Gene annotation
Transcriptome id Sobic.009G148500.1
Synonym Sb09g021290
Functional annotation GTPase of unknown function domain containing protein, putative, expressed
UniProt C5YYC9
Pfam PF01926
Panther DB PTHR11089 PTHR11089:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT4G02790 : GTP-binding family protein
RAP-DB (Rice) LOC_Os05g35540.1 : GTPase of unknown function domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a043867
Brachypodium KQK06094 , KQK06095 , KQK06096 , KQK06092 , KQK06093 , PNT71190 , PNT71191
Barley HORVU1Hr1G074420.8 , HORVU1Hr1G074420.9 , HORVU1Hr1G074420.12 , HORVU1Hr1G074420.2 , HORVU1Hr1G074420.3 , HORVU1Hr1G074420.1 , HORVU1Hr1G074420.6 , HORVU1Hr1G074420.7 , HORVU1Hr1G074420.4 , HORVU1Hr1G074420.5 , HORVU1Hr1G074420.10 , HORVU1Hr1G074420.11 , HORVU1Hr1G074420.13 , HORVU1Hr1G074420.14
Wheat TraesCS1B02G279700 , TraesCS1A02G269200 , TraesCS1D02G269300
Populus -


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cDNA sequences
Sobic.009G148500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
2 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
3 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
4 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
5 Sobic.001G126300 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
6 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
7 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
8 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
9 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
10 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
11 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
12 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
13 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
14 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
15 Sobic.002G406700 tyrosine-specific transport protein, putative, expressed K03834: tyrosine-specific transport protein
16 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
17 Sobic.010G002000 glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed K14164: glycyl-tRNA synthetase
18 Sobic.002G181000 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
19 Sobic.003G085100 MYB family transcription factor, putative, expressed -
20 Sobic.003G077400 peptidase M50 family protein, putative, expressed -


Gene co-expression network
sample Sobic009G148500 Sobic009G148500 Sobic001G083100 Sobic001G083100 Sobic009G148500--Sobic001G083100 Sobic003G151500 Sobic003G151500 Sobic009G148500--Sobic003G151500 Sobic008G073100 Sobic008G073100 Sobic009G148500--Sobic008G073100 Sobic006G055800 Sobic006G055800 Sobic009G148500--Sobic006G055800 Sobic001G126300 Sobic001G126300 Sobic009G148500--Sobic001G126300 Sobic004G011300 Sobic004G011300 Sobic009G148500--Sobic004G011300 Sobic005G002900 Sobic005G002900 Sobic009G148500--Sobic005G002900 Sobic005G110400 Sobic005G110400 Sobic009G148500--Sobic005G110400 Sobic001G500600 Sobic001G500600 Sobic009G148500--Sobic001G500600 Sobic001G083100--Sobic005G002900 Sobic001G083100--Sobic009G148500 Sobic008G039600 Sobic008G039600 Sobic001G083100--Sobic008G039600 Sobic001G469933 Sobic001G469933 Sobic001G083100--Sobic001G469933 Sobic001G083100--Sobic006G055800 Sobic002G272100 Sobic002G272100 Sobic001G083100--Sobic002G272100 Sobic003G372900 Sobic003G372900 Sobic001G083100--Sobic003G372900 Sobic001G054100 Sobic001G054100 Sobic001G083100--Sobic001G054100 Sobic001G083100--Sobic008G073100 Sobic003G151500--Sobic009G148500 Sobic002G406700 Sobic002G406700 Sobic003G151500--Sobic002G406700 Sobic003G432500 Sobic003G432500 Sobic003G151500--Sobic003G432500 Sobic004G336200 Sobic004G336200 Sobic003G151500--Sobic004G336200 Sobic003G151500--Sobic001G126300 Sobic003G151500--Sobic005G110400 Sobic003G151500--Sobic001G083100 Sobic003G151500--Sobic003G372900 Sobic003G151500--Sobic008G073100 Sobic008G073100--Sobic005G110400 Sobic001G368500 Sobic001G368500 Sobic008G073100--Sobic001G368500 Sobic002G401800 Sobic002G401800 Sobic008G073100--Sobic002G401800 Sobic003G387100 Sobic003G387100 Sobic008G073100--Sobic003G387100 Sobic008G073100--Sobic004G336200 Sobic001G309300 Sobic001G309300 Sobic008G073100--Sobic001G309300 Sobic003G077400 Sobic003G077400 Sobic008G073100--Sobic003G077400 Sobic008G073100--Sobic002G272100 Sobic006G106400 Sobic006G106400 Sobic008G073100--Sobic006G106400 Sobic006G055800--Sobic003G432500 Sobic003G324700 Sobic003G324700 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic006G055800--Sobic001G083100 Sobic006G055800--Sobic005G110400 Sobic001G126300--Sobic005G110400 Sobic001G126300--Sobic008G073100 Sobic001G495200 Sobic001G495200 Sobic001G126300--Sobic001G495200 Sobic003G160800 Sobic003G160800 Sobic001G126300--Sobic003G160800 Sobic001G126300--Sobic009G148500 Sobic001G126300--Sobic003G387100 Sobic009G175500 Sobic009G175500 Sobic001G126300--Sobic009G175500 Sobic001G126300--Sobic004G336200 Sobic003G301300 Sobic003G301300 Sobic001G126300--Sobic003G301300 Sobic004G011300--Sobic006G106400 Sobic004G011300--Sobic009G148500 Sobic004G011300--Sobic001G495200 Sobic004G336000 Sobic004G336000 Sobic004G011300--Sobic004G336000 Sobic002G181000 Sobic002G181000 Sobic004G011300--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic004G011300--Sobic002G043600 Sobic004G011300--Sobic008G039600 Sobic004G011300--Sobic008G073100 Sobic004G011300--Sobic003G301300 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic005G002900--Sobic009G148500 Sobic005G002900--Sobic001G469933 Sobic001G291900 Sobic001G291900 Sobic005G002900--Sobic001G291900 Sobic005G002900--Sobic006G106400 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic002G131700 Sobic002G131700 Sobic005G002900--Sobic002G131700 Sobic005G110400--Sobic008G073100 Sobic005G110400--Sobic001G368500 Sobic005G110400--Sobic001G126300 Sobic005G110400--Sobic002G401800 Sobic005G110400--Sobic004G336200 Sobic005G110400--Sobic003G387100 Sobic005G143500 Sobic005G143500 Sobic005G110400--Sobic005G143500 Sobic005G110400--Sobic003G077400 Sobic005G110400--Sobic003G432500 Sobic003G094350 Sobic003G094350 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic006G197300 Sobic006G197300 Sobic001G500600--Sobic006G197300 Sobic003G070900 Sobic003G070900 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic001G500600--Sobic003G232700 Sobic003G287900 Sobic003G287900 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic001G500600--Sobic003G372900
Octagon: transcription factors


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