 Sobic008G073100 Sobic008G073100 Sobic001G308200--Sobic008G073100 Sobic001G308200--Sobic006G256600 Sobic001G126300 Sobic001G126300 Sobic001G308200--Sobic001G126300 Sobic001G308200--Sobic004G336000 Sobic004G011300 Sobic004G011300 Sobic001G308200--Sobic004G011300 Sobic001G102500--Sobic003G067100 Sobic001G102500--Sobic005G014700 Sobic001G102500--Sobic010G255100 Sobic006G186600 Sobic006G186600 Sobic001G102500--Sobic006G186600 Sobic003G170200 Sobic003G170200 Sobic001G102500--Sobic003G170200 Sobic002G168300 Sobic002G168300 Sobic001G102500--Sobic002G168300 Sobic003G434700 Sobic003G434700 Sobic001G102500--Sobic003G434700 Sobic001G102500--Sobic006G210400 Sobic001G102500--Sobic004G238900
Octagon: transcription factors


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