Gene annotation
Transcriptome id Sobic.003G432500.1
Synonym CPFTSY, FRD4, Sb03g046390
Functional annotation Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32 (PubMedID : 28624908)
signal recognition particle receptor, putative, expressed
UniProt C5XIJ9
Pfam PF02881 PF00448
Panther DB PTHR11564 PTHR11564:SF15
NCBI CDD -
KEGG Orthology K03110; fused signal recognition particle receptor
Gene Ontology GO:0006614; SRP-dependent cotranslational protein targeting to membrane GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT2G45770 : signal recognition particle receptor protein, chloroplast (FTSY)
RAP-DB (Rice) LOC_Os01g72800.1 : signal recognition particle receptor, putative, expressed
MaizeGDB (Corn) Zm00025a025915 , Zm00025a025920
Brachypodium KQK11631
Barley HORVU3Hr1G110160.1 , HORVU3Hr1G110160.2 , HORVU3Hr1G110160.3 , HORVU3Hr1G110160.4 , HORVU3Hr1G110160.5 , HORVU3Hr1G110160.6 , HORVU3Hr1G110160.7 , HORVU3Hr1G110160.8 , HORVU3Hr1G110160.9 , HORVU3Hr1G110160.12 , HORVU3Hr1G110160.13 , HORVU3Hr1G110160.10 , HORVU3Hr1G110160.11 , HORVU3Hr1G110160.16 , HORVU3Hr1G110160.14 , HORVU3Hr1G110160.15
Wheat TraesCS3A02G498300 , TraesCS3A02G498300 , TraesCS3A02G498300 , TraesCS3B02G561300 , TraesCSU02G058200 , TraesCSU02G058200 , TraesCSU02G058200
Populus -


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cDNA sequences
Sobic.003G432500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
2 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
3 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
4 Sobic.003G271900 expressed protein -
5 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
6 Sobic.003G324700 expressed protein -
7 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
8 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
9 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
10 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
11 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
12 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
13 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
14 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
15 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
16 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
17 Sobic.002G272100 expressed protein -
18 Sobic.001G309300 expressed protein -
19 Sobic.006G132000 glycine-rich protein, putative, expressed -
20 Sobic.001G291900 expressed protein -


Gene co-expression network
sample Sobic003G432500 Sobic003G432500 Sobic001G368500 Sobic001G368500 Sobic003G432500--Sobic001G368500 Sobic006G055800 Sobic006G055800 Sobic003G432500--Sobic006G055800 Sobic001G469933 Sobic001G469933 Sobic003G432500--Sobic001G469933 Sobic003G271900 Sobic003G271900 Sobic003G432500--Sobic003G271900 Sobic005G110400 Sobic005G110400 Sobic003G432500--Sobic005G110400 Sobic003G324700 Sobic003G324700 Sobic003G432500--Sobic003G324700 Sobic008G073100 Sobic008G073100 Sobic003G432500--Sobic008G073100 Sobic004G336000 Sobic004G336000 Sobic003G432500--Sobic004G336000 Sobic002G152800 Sobic002G152800 Sobic003G432500--Sobic002G152800 Sobic001G368500--Sobic003G324700 Sobic001G368500--Sobic005G110400 Sobic001G368500--Sobic003G432500 Sobic001G368500--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic001G368500--Sobic001G122400 Sobic001G368500--Sobic008G073100 Sobic002G401800 Sobic002G401800 Sobic001G368500--Sobic002G401800 Sobic001G368500--Sobic003G271900 Sobic005G143500 Sobic005G143500 Sobic001G368500--Sobic005G143500 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic005G002900 Sobic005G002900 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic006G055800--Sobic002G152800 Sobic001G083100 Sobic001G083100 Sobic006G055800--Sobic001G083100 Sobic006G055800--Sobic005G110400 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic001G469933--Sobic003G324700 Sobic003G077400 Sobic003G077400 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic003G271900--Sobic001G368500 Sobic003G271900--Sobic003G432500 Sobic002G272100 Sobic002G272100 Sobic003G271900--Sobic002G272100 Sobic003G271900--Sobic005G143500 Sobic003G271900--Sobic003G324700 Sobic003G271900--Sobic006G055800 Sobic008G039600 Sobic008G039600 Sobic003G271900--Sobic008G039600 Sobic003G271900--Sobic005G110400 Sobic006G106400 Sobic006G106400 Sobic003G271900--Sobic006G106400 Sobic005G110400--Sobic008G073100 Sobic005G110400--Sobic001G368500 Sobic001G126300 Sobic001G126300 Sobic005G110400--Sobic001G126300 Sobic005G110400--Sobic002G401800 Sobic004G336200 Sobic004G336200 Sobic005G110400--Sobic004G336200 Sobic003G387100 Sobic003G387100 Sobic005G110400--Sobic003G387100 Sobic005G110400--Sobic005G143500 Sobic005G110400--Sobic003G077400 Sobic005G110400--Sobic003G432500 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic003G324700--Sobic002G152800 Sobic003G386300 Sobic003G386300 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic001G527100 Sobic001G527100 Sobic003G324700--Sobic001G527100 Sobic008G073100--Sobic005G110400 Sobic008G073100--Sobic001G368500 Sobic008G073100--Sobic002G401800 Sobic008G073100--Sobic003G387100 Sobic008G073100--Sobic004G336200 Sobic001G309300 Sobic001G309300 Sobic008G073100--Sobic001G309300 Sobic008G073100--Sobic003G077400 Sobic008G073100--Sobic002G272100 Sobic008G073100--Sobic006G106400 Sobic004G336000--Sobic001G309300 Sobic001G495200 Sobic001G495200 Sobic004G336000--Sobic001G495200 Sobic004G336000--Sobic008G073100 Sobic001G291900 Sobic001G291900 Sobic004G336000--Sobic001G291900 Sobic004G336000--Sobic003G432500 Sobic004G336000--Sobic006G055800 Sobic004G011300 Sobic004G011300 Sobic004G336000--Sobic004G011300 Sobic003G085000 Sobic003G085000 Sobic004G336000--Sobic003G085000 Sobic004G336000--Sobic003G387100 Sobic002G152800--Sobic003G324700 Sobic002G152800--Sobic004G335800 Sobic002G152800--Sobic006G055800 Sobic002G152800--Sobic001G469933 Sobic002G152800--Sobic001G368500 Sobic002G152800--Sobic003G432500 Sobic007G090400 Sobic007G090400 Sobic002G152800--Sobic007G090400 Sobic002G214600 Sobic002G214600 Sobic002G152800--Sobic002G214600 Sobic002G152800--Sobic001G122400
Octagon: transcription factors


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