Gene annotation
Transcriptome id Sobic.006G132000.1
Synonym Sb06g021200
Functional annotation glycine-rich protein, putative, expressed
UniProt A0A1B6PLT2
Pfam -
Panther DB PTHR35483:SF2 PTHR35483
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G43630 : -
RAP-DB (Rice) LOC_Os04g41580.1 : glycine-rich protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ83308 , KQJ83309 , KQJ83313 , KQJ83312 , KQJ83311 , KQJ83310
Barley -
Wheat TraesCS2A02G348700 , TraesCS2A02G348700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G132000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
2 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
3 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
4 Sobic.002G272100 expressed protein -
5 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
6 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
7 Sobic.004G012900 expressed protein -
8 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
9 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
10 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
11 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
12 Sobic.004G165000 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
13 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
14 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
15 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
16 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
17 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
18 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
19 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
20 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G132000 Sobic006G132000 Sobic002G401800 Sobic002G401800 Sobic006G132000--Sobic002G401800 Sobic003G432500 Sobic003G432500 Sobic006G132000--Sobic003G432500 Sobic004G336200 Sobic004G336200 Sobic006G132000--Sobic004G336200 Sobic002G272100 Sobic002G272100 Sobic006G132000--Sobic002G272100 Sobic005G110400 Sobic005G110400 Sobic006G132000--Sobic005G110400 Sobic006G106400 Sobic006G106400 Sobic006G132000--Sobic006G106400 Sobic004G012900 Sobic004G012900 Sobic006G132000--Sobic004G012900 Sobic003G287900 Sobic003G287900 Sobic006G132000--Sobic003G287900 Sobic008G073100 Sobic008G073100 Sobic006G132000--Sobic008G073100 Sobic002G401800--Sobic004G336200 Sobic002G401800--Sobic008G073100 Sobic002G405100 Sobic002G405100 Sobic002G401800--Sobic002G405100 Sobic002G401800--Sobic004G012900 Sobic002G401800--Sobic002G272100 Sobic002G401800--Sobic005G110400 Sobic005G100300 Sobic005G100300 Sobic002G401800--Sobic005G100300 Sobic001G368500 Sobic001G368500 Sobic002G401800--Sobic001G368500 Sobic003G077400 Sobic003G077400 Sobic002G401800--Sobic003G077400 Sobic003G432500--Sobic001G368500 Sobic006G055800 Sobic006G055800 Sobic003G432500--Sobic006G055800 Sobic001G469933 Sobic001G469933 Sobic003G432500--Sobic001G469933 Sobic003G271900 Sobic003G271900 Sobic003G432500--Sobic003G271900 Sobic003G432500--Sobic005G110400 Sobic003G324700 Sobic003G324700 Sobic003G432500--Sobic003G324700 Sobic003G432500--Sobic008G073100 Sobic004G336000 Sobic004G336000 Sobic003G432500--Sobic004G336000 Sobic002G152800 Sobic002G152800 Sobic003G432500--Sobic002G152800 Sobic004G336200--Sobic002G401800 Sobic010G035400 Sobic010G035400 Sobic004G336200--Sobic010G035400 Sobic001G500600 Sobic001G500600 Sobic004G336200--Sobic001G500600 Sobic003G387100 Sobic003G387100 Sobic004G336200--Sobic003G387100 Sobic003G160800 Sobic003G160800 Sobic004G336200--Sobic003G160800 Sobic004G336200--Sobic008G073100 Sobic001G134700 Sobic001G134700 Sobic004G336200--Sobic001G134700 Sobic004G336200--Sobic005G110400 Sobic006G197300 Sobic006G197300 Sobic004G336200--Sobic006G197300 Sobic002G272100--Sobic002G401800 Sobic002G272100--Sobic008G073100 Sobic002G272100--Sobic001G368500 Sobic008G050400 Sobic008G050400 Sobic002G272100--Sobic008G050400 Sobic008G039600 Sobic008G039600 Sobic002G272100--Sobic008G039600 Sobic002G351600 Sobic002G351600 Sobic002G272100--Sobic002G351600 Sobic002G267900 Sobic002G267900 Sobic002G272100--Sobic002G267900 Sobic001G083100 Sobic001G083100 Sobic002G272100--Sobic001G083100 Sobic002G272100--Sobic005G110400 Sobic005G110400--Sobic008G073100 Sobic005G110400--Sobic001G368500 Sobic001G126300 Sobic001G126300 Sobic005G110400--Sobic001G126300 Sobic005G110400--Sobic002G401800 Sobic005G110400--Sobic004G336200 Sobic005G110400--Sobic003G387100 Sobic005G143500 Sobic005G143500 Sobic005G110400--Sobic005G143500 Sobic005G110400--Sobic003G077400 Sobic005G110400--Sobic003G432500 Sobic004G011300 Sobic004G011300 Sobic006G106400--Sobic004G011300 Sobic006G106400--Sobic008G073100 Sobic006G106400--Sobic008G039600 Sobic006G106400--Sobic001G368500 Sobic006G106400--Sobic005G143500 Sobic006G106400--Sobic002G401800 Sobic001G283700 Sobic001G283700 Sobic006G106400--Sobic001G283700 Sobic009G148500 Sobic009G148500 Sobic006G106400--Sobic009G148500 Sobic006G106400--Sobic002G272100 Sobic007G052400 Sobic007G052400 Sobic004G012900--Sobic007G052400 Sobic002G233700 Sobic002G233700 Sobic004G012900--Sobic002G233700 Sobic004G012900--Sobic002G401800 Sobic010G005500 Sobic010G005500 Sobic004G012900--Sobic010G005500 Sobic003G378600 Sobic003G378600 Sobic004G012900--Sobic003G378600 Sobic009G059300 Sobic009G059300 Sobic004G012900--Sobic009G059300 Sobic010G277600 Sobic010G277600 Sobic004G012900--Sobic010G277600 Sobic004G012900--Sobic003G387100 Sobic008G171300 Sobic008G171300 Sobic004G012900--Sobic008G171300 Sobic003G070900 Sobic003G070900 Sobic003G287900--Sobic003G070900 Sobic002G133900 Sobic002G133900 Sobic003G287900--Sobic002G133900 Sobic003G094350 Sobic003G094350 Sobic003G287900--Sobic003G094350 Sobic003G233700 Sobic003G233700 Sobic003G287900--Sobic003G233700 Sobic003G287900--Sobic001G500600 Sobic004G353100 Sobic004G353100 Sobic003G287900--Sobic004G353100 Sobic003G287900--Sobic004G336200 Sobic008G074000 Sobic008G074000 Sobic003G287900--Sobic008G074000 Sobic009G170200 Sobic009G170200 Sobic003G287900--Sobic009G170200 Sobic008G073100--Sobic005G110400 Sobic008G073100--Sobic001G368500 Sobic008G073100--Sobic002G401800 Sobic008G073100--Sobic003G387100 Sobic008G073100--Sobic004G336200 Sobic001G309300 Sobic001G309300 Sobic008G073100--Sobic001G309300 Sobic008G073100--Sobic003G077400 Sobic008G073100--Sobic002G272100 Sobic008G073100--Sobic006G106400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.