Gene annotation
Transcriptome id Sobic.004G326500.1
Synonym Sb04g035600
Functional annotation PAP fibrillin family domain containing protein, expressed
UniProt C5XUC9
Pfam PF04755
Panther DB PTHR31906 PTHR31906:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00030 : Plastid-lipid associated protein PAP / fibrillin family protein
RAP-DB (Rice) LOC_Os04g46610.1 : PAP fibrillin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022429
Brachypodium KQJ83947 , KQJ83948
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G326500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G275200 methyltransferase domain containing protein, expressed -
2 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
3 Sobic.002G198000 CRR6, putative, expressed -
4 Sobic.004G164100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.002G267900 expressed protein -
6 Sobic.001G527100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
7 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
8 Sobic.004G343000 RNA recognition motif containing protein, putative, expressed -
9 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
10 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
11 Sobic.009G131800 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
12 Sobic.001G240000 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
13 Sobic.006G108200 expressed protein -
14 Sobic.003G386300 expressed protein -
15 Sobic.001G350000 expressed protein -
16 Sobic.002G272100 expressed protein -
17 Sobic.004G020300 expressed protein -
18 Sobic.010G013700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@high-affinity nickel-transport family protein, putative, expressed -
19 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
20 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -


Gene co-expression network
sample Sobic004G326500 Sobic004G326500 Sobic003G275200 Sobic003G275200 Sobic004G326500--Sobic003G275200 Sobic004G055000 Sobic004G055000 Sobic004G326500--Sobic004G055000 Sobic002G198000 Sobic002G198000 Sobic004G326500--Sobic002G198000 Sobic004G164100 Sobic004G164100 Sobic004G326500--Sobic004G164100 Sobic002G267900 Sobic002G267900 Sobic004G326500--Sobic002G267900 Sobic001G527100 Sobic001G527100 Sobic004G326500--Sobic001G527100 Sobic008G172700 Sobic008G172700 Sobic004G326500--Sobic008G172700 Sobic004G343000 Sobic004G343000 Sobic004G326500--Sobic004G343000 Sobic001G122400 Sobic001G122400 Sobic004G326500--Sobic001G122400 Sobic003G275200--Sobic004G055000 Sobic006G108200 Sobic006G108200 Sobic003G275200--Sobic006G108200 Sobic003G275200--Sobic004G326500 Sobic004G154800 Sobic004G154800 Sobic003G275200--Sobic004G154800 Sobic003G275200--Sobic008G172700 Sobic002G351600 Sobic002G351600 Sobic003G275200--Sobic002G351600 Sobic001G350000 Sobic001G350000 Sobic003G275200--Sobic001G350000 Sobic008G039600 Sobic008G039600 Sobic003G275200--Sobic008G039600 Sobic002G272100 Sobic002G272100 Sobic003G275200--Sobic002G272100 Sobic004G055000--Sobic003G275200 Sobic004G055000--Sobic004G154800 Sobic004G055000--Sobic008G172700 Sobic004G055000--Sobic002G267900 Sobic009G131800 Sobic009G131800 Sobic004G055000--Sobic009G131800 Sobic004G055000--Sobic004G326500 Sobic004G055000--Sobic002G351600 Sobic004G055000--Sobic006G108200 Sobic004G055000--Sobic002G272100 Sobic002G198000--Sobic004G164100 Sobic002G198000--Sobic001G527100 Sobic002G198000--Sobic001G122400 Sobic003G386300 Sobic003G386300 Sobic002G198000--Sobic003G386300 Sobic001G240000 Sobic001G240000 Sobic002G198000--Sobic001G240000 Sobic004G335800 Sobic004G335800 Sobic002G198000--Sobic004G335800 Sobic001G469933 Sobic001G469933 Sobic002G198000--Sobic001G469933 Sobic002G251400 Sobic002G251400 Sobic002G198000--Sobic002G251400 Sobic010G095200 Sobic010G095200 Sobic002G198000--Sobic010G095200 Sobic004G164100--Sobic002G198000 Sobic004G164100--Sobic001G527100 Sobic004G164100--Sobic003G386300 Sobic004G164100--Sobic002G251400 Sobic004G164100--Sobic001G240000 Sobic004G164100--Sobic001G122400 Sobic004G164100--Sobic010G095200 Sobic004G164100--Sobic004G335800 Sobic004G164100--Sobic004G326500 Sobic002G267900--Sobic008G172700 Sobic002G267900--Sobic004G055000 Sobic002G267900--Sobic002G272100 Sobic010G277600 Sobic010G277600 Sobic002G267900--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic002G267900--Sobic009G183700 Sobic002G267900--Sobic004G326500 Sobic002G401800 Sobic002G401800 Sobic002G267900--Sobic002G401800 Sobic008G119300 Sobic008G119300 Sobic002G267900--Sobic008G119300 Sobic002G267900--Sobic002G198000 Sobic001G527100--Sobic001G240000 Sobic001G527100--Sobic001G122400 Sobic001G527100--Sobic002G198000 Sobic001G527100--Sobic004G335800 Sobic001G527100--Sobic003G386300 Sobic001G527100--Sobic004G164100 Sobic001G391400 Sobic001G391400 Sobic001G527100--Sobic001G391400 Sobic001G040000 Sobic001G040000 Sobic001G527100--Sobic001G040000 Sobic003G328200 Sobic003G328200 Sobic001G527100--Sobic003G328200 Sobic008G172700--Sobic002G267900 Sobic008G172700--Sobic001G350000 Sobic004G239100 Sobic004G239100 Sobic008G172700--Sobic004G239100 Sobic008G172700--Sobic004G055000 Sobic003G378600 Sobic003G378600 Sobic008G172700--Sobic003G378600 Sobic008G172700--Sobic010G277600 Sobic008G172700--Sobic009G183700 Sobic008G171300 Sobic008G171300 Sobic008G172700--Sobic008G171300 Sobic004G359600 Sobic004G359600 Sobic008G172700--Sobic004G359600 Sobic004G343000--Sobic009G131800 Sobic004G343000--Sobic004G326500 Sobic004G020300 Sobic004G020300 Sobic004G343000--Sobic004G020300 Sobic004G343000--Sobic004G055000 Sobic004G343000--Sobic003G275200 Sobic004G343000--Sobic004G164100 Sobic003G014100 Sobic003G014100 Sobic004G343000--Sobic003G014100 Sobic001G405700 Sobic001G405700 Sobic004G343000--Sobic001G405700 Sobic004G343000--Sobic002G198000 Sobic001G122400--Sobic003G386300 Sobic001G122400--Sobic004G335800 Sobic001G122400--Sobic001G527100 Sobic003G324700 Sobic003G324700 Sobic001G122400--Sobic003G324700 Sobic001G122400--Sobic001G469933 Sobic001G122400--Sobic001G240000 Sobic001G368500 Sobic001G368500 Sobic001G122400--Sobic001G368500 Sobic001G122400--Sobic002G198000 Sobic001G122400--Sobic001G391400
Octagon: transcription factors


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