Gene annotation
Transcriptome id Sobic.006G021600.1,Sobic.006G021600.4,Sobic.006G021600.3,Sobic.006G021600.2
Synonym Sb06g002030
Functional annotation uncharacterized membrane protein, putative, expressed
UniProt A0A1B6PJJ2 , A0A1B6PJK4 , A0A1B6PJJ5 , A0A1Z5RC69
Pfam -
Panther DB PTHR35514 PTHR35514:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52970 : thylakoid lumen 15.0 kDa protein
RAP-DB (Rice) LOC_Os07g34950.1 : uncharacterized membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a012389
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
2 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
3 Sobic.002G274200 expressed protein -
4 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
5 Sobic.002G272100 expressed protein -
6 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
7 Sobic.003G324700 expressed protein -
8 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
9 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
10 Sobic.003G271900 expressed protein -
11 Sobic.002G267900 expressed protein -
12 Sobic.004G335800 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
13 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
14 Sobic.004G012900 expressed protein -
15 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
16 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
17 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
18 Sobic.010G277600 - -
19 Sobic.001G104800 expressed protein -
20 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -


Gene co-expression network
sample Sobic006G021600 Sobic006G021600 Sobic001G368500 Sobic001G368500 Sobic006G021600--Sobic001G368500 Sobic003G432500 Sobic003G432500 Sobic006G021600--Sobic003G432500 Sobic002G274200 Sobic002G274200 Sobic006G021600--Sobic002G274200 Sobic001G469933 Sobic001G469933 Sobic006G021600--Sobic001G469933 Sobic002G272100 Sobic002G272100 Sobic006G021600--Sobic002G272100 Sobic003G077400 Sobic003G077400 Sobic006G021600--Sobic003G077400 Sobic003G324700 Sobic003G324700 Sobic006G021600--Sobic003G324700 Sobic008G073100 Sobic008G073100 Sobic006G021600--Sobic008G073100 Sobic001G122400 Sobic001G122400 Sobic006G021600--Sobic001G122400 Sobic001G368500--Sobic003G324700 Sobic005G110400 Sobic005G110400 Sobic001G368500--Sobic005G110400 Sobic001G368500--Sobic003G432500 Sobic001G368500--Sobic001G469933 Sobic001G368500--Sobic001G122400 Sobic001G368500--Sobic008G073100 Sobic002G401800 Sobic002G401800 Sobic001G368500--Sobic002G401800 Sobic003G271900 Sobic003G271900 Sobic001G368500--Sobic003G271900 Sobic005G143500 Sobic005G143500 Sobic001G368500--Sobic005G143500 Sobic003G432500--Sobic001G368500 Sobic006G055800 Sobic006G055800 Sobic003G432500--Sobic006G055800 Sobic003G432500--Sobic001G469933 Sobic003G432500--Sobic003G271900 Sobic003G432500--Sobic005G110400 Sobic003G432500--Sobic003G324700 Sobic003G432500--Sobic008G073100 Sobic004G336000 Sobic004G336000 Sobic003G432500--Sobic004G336000 Sobic002G152800 Sobic002G152800 Sobic003G432500--Sobic002G152800 Sobic002G274200--Sobic005G110400 Sobic002G274200--Sobic002G272100 Sobic002G274200--Sobic006G021600 Sobic002G274200--Sobic008G073100 Sobic002G405100 Sobic002G405100 Sobic002G274200--Sobic002G405100 Sobic002G274200--Sobic003G077400 Sobic002G274200--Sobic001G368500 Sobic002G274200--Sobic005G143500 Sobic002G274200--Sobic002G401800 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic001G469933--Sobic003G324700 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G083100 Sobic001G083100 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic002G272100--Sobic002G401800 Sobic002G272100--Sobic008G073100 Sobic002G272100--Sobic001G368500 Sobic008G050400 Sobic008G050400 Sobic002G272100--Sobic008G050400 Sobic008G039600 Sobic008G039600 Sobic002G272100--Sobic008G039600 Sobic002G351600 Sobic002G351600 Sobic002G272100--Sobic002G351600 Sobic002G267900 Sobic002G267900 Sobic002G272100--Sobic002G267900 Sobic002G272100--Sobic001G083100 Sobic002G272100--Sobic005G110400 Sobic003G077400--Sobic001G469933 Sobic003G077400--Sobic008G073100 Sobic003G077400--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G077400--Sobic004G012900 Sobic003G077400--Sobic001G368500 Sobic003G077400--Sobic002G401800 Sobic003G387100 Sobic003G387100 Sobic003G077400--Sobic003G387100 Sobic003G160800 Sobic003G160800 Sobic003G077400--Sobic003G160800 Sobic004G336200 Sobic004G336200 Sobic003G077400--Sobic004G336200 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic003G324700--Sobic002G152800 Sobic003G386300 Sobic003G386300 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic001G527100 Sobic001G527100 Sobic003G324700--Sobic001G527100 Sobic008G073100--Sobic005G110400 Sobic008G073100--Sobic001G368500 Sobic008G073100--Sobic002G401800 Sobic008G073100--Sobic003G387100 Sobic008G073100--Sobic004G336200 Sobic001G309300 Sobic001G309300 Sobic008G073100--Sobic001G309300 Sobic008G073100--Sobic003G077400 Sobic008G073100--Sobic002G272100 Sobic006G106400 Sobic006G106400 Sobic008G073100--Sobic006G106400 Sobic001G122400--Sobic003G386300 Sobic001G122400--Sobic004G335800 Sobic001G122400--Sobic001G527100 Sobic001G122400--Sobic003G324700 Sobic001G122400--Sobic001G469933 Sobic001G240000 Sobic001G240000 Sobic001G122400--Sobic001G240000 Sobic001G122400--Sobic001G368500 Sobic002G198000 Sobic002G198000 Sobic001G122400--Sobic002G198000 Sobic001G391400 Sobic001G391400 Sobic001G122400--Sobic001G391400
Octagon: transcription factors


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