Gene annotation
Transcriptome id Sobic.003G077400.1,Sobic.003G077400.5,Sobic.003G077400.3,Sobic.003G077400.2,Sobic.003G077400.4
Synonym EGY2, Sb03g006530, ATEGY2
Functional annotation peptidase M50 family protein, putative, expressed
UniProt A0A1W0VW69 , A0A1W0VW24 , C5XQ52 , A0A1W0VW29
Pfam PF02163
Panther DB PTHR31412 PTHR31412:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004222metalloendopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G05740 : ethylene-dependent gravitropism-deficient and yellow-green-like 2
RAP-DB (Rice) LOC_Os01g04900.1,LOC_Os01g04900.3 : peptidase M50 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023501
Brachypodium -
Barley -
Wheat TraesCS3B02G067300 , TraesCS3B02G067300 , TraesCS3A02G055300 , TraesCS3A02G055300 , TraesCS3D02G054600 , TraesCS3D02G054600 , TraesCS3D02G054600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
2 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
3 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
4 Sobic.004G012900 expressed protein -
5 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
6 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
7 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
8 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
9 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
11 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
12 Sobic.002G406700 tyrosine-specific transport protein, putative, expressed K03834: tyrosine-specific transport protein
13 Sobic.002G405100 elongation factor TS family protein, expressed K02357: tsf, elongation factor Ts
14 Sobic.001G126300 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
15 Sobic.002G274200 expressed protein -
16 Sobic.007G052400 rubredoxin family protein, putative, expressed -
17 Sobic.005G100300 OsClp12 - Putative Clp protease homologue, expressed -
18 Sobic.009G055800 expressed protein -
19 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
20 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G077400 Sobic003G077400 Sobic001G469933 Sobic001G469933 Sobic003G077400--Sobic001G469933 Sobic008G073100 Sobic008G073100 Sobic003G077400--Sobic008G073100 Sobic005G110400 Sobic005G110400 Sobic003G077400--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G077400--Sobic004G012900 Sobic001G368500 Sobic001G368500 Sobic003G077400--Sobic001G368500 Sobic002G401800 Sobic002G401800 Sobic003G077400--Sobic002G401800 Sobic003G387100 Sobic003G387100 Sobic003G077400--Sobic003G387100 Sobic003G160800 Sobic003G160800 Sobic003G077400--Sobic003G160800 Sobic004G336200 Sobic004G336200 Sobic003G077400--Sobic004G336200 Sobic001G122400 Sobic001G122400 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic003G324700 Sobic003G324700 Sobic001G469933--Sobic003G324700 Sobic001G469933--Sobic003G077400 Sobic006G055800 Sobic006G055800 Sobic001G469933--Sobic006G055800 Sobic003G432500 Sobic003G432500 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G083100 Sobic001G083100 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic008G073100--Sobic005G110400 Sobic008G073100--Sobic001G368500 Sobic008G073100--Sobic002G401800 Sobic008G073100--Sobic003G387100 Sobic008G073100--Sobic004G336200 Sobic001G309300 Sobic001G309300 Sobic008G073100--Sobic001G309300 Sobic008G073100--Sobic003G077400 Sobic002G272100 Sobic002G272100 Sobic008G073100--Sobic002G272100 Sobic006G106400 Sobic006G106400 Sobic008G073100--Sobic006G106400 Sobic005G110400--Sobic008G073100 Sobic005G110400--Sobic001G368500 Sobic001G126300 Sobic001G126300 Sobic005G110400--Sobic001G126300 Sobic005G110400--Sobic002G401800 Sobic005G110400--Sobic004G336200 Sobic005G110400--Sobic003G387100 Sobic005G143500 Sobic005G143500 Sobic005G110400--Sobic005G143500 Sobic005G110400--Sobic003G077400 Sobic005G110400--Sobic003G432500 Sobic007G052400 Sobic007G052400 Sobic004G012900--Sobic007G052400 Sobic002G233700 Sobic002G233700 Sobic004G012900--Sobic002G233700 Sobic004G012900--Sobic002G401800 Sobic010G005500 Sobic010G005500 Sobic004G012900--Sobic010G005500 Sobic003G378600 Sobic003G378600 Sobic004G012900--Sobic003G378600 Sobic009G059300 Sobic009G059300 Sobic004G012900--Sobic009G059300 Sobic010G277600 Sobic010G277600 Sobic004G012900--Sobic010G277600 Sobic004G012900--Sobic003G387100 Sobic008G171300 Sobic008G171300 Sobic004G012900--Sobic008G171300 Sobic001G368500--Sobic003G324700 Sobic001G368500--Sobic005G110400 Sobic001G368500--Sobic003G432500 Sobic001G368500--Sobic001G469933 Sobic001G368500--Sobic001G122400 Sobic001G368500--Sobic008G073100 Sobic001G368500--Sobic002G401800 Sobic003G271900 Sobic003G271900 Sobic001G368500--Sobic003G271900 Sobic001G368500--Sobic005G143500 Sobic002G401800--Sobic004G336200 Sobic002G401800--Sobic008G073100 Sobic002G405100 Sobic002G405100 Sobic002G401800--Sobic002G405100 Sobic002G401800--Sobic004G012900 Sobic002G401800--Sobic002G272100 Sobic002G401800--Sobic005G110400 Sobic005G100300 Sobic005G100300 Sobic002G401800--Sobic005G100300 Sobic002G401800--Sobic001G368500 Sobic002G401800--Sobic003G077400 Sobic003G387100--Sobic009G059300 Sobic003G387100--Sobic004G336200 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G387100--Sobic003G160800 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic003G160800--Sobic004G336200 Sobic003G160800--Sobic005G100300 Sobic003G160800--Sobic010G035400 Sobic003G160800--Sobic003G387100 Sobic007G103400 Sobic007G103400 Sobic003G160800--Sobic007G103400 Sobic002G112400 Sobic002G112400 Sobic003G160800--Sobic002G112400 Sobic003G233700 Sobic003G233700 Sobic003G160800--Sobic003G233700 Sobic001G134700 Sobic001G134700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500 Sobic004G336200--Sobic002G401800 Sobic004G336200--Sobic010G035400 Sobic001G500600 Sobic001G500600 Sobic004G336200--Sobic001G500600 Sobic004G336200--Sobic003G387100 Sobic004G336200--Sobic003G160800 Sobic004G336200--Sobic008G073100 Sobic004G336200--Sobic001G134700 Sobic004G336200--Sobic005G110400 Sobic006G197300 Sobic006G197300 Sobic004G336200--Sobic006G197300
Octagon: transcription factors


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