Gene annotation
Transcriptome id Sobic.001G309300.2,Sobic.001G309300.1
Synonym Sb01g030165
Functional annotation expressed protein
UniProt C5WTH9
Pfam PF12646
Panther DB PTHR35732 PTHR35732:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10405 : -
RAP-DB (Rice) LOC_Os10g39800.1 : expressed protein
MaizeGDB (Corn) Zm00025a003227
Brachypodium -
Barley HORVU1Hr1G052780.3 , HORVU1Hr1G052780.2 , HORVU1Hr1G052780.7 , HORVU1Hr1G052780.6 , HORVU1Hr1G052780.5 , HORVU1Hr1G052780.4 , HORVU1Hr1G052780.9 , HORVU1Hr1G052780.8 , HORVU1Hr1G052780.13 , HORVU1Hr1G052780.12 , HORVU1Hr1G052780.11 , HORVU1Hr1G052780.10
Wheat TraesCS1A02G205600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
2 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
3 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
4 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
5 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
6 Sobic.004G331700 aspartate aminotransferase 5(PubMedID : 26465154)@-(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K00811: aspartate aminotransferase, chloroplastic
7 Sobic.001G291900 expressed protein -
8 Sobic.004G012900 expressed protein -
9 Sobic.001G308200 cytochrome P450 97B2, putative, expressed K09837: LUT1, carotenoid epsilon hydroxylase
10 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
11 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
12 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
13 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
14 Sobic.006G256600 expressed protein -
15 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
16 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
17 Sobic.001G124800 expressed protein -
18 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
19 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
20 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase


Gene co-expression network
sample Sobic001G309300 Sobic001G309300 Sobic008G073100 Sobic008G073100 Sobic001G309300--Sobic008G073100 Sobic004G336000 Sobic004G336000 Sobic001G309300--Sobic004G336000 Sobic009G059300 Sobic009G059300 Sobic001G309300--Sobic009G059300 Sobic003G387100 Sobic003G387100 Sobic001G309300--Sobic003G387100 Sobic005G110400 Sobic005G110400 Sobic001G309300--Sobic005G110400 Sobic004G331700 Sobic004G331700 Sobic001G309300--Sobic004G331700 Sobic001G291900 Sobic001G291900 Sobic001G309300--Sobic001G291900 Sobic004G012900 Sobic004G012900 Sobic001G309300--Sobic004G012900 Sobic001G308200 Sobic001G308200 Sobic001G309300--Sobic001G308200 Sobic008G073100--Sobic005G110400 Sobic001G368500 Sobic001G368500 Sobic008G073100--Sobic001G368500 Sobic002G401800 Sobic002G401800 Sobic008G073100--Sobic002G401800 Sobic008G073100--Sobic003G387100 Sobic004G336200 Sobic004G336200 Sobic008G073100--Sobic004G336200 Sobic008G073100--Sobic001G309300 Sobic003G077400 Sobic003G077400 Sobic008G073100--Sobic003G077400 Sobic002G272100 Sobic002G272100 Sobic008G073100--Sobic002G272100 Sobic006G106400 Sobic006G106400 Sobic008G073100--Sobic006G106400 Sobic004G336000--Sobic001G309300 Sobic001G495200 Sobic001G495200 Sobic004G336000--Sobic001G495200 Sobic004G336000--Sobic008G073100 Sobic004G336000--Sobic001G291900 Sobic003G432500 Sobic003G432500 Sobic004G336000--Sobic003G432500 Sobic006G055800 Sobic006G055800 Sobic004G336000--Sobic006G055800 Sobic004G011300 Sobic004G011300 Sobic004G336000--Sobic004G011300 Sobic003G085000 Sobic003G085000 Sobic004G336000--Sobic003G085000 Sobic004G336000--Sobic003G387100 Sobic009G059300--Sobic003G387100 Sobic009G059300--Sobic004G012900 Sobic010G005500 Sobic010G005500 Sobic009G059300--Sobic010G005500 Sobic006G207800 Sobic006G207800 Sobic009G059300--Sobic006G207800 Sobic008G171300 Sobic008G171300 Sobic009G059300--Sobic008G171300 Sobic009G059300--Sobic001G309300 Sobic007G052400 Sobic007G052400 Sobic009G059300--Sobic007G052400 Sobic009G030900 Sobic009G030900 Sobic009G059300--Sobic009G030900 Sobic009G059300--Sobic008G073100 Sobic003G387100--Sobic009G059300 Sobic003G387100--Sobic004G336200 Sobic003G387100--Sobic008G073100 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic005G110400--Sobic008G073100 Sobic005G110400--Sobic001G368500 Sobic001G126300 Sobic001G126300 Sobic005G110400--Sobic001G126300 Sobic005G110400--Sobic002G401800 Sobic005G110400--Sobic004G336200 Sobic005G110400--Sobic003G387100 Sobic005G143500 Sobic005G143500 Sobic005G110400--Sobic005G143500 Sobic005G110400--Sobic003G077400 Sobic005G110400--Sobic003G432500 Sobic001G102800 Sobic001G102800 Sobic004G331700--Sobic001G102800 Sobic004G331700--Sobic006G207800 Sobic004G331700--Sobic001G309300 Sobic009G237100 Sobic009G237100 Sobic004G331700--Sobic009G237100 Sobic004G331700--Sobic007G052400 Sobic007G009200 Sobic007G009200 Sobic004G331700--Sobic007G009200 Sobic004G331700--Sobic010G005500 Sobic004G331700--Sobic003G387100 Sobic004G331700--Sobic009G059300 Sobic001G291900--Sobic001G368500 Sobic001G104800 Sobic001G104800 Sobic001G291900--Sobic001G104800 Sobic001G291900--Sobic003G085000 Sobic001G291900--Sobic004G336000 Sobic005G002900 Sobic005G002900 Sobic001G291900--Sobic005G002900 Sobic001G291900--Sobic009G059300 Sobic001G291900--Sobic001G309300 Sobic001G291900--Sobic006G055800 Sobic001G291900--Sobic006G106400 Sobic004G012900--Sobic007G052400 Sobic002G233700 Sobic002G233700 Sobic004G012900--Sobic002G233700 Sobic004G012900--Sobic002G401800 Sobic004G012900--Sobic010G005500 Sobic003G378600 Sobic003G378600 Sobic004G012900--Sobic003G378600 Sobic004G012900--Sobic009G059300 Sobic010G277600 Sobic010G277600 Sobic004G012900--Sobic010G277600 Sobic004G012900--Sobic003G387100 Sobic004G012900--Sobic008G171300 Sobic001G308200--Sobic001G309300 Sobic010G255100 Sobic010G255100 Sobic001G308200--Sobic010G255100 Sobic001G308200--Sobic006G106400 Sobic006G010900 Sobic006G010900 Sobic001G308200--Sobic006G010900 Sobic001G308200--Sobic008G073100 Sobic006G256600 Sobic006G256600 Sobic001G308200--Sobic006G256600 Sobic001G308200--Sobic001G126300 Sobic001G308200--Sobic004G336000 Sobic001G308200--Sobic004G011300
Octagon: transcription factors


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