Gene annotation
Transcriptome id Sobic.009G055800.2
Synonym SEP1, Sb09g004690
Functional annotation expressed protein
UniProt A0A1Z5R2A9
Pfam -
Panther DB PTHR14154 PTHR14154:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34190 : stress enhanced protein 1
RAP-DB (Rice) LOC_Os10g25570.2 : expressed protein
MaizeGDB (Corn) Zm00025a007042
Brachypodium -
Barley HORVU7Hr1G095100.5 , HORVU7Hr1G095100.2 , HORVU7Hr1G095100.3 , HORVU7Hr1G095100.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G055800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G469900 esterase/lipase/thioesterase, putative, expressed -
2 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
3 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
4 Sobic.009G164300 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
5 Sobic.003G439000 rubredoxin family protein, putative, expressed -
6 Sobic.003G254600 expressed protein -
7 Sobic.008G062500 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
8 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
9 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
10 Sobic.003G408000 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
11 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
12 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
13 Sobic.006G107600 plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed K19032: 30S ribosomal protein 3
14 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.008G116300 expressed protein -
16 Sobic.004G012900 expressed protein -
17 Sobic.001G114700 - -
18 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
19 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
20 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase


Gene co-expression network
sample Sobic009G055800 Sobic009G055800 Sobic001G469900 Sobic001G469900 Sobic009G055800--Sobic001G469900 Sobic001G035800 Sobic001G035800 Sobic009G055800--Sobic001G035800 Sobic003G077400 Sobic003G077400 Sobic009G055800--Sobic003G077400 Sobic009G164300 Sobic009G164300 Sobic009G055800--Sobic009G164300 Sobic003G439000 Sobic003G439000 Sobic009G055800--Sobic003G439000 Sobic003G254600 Sobic003G254600 Sobic009G055800--Sobic003G254600 Sobic008G062500 Sobic008G062500 Sobic009G055800--Sobic008G062500 Sobic001G168800 Sobic001G168800 Sobic009G055800--Sobic001G168800 Sobic001G469933 Sobic001G469933 Sobic009G055800--Sobic001G469933 Sobic001G469900--Sobic003G439000 Sobic001G469900--Sobic009G055800 Sobic001G469900--Sobic001G469933 Sobic001G469900--Sobic001G168800 Sobic004G179200 Sobic004G179200 Sobic001G469900--Sobic004G179200 Sobic001G183000 Sobic001G183000 Sobic001G469900--Sobic001G183000 Sobic001G134700 Sobic001G134700 Sobic001G469900--Sobic001G134700 Sobic003G151500 Sobic003G151500 Sobic001G469900--Sobic003G151500 Sobic001G469900--Sobic003G077400 Sobic001G035800--Sobic009G055800 Sobic001G417200 Sobic001G417200 Sobic001G035800--Sobic001G417200 Sobic004G227200 Sobic004G227200 Sobic001G035800--Sobic004G227200 Sobic001G405700 Sobic001G405700 Sobic001G035800--Sobic001G405700 Sobic006G093900 Sobic006G093900 Sobic001G035800--Sobic006G093900 Sobic001G035800--Sobic003G254600 Sobic003G412900 Sobic003G412900 Sobic001G035800--Sobic003G412900 Sobic001G035800--Sobic003G439000 Sobic001G035800--Sobic001G168800 Sobic003G077400--Sobic001G469933 Sobic008G073100 Sobic008G073100 Sobic003G077400--Sobic008G073100 Sobic005G110400 Sobic005G110400 Sobic003G077400--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G077400--Sobic004G012900 Sobic001G368500 Sobic001G368500 Sobic003G077400--Sobic001G368500 Sobic002G401800 Sobic002G401800 Sobic003G077400--Sobic002G401800 Sobic003G387100 Sobic003G387100 Sobic003G077400--Sobic003G387100 Sobic003G160800 Sobic003G160800 Sobic003G077400--Sobic003G160800 Sobic004G336200 Sobic004G336200 Sobic003G077400--Sobic004G336200 Sobic007G223500 Sobic007G223500 Sobic009G164300--Sobic007G223500 Sobic001G425400 Sobic001G425400 Sobic009G164300--Sobic001G425400 Sobic002G316700 Sobic002G316700 Sobic009G164300--Sobic002G316700 Sobic009G164300--Sobic009G055800 Sobic009G143100 Sobic009G143100 Sobic009G164300--Sobic009G143100 Sobic004G175500 Sobic004G175500 Sobic009G164300--Sobic004G175500 Sobic008G066100 Sobic008G066100 Sobic009G164300--Sobic008G066100 Sobic008G134800 Sobic008G134800 Sobic009G164300--Sobic008G134800 Sobic003G387800 Sobic003G387800 Sobic009G164300--Sobic003G387800 Sobic003G439000--Sobic001G469900 Sobic003G439000--Sobic001G469933 Sobic003G439000--Sobic001G168800 Sobic003G439000--Sobic004G179200 Sobic001G122400 Sobic001G122400 Sobic003G439000--Sobic001G122400 Sobic003G439000--Sobic009G055800 Sobic003G439000--Sobic001G368500 Sobic002G297400 Sobic002G297400 Sobic003G439000--Sobic002G297400 Sobic001G455500 Sobic001G455500 Sobic003G439000--Sobic001G455500 Sobic001G196200 Sobic001G196200 Sobic003G254600--Sobic001G196200 Sobic003G254600--Sobic001G035800 Sobic006G107600 Sobic006G107600 Sobic003G254600--Sobic006G107600 Sobic003G421400 Sobic003G421400 Sobic003G254600--Sobic003G421400 Sobic003G254600--Sobic009G055800 Sobic001G489800 Sobic001G489800 Sobic003G254600--Sobic001G489800 Sobic001G447700 Sobic001G447700 Sobic003G254600--Sobic001G447700 Sobic003G254600--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic003G254600--Sobic007G085800 Sobic008G062500--Sobic003G412900 Sobic008G062500--Sobic009G055800 Sobic008G062500--Sobic003G077400 Sobic008G062500--Sobic003G160800 Sobic003G110700 Sobic003G110700 Sobic008G062500--Sobic003G110700 Sobic008G062500--Sobic007G085800 Sobic008G062500--Sobic001G168800 Sobic008G062500--Sobic003G439000 Sobic008G062500--Sobic009G164300 Sobic001G168800--Sobic003G412900 Sobic001G168800--Sobic003G439000 Sobic001G168800--Sobic001G134700 Sobic001G168800--Sobic003G387100 Sobic001G168800--Sobic004G227200 Sobic003G378600 Sobic003G378600 Sobic001G168800--Sobic003G378600 Sobic006G101500 Sobic006G101500 Sobic001G168800--Sobic006G101500 Sobic001G168800--Sobic001G469900 Sobic001G168800--Sobic007G085800 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic003G324700 Sobic003G324700 Sobic001G469933--Sobic003G324700 Sobic001G469933--Sobic003G077400 Sobic006G055800 Sobic006G055800 Sobic001G469933--Sobic006G055800 Sobic003G432500 Sobic003G432500 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G083100 Sobic001G083100 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400
Octagon: transcription factors


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