Gene annotation
Transcriptome id Sobic.008G116300.1
Synonym Sb08g016990
Functional annotation expressed protein
UniProt C5YPB8
Pfam -
Panther DB PTHR36776 PTHR36776:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03150 : -
RAP-DB (Rice) LOC_Os12g34880.1 : expressed protein
MaizeGDB (Corn) Zm00025a054369
Brachypodium -
Barley HORVU5Hr1G025950.1 , HORVU5Hr1G025950.5
Wheat -
Populus -


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cDNA sequences
Sobic.008G116300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
2 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
3 Sobic.006G101500 expressed protein -
4 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
5 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
6 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
7 Sobic.010G214100 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase
8 Sobic.006G010900 expressed protein -
9 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
10 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
11 Sobic.001G102800 expressed protein -
12 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
13 Sobic.001G391900 nifU, putative, expressed -
14 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
15 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
17 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
18 Sobic.007G052400 rubredoxin family protein, putative, expressed -
19 Sobic.009G055800 expressed protein -
20 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -


Gene co-expression network
sample Sobic008G116300 Sobic008G116300 Sobic003G387100 Sobic003G387100 Sobic008G116300--Sobic003G387100 Sobic007G085800 Sobic007G085800 Sobic008G116300--Sobic007G085800 Sobic006G101500 Sobic006G101500 Sobic008G116300--Sobic006G101500 Sobic002G036000 Sobic002G036000 Sobic008G116300--Sobic002G036000 Sobic003G412900 Sobic003G412900 Sobic008G116300--Sobic003G412900 Sobic001G069000 Sobic001G069000 Sobic008G116300--Sobic001G069000 Sobic010G214100 Sobic010G214100 Sobic008G116300--Sobic010G214100 Sobic006G010900 Sobic006G010900 Sobic008G116300--Sobic006G010900 Sobic003G077400 Sobic003G077400 Sobic008G116300--Sobic003G077400 Sobic009G059300 Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G387100--Sobic004G012900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic006G210400 Sobic006G210400 Sobic007G085800--Sobic006G210400 Sobic007G085800--Sobic006G010900 Sobic007G085800--Sobic003G412900 Sobic007G085800--Sobic008G116300 Sobic007G085800--Sobic001G069000 Sobic007G085800--Sobic003G387100 Sobic007G085800--Sobic010G214100 Sobic001G168800 Sobic001G168800 Sobic007G085800--Sobic001G168800 Sobic001G186200 Sobic001G186200 Sobic007G085800--Sobic001G186200 Sobic006G101500--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic006G101500--Sobic002G102200 Sobic001G183000 Sobic001G183000 Sobic006G101500--Sobic001G183000 Sobic004G211600 Sobic004G211600 Sobic006G101500--Sobic004G211600 Sobic001G134700 Sobic001G134700 Sobic006G101500--Sobic001G134700 Sobic003G431700 Sobic003G431700 Sobic006G101500--Sobic003G431700 Sobic006G101500--Sobic003G412900 Sobic006G093900 Sobic006G093900 Sobic006G101500--Sobic006G093900 Sobic008G006100 Sobic008G006100 Sobic006G101500--Sobic008G006100 Sobic008G053200 Sobic008G053200 Sobic002G036000--Sobic008G053200 Sobic001G102800 Sobic001G102800 Sobic002G036000--Sobic001G102800 Sobic004G308700 Sobic004G308700 Sobic002G036000--Sobic004G308700 Sobic001G519800 Sobic001G519800 Sobic002G036000--Sobic001G519800 Sobic002G036000--Sobic003G431700 Sobic002G036000--Sobic006G101500 Sobic003G443500 Sobic003G443500 Sobic002G036000--Sobic003G443500 Sobic004G272100 Sobic004G272100 Sobic002G036000--Sobic004G272100 Sobic008G066100 Sobic008G066100 Sobic002G036000--Sobic008G066100 Sobic003G412900--Sobic001G069000 Sobic003G412900--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic003G412900--Sobic001G314200 Sobic008G102000 Sobic008G102000 Sobic003G412900--Sobic008G102000 Sobic003G412900--Sobic006G093900 Sobic003G412900--Sobic009G059300 Sobic003G412900--Sobic001G168800 Sobic003G412900--Sobic006G101500 Sobic009G030900 Sobic009G030900 Sobic003G412900--Sobic009G030900 Sobic001G069000--Sobic003G412900 Sobic009G125400 Sobic009G125400 Sobic001G069000--Sobic009G125400 Sobic002G098800 Sobic002G098800 Sobic001G069000--Sobic002G098800 Sobic001G069000--Sobic006G010900 Sobic001G536800 Sobic001G536800 Sobic001G069000--Sobic001G536800 Sobic001G069000--Sobic004G308700 Sobic001G069000--Sobic003G387100 Sobic001G069000--Sobic001G314200 Sobic001G069000--Sobic004G272100 Sobic010G214100--Sobic006G101500 Sobic010G214100--Sobic003G160800 Sobic010G214100--Sobic003G387100 Sobic005G063000 Sobic005G063000 Sobic010G214100--Sobic005G063000 Sobic010G214100--Sobic009G125400 Sobic010G214100--Sobic007G085800 Sobic010G214100--Sobic004G211600 Sobic010G214100--Sobic008G116300 Sobic007G052400 Sobic007G052400 Sobic010G214100--Sobic007G052400 Sobic006G010900--Sobic001G069000 Sobic006G010900--Sobic003G387100 Sobic006G010900--Sobic006G210400 Sobic006G010900--Sobic003G160800 Sobic006G010900--Sobic007G085800 Sobic006G010900--Sobic006G207800 Sobic006G010900--Sobic008G116300 Sobic006G010900--Sobic003G077400 Sobic006G010900--Sobic003G412900 Sobic001G469933 Sobic001G469933 Sobic003G077400--Sobic001G469933 Sobic003G077400--Sobic008G073100 Sobic003G077400--Sobic005G110400 Sobic003G077400--Sobic004G012900 Sobic001G368500 Sobic001G368500 Sobic003G077400--Sobic001G368500 Sobic002G401800 Sobic002G401800 Sobic003G077400--Sobic002G401800 Sobic003G077400--Sobic003G387100 Sobic003G077400--Sobic003G160800 Sobic003G077400--Sobic004G336200
Octagon: transcription factors


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