Gene annotation
Transcriptome id Sobic.006G106400.1
Synonym Sb06g018930, DEGP8, DEG8
Functional annotation OsDegp5 - Putative Deg protease homologue, expressed
UniProt C5Y9U2
Pfam PF13180 PF13365
Panther DB PTHR22939 PTHR22939:SF99
NCBI CDD KOG1320; Serine protease
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G39830 : Trypsin family protein with PDZ domain
RAP-DB (Rice) LOC_Os04g38640.1 : OsDegp5 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) Zm00025a011125
Brachypodium KQJ82972
Barley HORVU2Hr1G080310.1 , HORVU2Hr1G080310.2
Wheat TraesCS2D02G323700 , TraesCS2B02G342600 , TraesCS2B02G342600 , TraesCS2A02G339400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
2 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
3 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
4 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
5 Sobic.005G143500 aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B
6 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
7 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
8 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
9 Sobic.002G272100 expressed protein -
10 Sobic.001G291900 expressed protein -
11 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
12 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
13 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
14 Sobic.001G126300 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
15 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
16 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
17 Sobic.004G012900 expressed protein -
18 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
19 Sobic.003G271900 expressed protein -
20 Sobic.006G132000 glycine-rich protein, putative, expressed -


Gene co-expression network
sample Sobic006G106400 Sobic006G106400 Sobic004G011300 Sobic004G011300 Sobic006G106400--Sobic004G011300 Sobic008G073100 Sobic008G073100 Sobic006G106400--Sobic008G073100 Sobic008G039600 Sobic008G039600 Sobic006G106400--Sobic008G039600 Sobic001G368500 Sobic001G368500 Sobic006G106400--Sobic001G368500 Sobic005G143500 Sobic005G143500 Sobic006G106400--Sobic005G143500 Sobic002G401800 Sobic002G401800 Sobic006G106400--Sobic002G401800 Sobic001G283700 Sobic001G283700 Sobic006G106400--Sobic001G283700 Sobic009G148500 Sobic009G148500 Sobic006G106400--Sobic009G148500 Sobic002G272100 Sobic002G272100 Sobic006G106400--Sobic002G272100 Sobic004G011300--Sobic006G106400 Sobic004G011300--Sobic009G148500 Sobic001G495200 Sobic001G495200 Sobic004G011300--Sobic001G495200 Sobic004G336000 Sobic004G336000 Sobic004G011300--Sobic004G336000 Sobic002G181000 Sobic002G181000 Sobic004G011300--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic004G011300--Sobic002G043600 Sobic004G011300--Sobic008G039600 Sobic004G011300--Sobic008G073100 Sobic003G301300 Sobic003G301300 Sobic004G011300--Sobic003G301300 Sobic005G110400 Sobic005G110400 Sobic008G073100--Sobic005G110400 Sobic008G073100--Sobic001G368500 Sobic008G073100--Sobic002G401800 Sobic003G387100 Sobic003G387100 Sobic008G073100--Sobic003G387100 Sobic004G336200 Sobic004G336200 Sobic008G073100--Sobic004G336200 Sobic001G309300 Sobic001G309300 Sobic008G073100--Sobic001G309300 Sobic003G077400 Sobic003G077400 Sobic008G073100--Sobic003G077400 Sobic008G073100--Sobic002G272100 Sobic008G073100--Sobic006G106400 Sobic008G039600--Sobic005G143500 Sobic001G083100 Sobic001G083100 Sobic008G039600--Sobic001G083100 Sobic008G039600--Sobic006G106400 Sobic008G039600--Sobic002G401800 Sobic008G039600--Sobic002G272100 Sobic010G002000 Sobic010G002000 Sobic008G039600--Sobic010G002000 Sobic008G039600--Sobic001G368500 Sobic003G094350 Sobic003G094350 Sobic008G039600--Sobic003G094350 Sobic008G039600--Sobic002G181000 Sobic003G324700 Sobic003G324700 Sobic001G368500--Sobic003G324700 Sobic001G368500--Sobic005G110400 Sobic003G432500 Sobic003G432500 Sobic001G368500--Sobic003G432500 Sobic001G469933 Sobic001G469933 Sobic001G368500--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic001G368500--Sobic001G122400 Sobic001G368500--Sobic008G073100 Sobic001G368500--Sobic002G401800 Sobic003G271900 Sobic003G271900 Sobic001G368500--Sobic003G271900 Sobic001G368500--Sobic005G143500 Sobic005G143500--Sobic005G110400 Sobic005G143500--Sobic008G039600 Sobic005G143500--Sobic001G368500 Sobic005G143500--Sobic002G401800 Sobic005G143500--Sobic006G106400 Sobic005G143500--Sobic002G272100 Sobic005G143500--Sobic008G073100 Sobic005G143500--Sobic001G495200 Sobic005G143500--Sobic003G324700 Sobic002G401800--Sobic004G336200 Sobic002G401800--Sobic008G073100 Sobic002G405100 Sobic002G405100 Sobic002G401800--Sobic002G405100 Sobic004G012900 Sobic004G012900 Sobic002G401800--Sobic004G012900 Sobic002G401800--Sobic002G272100 Sobic002G401800--Sobic005G110400 Sobic005G100300 Sobic005G100300 Sobic002G401800--Sobic005G100300 Sobic002G401800--Sobic001G368500 Sobic002G401800--Sobic003G077400 Sobic001G283700--Sobic006G106400 Sobic009G175500 Sobic009G175500 Sobic001G283700--Sobic009G175500 Sobic001G126300 Sobic001G126300 Sobic001G283700--Sobic001G126300 Sobic004G333400 Sobic004G333400 Sobic001G283700--Sobic004G333400 Sobic001G283700--Sobic004G012900 Sobic001G128600 Sobic001G128600 Sobic001G283700--Sobic001G128600 Sobic004G165000 Sobic004G165000 Sobic001G283700--Sobic004G165000 Sobic002G112400 Sobic002G112400 Sobic001G283700--Sobic002G112400 Sobic001G283700--Sobic005G110400 Sobic009G148500--Sobic001G083100 Sobic003G151500 Sobic003G151500 Sobic009G148500--Sobic003G151500 Sobic009G148500--Sobic008G073100 Sobic006G055800 Sobic006G055800 Sobic009G148500--Sobic006G055800 Sobic009G148500--Sobic001G126300 Sobic009G148500--Sobic004G011300 Sobic005G002900 Sobic005G002900 Sobic009G148500--Sobic005G002900 Sobic009G148500--Sobic005G110400 Sobic001G500600 Sobic001G500600 Sobic009G148500--Sobic001G500600 Sobic002G272100--Sobic002G401800 Sobic002G272100--Sobic008G073100 Sobic002G272100--Sobic001G368500 Sobic008G050400 Sobic008G050400 Sobic002G272100--Sobic008G050400 Sobic002G272100--Sobic008G039600 Sobic002G351600 Sobic002G351600 Sobic002G272100--Sobic002G351600 Sobic002G267900 Sobic002G267900 Sobic002G272100--Sobic002G267900 Sobic002G272100--Sobic001G083100 Sobic002G272100--Sobic005G110400
Octagon: transcription factors


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