Gene annotation
Transcriptome id Sobic.002G267900.1
Synonym Sb02g030190
Functional annotation expressed protein
UniProt C5X614
Pfam PF10693
Panther DB PTHR33833 PTHR33833:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22830 : -
RAP-DB (Rice) LOC_Os04g31010.2 : expressed protein
MaizeGDB (Corn) Zm00025a014372
Brachypodium KQJ91091
Barley HORVU5Hr1G080160.9 , HORVU5Hr1G080160.4 , HORVU5Hr1G080160.6 , HORVU5Hr1G080160.7 , HORVU5Hr1G080160.1 , HORVU5Hr1G080160.2 , HORVU5Hr1G080160.3 , HORVU5Hr1G080160.14 , HORVU5Hr1G080160.12 , HORVU5Hr1G080160.13 , HORVU5Hr1G080160.10 , HORVU5Hr1G080160.11
Wheat TraesCS5B02G309000 , TraesCS5D02G315600 , TraesCS5A02G308600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
2 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
3 Sobic.002G272100 expressed protein -
4 Sobic.010G277600 - -
5 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
6 Sobic.004G326500 PAP fibrillin family domain containing protein, expressed -
7 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
8 Sobic.008G119300 - -
9 Sobic.002G198000 CRR6, putative, expressed -
10 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
11 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
12 Sobic.004G311100 -(PubMedID : 29017446)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
13 Sobic.004G012900 expressed protein -
14 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
15 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
16 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
17 Sobic.001G527100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
18 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
19 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -
20 Sobic.009G131800 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase


Gene co-expression network
sample Sobic002G267900 Sobic002G267900 Sobic008G172700 Sobic008G172700 Sobic002G267900--Sobic008G172700 Sobic004G055000 Sobic004G055000 Sobic002G267900--Sobic004G055000 Sobic002G272100 Sobic002G272100 Sobic002G267900--Sobic002G272100 Sobic010G277600 Sobic010G277600 Sobic002G267900--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic002G267900--Sobic009G183700 Sobic004G326500 Sobic004G326500 Sobic002G267900--Sobic004G326500 Sobic002G401800 Sobic002G401800 Sobic002G267900--Sobic002G401800 Sobic008G119300 Sobic008G119300 Sobic002G267900--Sobic008G119300 Sobic002G198000 Sobic002G198000 Sobic002G267900--Sobic002G198000 Sobic008G172700--Sobic002G267900 Sobic001G350000 Sobic001G350000 Sobic008G172700--Sobic001G350000 Sobic004G239100 Sobic004G239100 Sobic008G172700--Sobic004G239100 Sobic008G172700--Sobic004G055000 Sobic003G378600 Sobic003G378600 Sobic008G172700--Sobic003G378600 Sobic008G172700--Sobic010G277600 Sobic008G172700--Sobic009G183700 Sobic008G171300 Sobic008G171300 Sobic008G172700--Sobic008G171300 Sobic004G359600 Sobic004G359600 Sobic008G172700--Sobic004G359600 Sobic003G275200 Sobic003G275200 Sobic004G055000--Sobic003G275200 Sobic004G154800 Sobic004G154800 Sobic004G055000--Sobic004G154800 Sobic004G055000--Sobic008G172700 Sobic004G055000--Sobic002G267900 Sobic009G131800 Sobic009G131800 Sobic004G055000--Sobic009G131800 Sobic004G055000--Sobic004G326500 Sobic002G351600 Sobic002G351600 Sobic004G055000--Sobic002G351600 Sobic006G108200 Sobic006G108200 Sobic004G055000--Sobic006G108200 Sobic004G055000--Sobic002G272100 Sobic002G272100--Sobic002G401800 Sobic008G073100 Sobic008G073100 Sobic002G272100--Sobic008G073100 Sobic001G368500 Sobic001G368500 Sobic002G272100--Sobic001G368500 Sobic008G050400 Sobic008G050400 Sobic002G272100--Sobic008G050400 Sobic008G039600 Sobic008G039600 Sobic002G272100--Sobic008G039600 Sobic002G272100--Sobic002G351600 Sobic002G272100--Sobic002G267900 Sobic001G083100 Sobic001G083100 Sobic002G272100--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic002G272100--Sobic005G110400 Sobic010G277600--Sobic009G183700 Sobic009G030900 Sobic009G030900 Sobic010G277600--Sobic009G030900 Sobic010G005500 Sobic010G005500 Sobic010G277600--Sobic010G005500 Sobic007G052400 Sobic007G052400 Sobic010G277600--Sobic007G052400 Sobic010G277600--Sobic004G239100 Sobic004G012900 Sobic004G012900 Sobic010G277600--Sobic004G012900 Sobic002G277100 Sobic002G277100 Sobic010G277600--Sobic002G277100 Sobic007G004600 Sobic007G004600 Sobic010G277600--Sobic007G004600 Sobic007G173800 Sobic007G173800 Sobic010G277600--Sobic007G173800 Sobic009G183700--Sobic010G277600 Sobic009G183700--Sobic002G277100 Sobic009G183700--Sobic010G005500 Sobic003G002300 Sobic003G002300 Sobic009G183700--Sobic003G002300 Sobic009G183700--Sobic007G052400 Sobic009G183700--Sobic007G004600 Sobic009G183700--Sobic009G030900 Sobic003G387800 Sobic003G387800 Sobic009G183700--Sobic003G387800 Sobic009G140600 Sobic009G140600 Sobic009G183700--Sobic009G140600 Sobic004G326500--Sobic003G275200 Sobic004G326500--Sobic004G055000 Sobic004G326500--Sobic002G198000 Sobic004G164100 Sobic004G164100 Sobic004G326500--Sobic004G164100 Sobic004G326500--Sobic002G267900 Sobic001G527100 Sobic001G527100 Sobic004G326500--Sobic001G527100 Sobic004G326500--Sobic008G172700 Sobic004G343000 Sobic004G343000 Sobic004G326500--Sobic004G343000 Sobic001G122400 Sobic001G122400 Sobic004G326500--Sobic001G122400 Sobic004G336200 Sobic004G336200 Sobic002G401800--Sobic004G336200 Sobic002G401800--Sobic008G073100 Sobic002G405100 Sobic002G405100 Sobic002G401800--Sobic002G405100 Sobic002G401800--Sobic004G012900 Sobic002G401800--Sobic002G272100 Sobic002G401800--Sobic005G110400 Sobic005G100300 Sobic005G100300 Sobic002G401800--Sobic005G100300 Sobic002G401800--Sobic001G368500 Sobic003G077400 Sobic003G077400 Sobic002G401800--Sobic003G077400 Sobic008G119300--Sobic002G267900 Sobic001G175700 Sobic001G175700 Sobic008G119300--Sobic001G175700 Sobic008G119300--Sobic009G131800 Sobic002G271700 Sobic002G271700 Sobic008G119300--Sobic002G271700 Sobic008G119300--Sobic008G172700 Sobic006G050400 Sobic006G050400 Sobic008G119300--Sobic006G050400 Sobic008G119250 Sobic008G119250 Sobic008G119300--Sobic008G119250 Sobic008G119300--Sobic004G012900 Sobic008G119300--Sobic002G272100 Sobic002G198000--Sobic004G164100 Sobic002G198000--Sobic001G527100 Sobic002G198000--Sobic001G122400 Sobic003G386300 Sobic003G386300 Sobic002G198000--Sobic003G386300 Sobic001G240000 Sobic001G240000 Sobic002G198000--Sobic001G240000 Sobic004G335800 Sobic004G335800 Sobic002G198000--Sobic004G335800 Sobic001G469933 Sobic001G469933 Sobic002G198000--Sobic001G469933 Sobic002G251400 Sobic002G251400 Sobic002G198000--Sobic002G251400 Sobic010G095200 Sobic010G095200 Sobic002G198000--Sobic010G095200
Octagon: transcription factors


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